Protein–RNA interactions for Protein: O43300

LRRTM2, Leucine-rich repeat transmembrane neuronal protein 2, humanhuman

Predictions only

Length 516 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM2O43300 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
LRRTM2O43300 USP9YP25-201ENST00000457708 443 ntBASIC3.32□□□□□ -1.88
LRRTM2O43300 RN7SL807P-201ENST00000470923 297 ntBASIC3.32□□□□□ -1.88
LRRTM2O43300 FCF1P3-201ENST00000496394 590 ntBASIC3.32□□□□□ -1.88
LRRTM2O43300 AC108941.1-201ENST00000502853 530 ntBASIC3.32□□□□□ -1.88
LRRTM2O43300 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC3.32□□□□□ -1.88
LRRTM2O43300 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC3.32□□□□□ -1.88
LRRTM2O43300 PCBP2P3-201ENST00000509726 843 ntBASIC3.32□□□□□ -1.88
LRRTM2O43300 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.32□□□□□ -1.88
LRRTM2O43300 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
LRRTM2O43300 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC3.32□□□□□ -1.88
LRRTM2O43300 SNORA48.10-201ENST00000516965 160 ntBASIC3.32□□□□□ -1.88
LRRTM2O43300 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC3.32□□□□□ -1.88
LRRTM2O43300 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC3.32□□□□□ -1.88
LRRTM2O43300 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
LRRTM2O43300 AL121603.1-201ENST00000553815 142 ntBASIC3.32□□□□□ -1.88
LRRTM2O43300 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC3.32□□□□□ -1.88
LRRTM2O43300 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.32□□□□□ -1.88
LRRTM2O43300 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.32□□□□□ -1.88
LRRTM2O43300 AC074051.3-201ENST00000570238 358 ntBASIC3.32□□□□□ -1.88
LRRTM2O43300 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC3.32□□□□□ -1.88
LRRTM2O43300 SNORD39.3-201ENST00000584451 71 ntBASIC3.32□□□□□ -1.88
LRRTM2O43300 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC3.32□□□□□ -1.88
LRRTM2O43300 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC3.32□□□□□ -1.88
LRRTM2O43300 AP001029.3-201ENST00000588063 596 ntBASIC3.32□□□□□ -1.88
LRRTM2O43300 AL365503.1-201ENST00000605247 905 ntBASIC3.32□□□□□ -1.88
LRRTM2O43300 AC128687.1-201ENST00000605304 619 ntBASIC3.32□□□□□ -1.88
LRRTM2O43300 AC091946.2-201ENST00000606105 291 ntBASIC3.32□□□□□ -1.88
LRRTM2O43300 AC018755.4-201ENST00000619715 454 ntBASIC3.32□□□□□ -1.88
LRRTM2O43300 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC3.32□□□□□ -1.88
LRRTM2O43300 SNORA50A-202ENST00000629536 136 ntBASIC3.32□□□□□ -1.88
LRRTM2O43300 MKKS-204ENST00000639674 192 ntBASIC3.32□□□□□ -1.88
LRRTM2O43300 AC092326.2-201ENST00000624772 1561 ntBASIC3.32□□□□□ -1.88
LRRTM2O43300 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
LRRTM2O43300 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
LRRTM2O43300 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.32□□□□□ -1.88
LRRTM2O43300 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
LRRTM2O43300 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
LRRTM2O43300 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
LRRTM2O43300 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
LRRTM2O43300 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
LRRTM2O43300 AC007656.2-201ENST00000624902 4547 ntBASIC3.32□□□□□ -1.88
LRRTM2O43300 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
LRRTM2O43300 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
LRRTM2O43300 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
LRRTM2O43300 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
LRRTM2O43300 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
LRRTM2O43300 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.31□□□□□ -1.88
LRRTM2O43300 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
LRRTM2O43300 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
LRRTM2O43300 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
LRRTM2O43300 RIOK3P1-201ENST00000418778 1528 ntBASIC3.31□□□□□ -1.88
LRRTM2O43300 RNU6-560P-201ENST00000364007 108 ntBASIC3.31□□□□□ -1.88
LRRTM2O43300 SNORA38.1-201ENST00000364172 131 ntBASIC3.31□□□□□ -1.88
LRRTM2O43300 ESD-201ENST00000378697 1079 ntTSL 5 BASIC3.31□□□□□ -1.88
LRRTM2O43300 RNU6-83P-201ENST00000384568 112 ntBASIC3.31□□□□□ -1.88
LRRTM2O43300 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
LRRTM2O43300 MTND4P13-201ENST00000402078 1023 ntBASIC3.31□□□□□ -1.88
LRRTM2O43300 AL121978.1-201ENST00000402778 359 ntBASIC3.31□□□□□ -1.88
LRRTM2O43300 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC3.31□□□□□ -1.88
LRRTM2O43300 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
LRRTM2O43300 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.31□□□□□ -1.88
LRRTM2O43300 RPL17P49-201ENST00000443728 411 ntBASIC3.31□□□□□ -1.88
LRRTM2O43300 AC007327.1-201ENST00000447461 264 ntBASIC3.31□□□□□ -1.88
LRRTM2O43300 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC3.31□□□□□ -1.88
LRRTM2O43300 AC104308.1-201ENST00000454621 333 ntBASIC3.31□□□□□ -1.88
LRRTM2O43300 AP001486.1-201ENST00000463339 476 ntBASIC3.31□□□□□ -1.88
LRRTM2O43300 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC3.31□□□□□ -1.88
LRRTM2O43300 AL049873.1-201ENST00000480540 376 ntBASIC3.31□□□□□ -1.88
LRRTM2O43300 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.31□□□□□ -1.88
LRRTM2O43300 AP000563.1-201ENST00000490865 758 ntBASIC3.31□□□□□ -1.88
LRRTM2O43300 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
LRRTM2O43300 BOLA3P3-201ENST00000505182 232 ntBASIC3.31□□□□□ -1.88
LRRTM2O43300 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
LRRTM2O43300 MTCYBP37-201ENST00000510642 1133 ntBASIC3.31□□□□□ -1.88
LRRTM2O43300 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.31□□□□□ -1.88
LRRTM2O43300 AC103843.2-201ENST00000530523 682 ntBASIC3.31□□□□□ -1.88
LRRTM2O43300 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.31□□□□□ -1.88
LRRTM2O43300 TRAV15-201ENST00000556680 249 ntBASIC3.31□□□□□ -1.88
LRRTM2O43300 AC090695.1-201ENST00000561269 1222 ntBASIC3.31□□□□□ -1.88
LRRTM2O43300 AC093519.1-201ENST00000566109 298 ntBASIC3.31□□□□□ -1.88
LRRTM2O43300 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC3.31□□□□□ -1.88
LRRTM2O43300 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC3.31□□□□□ -1.88
LRRTM2O43300 AC099778.2-201ENST00000610904 211 ntBASIC3.31□□□□□ -1.88
LRRTM2O43300 AC013470.4-201ENST00000619978 986 ntBASIC3.31□□□□□ -1.88
LRRTM2O43300 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC3.31□□□□□ -1.88
LRRTM2O43300 AC011330.2-201ENST00000621680 635 ntBASIC3.31□□□□□ -1.88
LRRTM2O43300 AL512506.2-201ENST00000624472 458 ntBASIC3.31□□□□□ -1.88
LRRTM2O43300 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.31□□□□□ -1.88
LRRTM2O43300 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
LRRTM2O43300 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
LRRTM2O43300 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
LRRTM2O43300 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.31□□□□□ -1.88
LRRTM2O43300 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
LRRTM2O43300 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.3□□□□□ -1.88
LRRTM2O43300 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
LRRTM2O43300 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.3□□□□□ -1.88
LRRTM2O43300 AL049781.1-201ENST00000623195 3585 ntBASIC3.3□□□□□ -1.88
LRRTM2O43300 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
LRRTM2O43300 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms