Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 OR5AQ1P-201ENST00000527596 927 ntBASIC4.8□□□□□ -1.64
FOXN1O15353 DEFB109D-201ENST00000529497 240 ntBASIC4.8□□□□□ -1.64
FOXN1O15353 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC4.8□□□□□ -1.64
FOXN1O15353 AC006064.5-201ENST00000541782 248 ntBASIC4.8□□□□□ -1.64
FOXN1O15353 AC087499.8-201ENST00000578406 226 ntBASIC4.8□□□□□ -1.64
FOXN1O15353 AC005498.1-201ENST00000592125 465 ntBASIC4.8□□□□□ -1.64
FOXN1O15353 AC233280.2-201ENST00000603917 1070 ntBASIC4.8□□□□□ -1.64
FOXN1O15353 BNIP3P4-201ENST00000604946 565 ntBASIC4.8□□□□□ -1.64
FOXN1O15353 MIR432-201ENST00000606207 94 ntBASIC4.8□□□□□ -1.64
FOXN1O15353 AC107214.2-201ENST00000608204 634 ntBASIC4.8□□□□□ -1.64
FOXN1O15353 AC135507.2-201ENST00000612443 309 ntBASIC4.8□□□□□ -1.64
FOXN1O15353 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC4.8□□□□□ -1.64
FOXN1O15353 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC4.8□□□□□ -1.64
FOXN1O15353 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC4.8□□□□□ -1.64
FOXN1O15353 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
FOXN1O15353 MIR6863-201ENST00000636112 90 ntBASIC4.8□□□□□ -1.64
FOXN1O15353 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
FOXN1O15353 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
FOXN1O15353 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
FOXN1O15353 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
FOXN1O15353 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
FOXN1O15353 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.8□□□□□ -1.64
FOXN1O15353 AC068254.2-201ENST00000623938 3577 ntBASIC4.8□□□□□ -1.64
FOXN1O15353 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
FOXN1O15353 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
FOXN1O15353 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC4.8□□□□□ -1.64
FOXN1O15353 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
FOXN1O15353 Z95327.2-201ENST00000414579 1873 ntBASIC4.79□□□□□ -1.64
FOXN1O15353 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
FOXN1O15353 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.79□□□□□ -1.64
FOXN1O15353 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
FOXN1O15353 RPL21P132-201ENST00000331267 462 ntBASIC4.79□□□□□ -1.64
FOXN1O15353 Y_RNA.160-201ENST00000363677 92 ntBASIC4.79□□□□□ -1.64
FOXN1O15353 Y_RNA.162-201ENST00000363683 102 ntBASIC4.79□□□□□ -1.64
FOXN1O15353 RNU6-1090P-201ENST00000364065 94 ntBASIC4.79□□□□□ -1.64
FOXN1O15353 Y_RNA.263-201ENST00000364659 114 ntBASIC4.79□□□□□ -1.64
FOXN1O15353 MIR525-201ENST00000384978 85 ntBASIC4.79□□□□□ -1.64
FOXN1O15353 SNORA40.3-201ENST00000390964 122 ntBASIC4.79□□□□□ -1.64
FOXN1O15353 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
FOXN1O15353 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
FOXN1O15353 RN7SKP285-201ENST00000410137 318 ntBASIC4.79□□□□□ -1.64
FOXN1O15353 HSPE1P12-201ENST00000412576 301 ntBASIC4.79□□□□□ -1.64
FOXN1O15353 RPS20P15-201ENST00000412792 311 ntBASIC4.79□□□□□ -1.64
FOXN1O15353 AC013404.1-201ENST00000413068 249 ntBASIC4.79□□□□□ -1.64
FOXN1O15353 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC4.79□□□□□ -1.64
FOXN1O15353 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC4.79□□□□□ -1.64
FOXN1O15353 RPL21P111-201ENST00000418453 477 ntBASIC4.79□□□□□ -1.64
FOXN1O15353 AIMP1P1-201ENST00000418670 937 ntBASIC4.79□□□□□ -1.64
FOXN1O15353 AL035423.1-201ENST00000420331 213 ntBASIC4.79□□□□□ -1.64
FOXN1O15353 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC4.79□□□□□ -1.64
FOXN1O15353 AF228730.4-201ENST00000421457 183 ntBASIC4.79□□□□□ -1.64
FOXN1O15353 AC008850.1-201ENST00000427546 362 ntBASIC4.79□□□□□ -1.64
FOXN1O15353 OFD1P12Y-201ENST00000427963 1207 ntBASIC4.79□□□□□ -1.64
FOXN1O15353 ELOCP14-201ENST00000428070 331 ntBASIC4.79□□□□□ -1.64
FOXN1O15353 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC4.79□□□□□ -1.64
FOXN1O15353 RPL31P54-201ENST00000429803 370 ntBASIC4.79□□□□□ -1.64
FOXN1O15353 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.79□□□□□ -1.64
FOXN1O15353 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC4.79□□□□□ -1.64
FOXN1O15353 AL450263.2-201ENST00000439400 589 ntBASIC4.79□□□□□ -1.64
FOXN1O15353 ELOCP7-201ENST00000439968 331 ntBASIC4.79□□□□□ -1.64
FOXN1O15353 RPS4XP4-201ENST00000443195 763 ntBASIC4.79□□□□□ -1.64
FOXN1O15353 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC4.79□□□□□ -1.64
FOXN1O15353 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.79□□□□□ -1.64
FOXN1O15353 RPS4XP10-201ENST00000465034 731 ntBASIC4.79□□□□□ -1.64
FOXN1O15353 RN7SL601P-201ENST00000471221 293 ntBASIC4.79□□□□□ -1.64
FOXN1O15353 AC025554.1-201ENST00000505641 188 ntBASIC4.79□□□□□ -1.64
FOXN1O15353 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
FOXN1O15353 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC4.79□□□□□ -1.64
FOXN1O15353 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
FOXN1O15353 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC4.79□□□□□ -1.64
FOXN1O15353 RN7SKP31-201ENST00000516354 278 ntBASIC4.79□□□□□ -1.64
FOXN1O15353 GNRHR2P1-201ENST00000555315 631 ntBASIC4.79□□□□□ -1.64
FOXN1O15353 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC4.79□□□□□ -1.64
FOXN1O15353 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC4.79□□□□□ -1.64
FOXN1O15353 AC008752.3-201ENST00000588113 712 ntBASIC4.79□□□□□ -1.64
FOXN1O15353 AC027807.2-201ENST00000616099 408 ntBASIC4.79□□□□□ -1.64
FOXN1O15353 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC4.79□□□□□ -1.64
FOXN1O15353 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
FOXN1O15353 VPS8-228ENST00000628962 207 ntTSL 5 BASIC4.79□□□□□ -1.64
FOXN1O15353 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
FOXN1O15353 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
FOXN1O15353 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.79□□□□□ -1.64
FOXN1O15353 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
FOXN1O15353 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
FOXN1O15353 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
FOXN1O15353 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC4.79□□□□□ -1.64
FOXN1O15353 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
FOXN1O15353 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.79□□□□□ -1.64
FOXN1O15353 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
FOXN1O15353 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
FOXN1O15353 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
FOXN1O15353 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.78□□□□□ -1.64
FOXN1O15353 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
FOXN1O15353 RNA5SP88-201ENST00000365560 109 ntBASIC4.78□□□□□ -1.64
FOXN1O15353 Y_RNA.402-201ENST00000383972 102 ntBASIC4.78□□□□□ -1.64
FOXN1O15353 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
FOXN1O15353 RNU6-780P-201ENST00000391030 104 ntBASIC4.78□□□□□ -1.64
FOXN1O15353 RPL31P1-201ENST00000398116 372 ntBASIC4.78□□□□□ -1.64
FOXN1O15353 CALM2P3-201ENST00000400429 449 ntBASIC4.78□□□□□ -1.64
FOXN1O15353 RNU2-42P-201ENST00000410697 113 ntBASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 111.4 ms