Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC5.95□□□□□ -1.46
TMEM88BA6NKF7 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
TMEM88BA6NKF7 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
TMEM88BA6NKF7 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
TMEM88BA6NKF7 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
TMEM88BA6NKF7 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.94□□□□□ -1.46
TMEM88BA6NKF7 AC011504.1-201ENST00000623331 4103 ntBASIC5.94□□□□□ -1.46
TMEM88BA6NKF7 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
TMEM88BA6NKF7 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
TMEM88BA6NKF7 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
TMEM88BA6NKF7 SNORD113-7-201ENST00000363762 77 ntBASIC5.94□□□□□ -1.46
TMEM88BA6NKF7 RNU6-522P-201ENST00000364497 107 ntBASIC5.94□□□□□ -1.46
TMEM88BA6NKF7 PARD3-204ENST00000374768 799 ntTSL 3 BASIC5.94□□□□□ -1.46
TMEM88BA6NKF7 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
TMEM88BA6NKF7 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
TMEM88BA6NKF7 AL359634.1-202ENST00000404721 284 ntBASIC5.94□□□□□ -1.46
TMEM88BA6NKF7 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC5.94□□□□□ -1.46
TMEM88BA6NKF7 AC114491.1-201ENST00000416095 246 ntBASIC5.94□□□□□ -1.46
TMEM88BA6NKF7 AC099677.1-201ENST00000420575 175 ntBASIC5.94□□□□□ -1.46
TMEM88BA6NKF7 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC5.94□□□□□ -1.46
TMEM88BA6NKF7 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
TMEM88BA6NKF7 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC5.94□□□□□ -1.46
TMEM88BA6NKF7 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC5.94□□□□□ -1.46
TMEM88BA6NKF7 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC5.94□□□□□ -1.46
TMEM88BA6NKF7 PTMAP3-201ENST00000447474 330 ntBASIC5.94□□□□□ -1.46
TMEM88BA6NKF7 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC5.94□□□□□ -1.46
TMEM88BA6NKF7 AC011276.1-201ENST00000469688 323 ntBASIC5.94□□□□□ -1.46
TMEM88BA6NKF7 RPS17P5-201ENST00000498293 408 ntBASIC5.94□□□□□ -1.46
TMEM88BA6NKF7 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC5.94□□□□□ -1.46
TMEM88BA6NKF7 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC5.94□□□□□ -1.46
TMEM88BA6NKF7 RNU6-1170P-201ENST00000515974 106 ntBASIC5.94□□□□□ -1.46
TMEM88BA6NKF7 RNU6-390P-201ENST00000516259 103 ntBASIC5.94□□□□□ -1.46
TMEM88BA6NKF7 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC5.94□□□□□ -1.46
TMEM88BA6NKF7 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC5.94□□□□□ -1.46
TMEM88BA6NKF7 HNRNPCP4-201ENST00000571636 900 ntBASIC5.94□□□□□ -1.46
TMEM88BA6NKF7 AC024619.4-201ENST00000580924 316 ntBASIC5.94□□□□□ -1.46
TMEM88BA6NKF7 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC5.94□□□□□ -1.46
TMEM88BA6NKF7 AP001330.4-201ENST00000604350 154 ntBASIC5.94□□□□□ -1.46
TMEM88BA6NKF7 AL138960.1-201ENST00000613838 513 ntBASIC5.94□□□□□ -1.46
TMEM88BA6NKF7 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC5.94□□□□□ -1.46
TMEM88BA6NKF7 AL589994.2-201ENST00000621124 579 ntBASIC5.94□□□□□ -1.46
TMEM88BA6NKF7 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC5.94□□□□□ -1.46
TMEM88BA6NKF7 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC5.94□□□□□ -1.46
TMEM88BA6NKF7 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
TMEM88BA6NKF7 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.94□□□□□ -1.46
TMEM88BA6NKF7 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
TMEM88BA6NKF7 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC5.94□□□□□ -1.46
TMEM88BA6NKF7 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
TMEM88BA6NKF7 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
TMEM88BA6NKF7 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
TMEM88BA6NKF7 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
TMEM88BA6NKF7 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
TMEM88BA6NKF7 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
TMEM88BA6NKF7 AC121333.1-201ENST00000567488 2709 ntBASIC5.93□□□□□ -1.46
TMEM88BA6NKF7 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.93□□□□□ -1.46
TMEM88BA6NKF7 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
TMEM88BA6NKF7 RNU6-1155P-201ENST00000363554 107 ntBASIC5.93□□□□□ -1.46
TMEM88BA6NKF7 U3.12-201ENST00000364498 214 ntBASIC5.93□□□□□ -1.46
TMEM88BA6NKF7 RNA5SP223-201ENST00000365174 120 ntBASIC5.93□□□□□ -1.46
TMEM88BA6NKF7 SOD2P1-201ENST00000396543 562 ntBASIC5.93□□□□□ -1.46
TMEM88BA6NKF7 SNORA11.2-201ENST00000408318 127 ntBASIC5.93□□□□□ -1.46
TMEM88BA6NKF7 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC5.93□□□□□ -1.46
TMEM88BA6NKF7 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC5.93□□□□□ -1.46
TMEM88BA6NKF7 AC073410.1-201ENST00000435125 589 ntBASIC5.93□□□□□ -1.46
TMEM88BA6NKF7 AF015262.1-201ENST00000455028 698 ntTSL 3 BASIC5.93□□□□□ -1.46
TMEM88BA6NKF7 Y_RNA.635-201ENST00000459041 101 ntBASIC5.93□□□□□ -1.46
TMEM88BA6NKF7 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC5.93□□□□□ -1.46
TMEM88BA6NKF7 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC5.93□□□□□ -1.46
TMEM88BA6NKF7 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
TMEM88BA6NKF7 CYCSP29-201ENST00000533731 318 ntBASIC5.93□□□□□ -1.46
TMEM88BA6NKF7 AC027667.1-201ENST00000545814 304 ntBASIC5.93□□□□□ -1.46
TMEM88BA6NKF7 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
TMEM88BA6NKF7 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC5.93□□□□□ -1.46
TMEM88BA6NKF7 AC174048.1-201ENST00000603389 144 ntBASIC5.93□□□□□ -1.46
TMEM88BA6NKF7 AL138889.2-201ENST00000603883 242 ntBASIC5.93□□□□□ -1.46
TMEM88BA6NKF7 AC023043.4-201ENST00000612081 449 ntBASIC5.93□□□□□ -1.46
TMEM88BA6NKF7 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC5.93□□□□□ -1.46
TMEM88BA6NKF7 TEX41-265ENST00000627785 704 ntTSL 5 BASIC5.93□□□□□ -1.46
TMEM88BA6NKF7 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
TMEM88BA6NKF7 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
TMEM88BA6NKF7 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.93□□□□□ -1.46
TMEM88BA6NKF7 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
TMEM88BA6NKF7 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
TMEM88BA6NKF7 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
TMEM88BA6NKF7 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC5.92□□□□□ -1.46
TMEM88BA6NKF7 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
TMEM88BA6NKF7 AL442639.1-201ENST00000625030 1899 ntBASIC5.92□□□□□ -1.46
TMEM88BA6NKF7 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.92□□□□□ -1.46
TMEM88BA6NKF7 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
TMEM88BA6NKF7 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
TMEM88BA6NKF7 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC5.92□□□□□ -1.46
TMEM88BA6NKF7 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
TMEM88BA6NKF7 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.92□□□□□ -1.46
TMEM88BA6NKF7 SNORA70.4-201ENST00000365509 134 ntBASIC5.92□□□□□ -1.46
TMEM88BA6NKF7 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
TMEM88BA6NKF7 Y_RNA.419-201ENST00000384041 102 ntBASIC5.92□□□□□ -1.46
TMEM88BA6NKF7 RNU6-1297P-201ENST00000384415 104 ntBASIC5.92□□□□□ -1.46
TMEM88BA6NKF7 SNORA11.1-201ENST00000408133 129 ntBASIC5.92□□□□□ -1.46
TMEM88BA6NKF7 RNU2-43P-201ENST00000410306 190 ntBASIC5.92□□□□□ -1.46
TMEM88BA6NKF7 EIF4A1P3-201ENST00000411521 244 ntBASIC5.92□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 134.4 ms