Protein–RNA interactions for Protein: O43310

CTIF, CBP80/20-dependent translation initiation factor, humanhuman

Known RBP Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTIFO43310 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CTIFO43310 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.27□□□□□ -1.73
CTIFO43310 EIF2AP4-201ENST00000424793 1781 ntBASIC4.27□□□□□ -1.73
CTIFO43310 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
CTIFO43310 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CTIFO43310 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CTIFO43310 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC4.26□□□□□ -1.73
CTIFO43310 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CTIFO43310 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CTIFO43310 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CTIFO43310 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CTIFO43310 AL161781.1-201ENST00000354277 403 ntBASIC4.26□□□□□ -1.73
CTIFO43310 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC4.26□□□□□ -1.73
CTIFO43310 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC4.26□□□□□ -1.73
CTIFO43310 RNU6-769P-201ENST00000384407 104 ntBASIC4.26□□□□□ -1.73
CTIFO43310 RPS3AP23-201ENST00000401762 784 ntBASIC4.26□□□□□ -1.73
CTIFO43310 MTND4LP20-201ENST00000402379 270 ntBASIC4.26□□□□□ -1.73
CTIFO43310 MIR1250-201ENST00000408098 113 ntBASIC4.26□□□□□ -1.73
CTIFO43310 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC4.26□□□□□ -1.73
CTIFO43310 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC4.26□□□□□ -1.73
CTIFO43310 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC4.26□□□□□ -1.73
CTIFO43310 OFD1P18Y-201ENST00000420889 959 ntBASIC4.26□□□□□ -1.73
CTIFO43310 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC4.26□□□□□ -1.73
CTIFO43310 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC4.26□□□□□ -1.73
CTIFO43310 AL157831.1-201ENST00000426134 473 ntBASIC4.26□□□□□ -1.73
CTIFO43310 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.26□□□□□ -1.73
CTIFO43310 Z74696.2-201ENST00000436514 498 ntBASIC4.26□□□□□ -1.73
CTIFO43310 SDCBPP1-201ENST00000440192 890 ntBASIC4.26□□□□□ -1.73
CTIFO43310 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC4.26□□□□□ -1.73
CTIFO43310 GDI2P2-201ENST00000445131 608 ntBASIC4.26□□□□□ -1.73
CTIFO43310 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC4.26□□□□□ -1.73
CTIFO43310 PDSS1P2-201ENST00000449397 678 ntBASIC4.26□□□□□ -1.73
CTIFO43310 AP001025.2-201ENST00000490908 477 ntBASIC4.26□□□□□ -1.73
CTIFO43310 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.26□□□□□ -1.73
CTIFO43310 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC4.26□□□□□ -1.73
CTIFO43310 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC4.26□□□□□ -1.73
CTIFO43310 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC4.26□□□□□ -1.73
CTIFO43310 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CTIFO43310 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC4.26□□□□□ -1.73
CTIFO43310 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4.26□□□□□ -1.73
CTIFO43310 AC024224.1-201ENST00000538284 609 ntBASIC4.26□□□□□ -1.73
CTIFO43310 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC4.26□□□□□ -1.73
CTIFO43310 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC4.26□□□□□ -1.73
CTIFO43310 CENPUP2-201ENST00000555897 1186 ntBASIC4.26□□□□□ -1.73
CTIFO43310 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC4.26□□□□□ -1.73
CTIFO43310 AC005771.1-201ENST00000585581 349 ntBASIC4.26□□□□□ -1.73
CTIFO43310 AC008782.1-201ENST00000603386 430 ntBASIC4.26□□□□□ -1.73
CTIFO43310 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CTIFO43310 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CTIFO43310 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CTIFO43310 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC4.26□□□□□ -1.73
CTIFO43310 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CTIFO43310 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC4.26□□□□□ -1.73
CTIFO43310 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.26□□□□□ -1.73
CTIFO43310 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.26□□□□□ -1.73
CTIFO43310 PABPC1P7-201ENST00000413177 1513 ntBASIC4.26□□□□□ -1.73
CTIFO43310 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC4.25□□□□□ -1.73
CTIFO43310 TEX21P-201ENST00000447107 1476 ntBASIC4.25□□□□□ -1.73
CTIFO43310 AC058791.1-201ENST00000608412 3198 ntBASIC4.25□□□□□ -1.73
CTIFO43310 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CTIFO43310 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
CTIFO43310 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
CTIFO43310 RN7SKP44-201ENST00000363602 316 ntBASIC4.25□□□□□ -1.73
CTIFO43310 RNU6-343P-201ENST00000364709 104 ntBASIC4.25□□□□□ -1.73
CTIFO43310 RNU6-744P-201ENST00000365557 107 ntBASIC4.25□□□□□ -1.73
CTIFO43310 RNU6-1316P-201ENST00000384242 108 ntBASIC4.25□□□□□ -1.73
CTIFO43310 SNORA70E-201ENST00000384492 135 ntBASIC4.25□□□□□ -1.73
CTIFO43310 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
CTIFO43310 RNA5SP397-201ENST00000391323 118 ntBASIC4.25□□□□□ -1.73
CTIFO43310 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC4.25□□□□□ -1.73
CTIFO43310 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC4.25□□□□□ -1.73
CTIFO43310 Z97055.1-201ENST00000419730 712 ntBASIC4.25□□□□□ -1.73
CTIFO43310 B3GALNT1P1-201ENST00000420569 975 ntBASIC4.25□□□□□ -1.73
CTIFO43310 MTCYBP5-201ENST00000423752 1135 ntBASIC4.25□□□□□ -1.73
CTIFO43310 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CTIFO43310 RSU1P2-202ENST00000437884 485 ntBASIC4.25□□□□□ -1.73
CTIFO43310 RPL7P36-201ENST00000444633 681 ntBASIC4.25□□□□□ -1.73
CTIFO43310 MTND1P1-201ENST00000445453 368 ntBASIC4.25□□□□□ -1.73
CTIFO43310 USP9YP12-201ENST00000450481 570 ntBASIC4.25□□□□□ -1.73
CTIFO43310 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC4.25□□□□□ -1.73
CTIFO43310 HMGB1P36-201ENST00000487709 576 ntBASIC4.25□□□□□ -1.73
CTIFO43310 OR5H5P-201ENST00000503164 928 ntBASIC4.25□□□□□ -1.73
CTIFO43310 PDLIM1P4-201ENST00000504327 1006 ntBASIC4.25□□□□□ -1.73
CTIFO43310 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CTIFO43310 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC4.25□□□□□ -1.73
CTIFO43310 CDC42P4-201ENST00000510507 563 ntBASIC4.25□□□□□ -1.73
CTIFO43310 HIGD1AP3-201ENST00000515857 278 ntBASIC4.25□□□□□ -1.73
CTIFO43310 RNU6-405P-201ENST00000516637 110 ntBASIC4.25□□□□□ -1.73
CTIFO43310 RN7SKP60-201ENST00000516985 239 ntBASIC4.25□□□□□ -1.73
CTIFO43310 AP002748.2-201ENST00000528671 348 ntBASIC4.25□□□□□ -1.73
CTIFO43310 MAL2-203ENST00000534619 578 ntTSL 4 BASIC4.25□□□□□ -1.73
CTIFO43310 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC4.25□□□□□ -1.73
CTIFO43310 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC4.25□□□□□ -1.73
CTIFO43310 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC4.25□□□□□ -1.73
CTIFO43310 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC4.25□□□□□ -1.73
CTIFO43310 AC090877.1-201ENST00000561418 344 ntBASIC4.25□□□□□ -1.73
CTIFO43310 HNRNPCP4-201ENST00000571636 900 ntBASIC4.25□□□□□ -1.73
CTIFO43310 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC4.25□□□□□ -1.73
CTIFO43310 MIR5697-201ENST00000578045 78 ntBASIC4.25□□□□□ -1.73
CTIFO43310 AL353997.4-201ENST00000586196 166 ntBASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 110.8 ms