Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC2.62□□□□□ -1.99
UPK1AO00322 AL645568.2-201ENST00000432815 1337 ntBASIC2.62□□□□□ -1.99
UPK1AO00322 AL161431.1-201ENST00000618966 4205 ntBASIC2.62□□□□□ -1.99
UPK1AO00322 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.62□□□□□ -1.99
UPK1AO00322 MTND5P31-201ENST00000419366 1374 ntBASIC2.61□□□□□ -1.99
UPK1AO00322 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
UPK1AO00322 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.61□□□□□ -1.99
UPK1AO00322 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC2.61□□□□□ -1.99
UPK1AO00322 MIR16-2-201ENST00000362117 81 ntBASIC2.61□□□□□ -1.99
UPK1AO00322 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
UPK1AO00322 RNU6-761P-201ENST00000384148 107 ntBASIC2.61□□□□□ -1.99
UPK1AO00322 MIR592-201ENST00000384959 97 ntBASIC2.61□□□□□ -1.99
UPK1AO00322 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC2.61□□□□□ -1.99
UPK1AO00322 AL513175.2-201ENST00000422071 443 ntBASIC2.61□□□□□ -1.99
UPK1AO00322 AL009174.1-201ENST00000426577 416 ntBASIC2.61□□□□□ -1.99
UPK1AO00322 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC2.61□□□□□ -1.99
UPK1AO00322 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC2.61□□□□□ -1.99
UPK1AO00322 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.61□□□□□ -1.99
UPK1AO00322 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC2.61□□□□□ -1.99
UPK1AO00322 NANOGNBP1-201ENST00000448444 480 ntBASIC2.61□□□□□ -1.99
UPK1AO00322 AL034418.1-201ENST00000448675 860 ntBASIC2.61□□□□□ -1.99
UPK1AO00322 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC2.61□□□□□ -1.99
UPK1AO00322 OR6K1P-201ENST00000456766 971 ntBASIC2.61□□□□□ -1.99
UPK1AO00322 snoU13.4-201ENST00000458916 104 ntBASIC2.61□□□□□ -1.99
UPK1AO00322 OR52A4P-202ENST00000481634 799 ntBASIC2.61□□□□□ -1.99
UPK1AO00322 RPL21P47-201ENST00000483696 477 ntBASIC2.61□□□□□ -1.99
UPK1AO00322 AC011825.1-201ENST00000484967 388 ntBASIC2.61□□□□□ -1.99
UPK1AO00322 ENSA-210ENST00000503241 574 ntTSL 3 BASIC2.61□□□□□ -1.99
UPK1AO00322 AC111000.2-201ENST00000507775 550 ntBASIC2.61□□□□□ -1.99
UPK1AO00322 AC091826.1-201ENST00000514065 313 ntBASIC2.61□□□□□ -1.99
UPK1AO00322 RNU1-61P-201ENST00000516107 151 ntBASIC2.61□□□□□ -1.99
UPK1AO00322 AC104986.1-201ENST00000517978 436 ntBASIC2.61□□□□□ -1.99
UPK1AO00322 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC2.61□□□□□ -1.99
UPK1AO00322 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.61□□□□□ -1.99
UPK1AO00322 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC2.61□□□□□ -1.99
UPK1AO00322 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC2.61□□□□□ -1.99
UPK1AO00322 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC2.61□□□□□ -1.99
UPK1AO00322 BPTFP1-201ENST00000579209 492 ntBASIC2.61□□□□□ -1.99
UPK1AO00322 AL359198.2-201ENST00000611836 194 ntBASIC2.61□□□□□ -1.99
UPK1AO00322 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC2.61□□□□□ -1.99
UPK1AO00322 AC231759.1-201ENST00000616455 597 ntBASIC2.61□□□□□ -1.99
UPK1AO00322 AC006111.3-201ENST00000622137 383 ntBASIC2.61□□□□□ -1.99
UPK1AO00322 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.61□□□□□ -1.99
UPK1AO00322 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
UPK1AO00322 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC2.6□□□□□ -1.99
UPK1AO00322 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC2.6□□□□□ -1.99
UPK1AO00322 AL589826.1-201ENST00000340697 249 ntBASIC2.6□□□□□ -1.99
UPK1AO00322 MIR26A1-201ENST00000362205 77 ntBASIC2.6□□□□□ -1.99
UPK1AO00322 RNA5SP258-201ENST00000362750 119 ntBASIC2.6□□□□□ -1.99
UPK1AO00322 RNU6-1249P-201ENST00000363237 111 ntBASIC2.6□□□□□ -1.99
UPK1AO00322 SNORD21-201ENST00000383953 95 ntBASIC2.6□□□□□ -1.99
UPK1AO00322 SNORA18.3-201ENST00000384122 132 ntBASIC2.6□□□□□ -1.99
UPK1AO00322 MIR649-201ENST00000384843 97 ntBASIC2.6□□□□□ -1.99
UPK1AO00322 MIR491-201ENST00000384877 84 ntBASIC2.6□□□□□ -1.99
UPK1AO00322 RNU4-27P-201ENST00000410889 139 ntBASIC2.6□□□□□ -1.99
UPK1AO00322 TRIM60P5Y-201ENST00000413946 574 ntBASIC2.6□□□□□ -1.99
UPK1AO00322 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC2.6□□□□□ -1.99
UPK1AO00322 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.6□□□□□ -1.99
UPK1AO00322 AC002542.1-201ENST00000440683 193 ntBASIC2.6□□□□□ -1.99
UPK1AO00322 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC2.6□□□□□ -1.99
UPK1AO00322 AC004022.1-201ENST00000447766 1066 ntBASIC2.6□□□□□ -1.99
UPK1AO00322 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC2.6□□□□□ -1.99
UPK1AO00322 AC090525.1-201ENST00000479116 478 ntBASIC2.6□□□□□ -1.99
UPK1AO00322 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC2.6□□□□□ -1.99
UPK1AO00322 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
UPK1AO00322 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
UPK1AO00322 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
UPK1AO00322 AC117522.3-201ENST00000507974 584 ntBASIC2.6□□□□□ -1.99
UPK1AO00322 HIGD1AP13-201ENST00000509878 289 ntBASIC2.6□□□□□ -1.99
UPK1AO00322 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.6□□□□□ -1.99
UPK1AO00322 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
UPK1AO00322 RNU6-1102P-201ENST00000516149 96 ntBASIC2.6□□□□□ -1.99
UPK1AO00322 AC090136.1-201ENST00000520009 240 ntBASIC2.6□□□□□ -1.99
UPK1AO00322 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC2.6□□□□□ -1.99
UPK1AO00322 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC2.6□□□□□ -1.99
UPK1AO00322 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC2.6□□□□□ -1.99
UPK1AO00322 AC004486.1-201ENST00000546846 233 ntBASIC2.6□□□□□ -1.99
UPK1AO00322 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC2.6□□□□□ -1.99
UPK1AO00322 LSM6P2-201ENST00000552208 177 ntBASIC2.6□□□□□ -1.99
UPK1AO00322 AC011611.5-201ENST00000552477 578 ntBASIC2.6□□□□□ -1.99
UPK1AO00322 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC2.6□□□□□ -1.99
UPK1AO00322 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC2.6□□□□□ -1.99
UPK1AO00322 AP001029.3-201ENST00000588063 596 ntBASIC2.6□□□□□ -1.99
UPK1AO00322 ZNF861P-201ENST00000588126 639 ntBASIC2.6□□□□□ -1.99
UPK1AO00322 AP004247.3-201ENST00000608682 624 ntBASIC2.6□□□□□ -1.99
UPK1AO00322 AC097372.4-201ENST00000625025 466 ntBASIC2.6□□□□□ -1.99
UPK1AO00322 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.6□□□□□ -1.99
UPK1AO00322 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
UPK1AO00322 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
UPK1AO00322 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.6□□□□□ -1.99
UPK1AO00322 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
UPK1AO00322 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.59□□□□□ -1.99
UPK1AO00322 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
UPK1AO00322 AL136164.4-201ENST00000625013 2135 ntBASIC2.59□□□□□ -1.99
UPK1AO00322 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC2.59□□□□□ -1.99
UPK1AO00322 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
UPK1AO00322 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
UPK1AO00322 SNORA9-201ENST00000384215 133 ntBASIC2.59□□□□□ -1.99
UPK1AO00322 RNU6-921P-201ENST00000384361 107 ntBASIC2.59□□□□□ -1.99
UPK1AO00322 AL445183.3-201ENST00000414168 502 ntBASIC2.59□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms