Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC5.81□□□□□ -1.48
PCDHB11Q9Y5F2 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC5.81□□□□□ -1.48
PCDHB11Q9Y5F2 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC5.81□□□□□ -1.48
PCDHB11Q9Y5F2 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
PCDHB11Q9Y5F2 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
PCDHB11Q9Y5F2 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC5.81□□□□□ -1.48
PCDHB11Q9Y5F2 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
PCDHB11Q9Y5F2 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
PCDHB11Q9Y5F2 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
PCDHB11Q9Y5F2 AC093849.1-201ENST00000563631 2209 ntBASIC5.8□□□□□ -1.48
PCDHB11Q9Y5F2 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
PCDHB11Q9Y5F2 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
PCDHB11Q9Y5F2 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
PCDHB11Q9Y5F2 THAP12P9-201ENST00000503971 2360 ntBASIC5.8□□□□□ -1.48
PCDHB11Q9Y5F2 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
PCDHB11Q9Y5F2 AC012254.3-201ENST00000591183 2117 ntBASIC5.8□□□□□ -1.48
PCDHB11Q9Y5F2 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.8□□□□□ -1.48
PCDHB11Q9Y5F2 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC5.8□□□□□ -1.48
PCDHB11Q9Y5F2 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
PCDHB11Q9Y5F2 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
PCDHB11Q9Y5F2 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC5.8□□□□□ -1.48
PCDHB11Q9Y5F2 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC5.8□□□□□ -1.48
PCDHB11Q9Y5F2 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC5.8□□□□□ -1.48
PCDHB11Q9Y5F2 RNU1-74P-201ENST00000384108 171 ntBASIC5.8□□□□□ -1.48
PCDHB11Q9Y5F2 Y_RNA.478-201ENST00000384358 107 ntBASIC5.8□□□□□ -1.48
PCDHB11Q9Y5F2 AC110754.1-201ENST00000399740 601 ntBASIC5.8□□□□□ -1.48
PCDHB11Q9Y5F2 RNU6-174P-201ENST00000410406 106 ntBASIC5.8□□□□□ -1.48
PCDHB11Q9Y5F2 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC5.8□□□□□ -1.48
PCDHB11Q9Y5F2 AC139712.2-201ENST00000424302 339 ntBASIC5.8□□□□□ -1.48
PCDHB11Q9Y5F2 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC5.8□□□□□ -1.48
PCDHB11Q9Y5F2 RPS3AP12-201ENST00000443616 753 ntBASIC5.8□□□□□ -1.48
PCDHB11Q9Y5F2 GAS5-218ENST00000448718 565 ntTSL 2 BASIC5.8□□□□□ -1.48
PCDHB11Q9Y5F2 PCMTD1P1-201ENST00000455560 355 ntBASIC5.8□□□□□ -1.48
PCDHB11Q9Y5F2 AP000942.1-201ENST00000463969 747 ntBASIC5.8□□□□□ -1.48
PCDHB11Q9Y5F2 VN1R105P-201ENST00000486595 910 ntBASIC5.8□□□□□ -1.48
PCDHB11Q9Y5F2 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
PCDHB11Q9Y5F2 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
PCDHB11Q9Y5F2 AC009643.1-201ENST00000532030 391 ntBASIC5.8□□□□□ -1.48
PCDHB11Q9Y5F2 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC5.8□□□□□ -1.48
PCDHB11Q9Y5F2 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC5.8□□□□□ -1.48
PCDHB11Q9Y5F2 AC022404.1-201ENST00000555320 273 ntBASIC5.8□□□□□ -1.48
PCDHB11Q9Y5F2 SNORD95-201ENST00000579879 68 ntBASIC5.8□□□□□ -1.48
PCDHB11Q9Y5F2 AL136228.1-201ENST00000622221 319 ntBASIC5.8□□□□□ -1.48
PCDHB11Q9Y5F2 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
PCDHB11Q9Y5F2 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC5.8□□□□□ -1.48
PCDHB11Q9Y5F2 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.8□□□□□ -1.48
PCDHB11Q9Y5F2 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
PCDHB11Q9Y5F2 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.8□□□□□ -1.48
PCDHB11Q9Y5F2 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
PCDHB11Q9Y5F2 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
PCDHB11Q9Y5F2 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
PCDHB11Q9Y5F2 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
PCDHB11Q9Y5F2 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC5.8□□□□□ -1.48
PCDHB11Q9Y5F2 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
PCDHB11Q9Y5F2 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
PCDHB11Q9Y5F2 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
PCDHB11Q9Y5F2 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
PCDHB11Q9Y5F2 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
PCDHB11Q9Y5F2 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
PCDHB11Q9Y5F2 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
PCDHB11Q9Y5F2 AC123769.1-201ENST00000530992 3192 ntBASIC5.79□□□□□ -1.48
PCDHB11Q9Y5F2 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC5.79□□□□□ -1.48
PCDHB11Q9Y5F2 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PCDHB11Q9Y5F2 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
PCDHB11Q9Y5F2 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PCDHB11Q9Y5F2 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
PCDHB11Q9Y5F2 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.79□□□□□ -1.48
PCDHB11Q9Y5F2 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
PCDHB11Q9Y5F2 Y_RNA.26-201ENST00000362539 101 ntBASIC5.79□□□□□ -1.48
PCDHB11Q9Y5F2 RNU6-989P-201ENST00000362756 107 ntBASIC5.79□□□□□ -1.48
PCDHB11Q9Y5F2 RNU6-200P-201ENST00000364743 107 ntBASIC5.79□□□□□ -1.48
PCDHB11Q9Y5F2 RNU6-1303P-201ENST00000364841 107 ntBASIC5.79□□□□□ -1.48
PCDHB11Q9Y5F2 AC019155.1-201ENST00000382242 574 ntBASIC5.79□□□□□ -1.48
PCDHB11Q9Y5F2 Y_RNA.526-201ENST00000384572 110 ntBASIC5.79□□□□□ -1.48
PCDHB11Q9Y5F2 RNU6-821P-201ENST00000390995 107 ntBASIC5.79□□□□□ -1.48
PCDHB11Q9Y5F2 RNU6-1093P-201ENST00000391194 107 ntBASIC5.79□□□□□ -1.48
PCDHB11Q9Y5F2 AL590704.1-201ENST00000402856 794 ntBASIC5.79□□□□□ -1.48
PCDHB11Q9Y5F2 OR2AT2P-201ENST00000413438 905 ntBASIC5.79□□□□□ -1.48
PCDHB11Q9Y5F2 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC5.79□□□□□ -1.48
PCDHB11Q9Y5F2 AL353997.1-201ENST00000432936 108 ntBASIC5.79□□□□□ -1.48
PCDHB11Q9Y5F2 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC5.79□□□□□ -1.48
PCDHB11Q9Y5F2 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC5.79□□□□□ -1.48
PCDHB11Q9Y5F2 ACA64.4-201ENST00000459070 127 ntBASIC5.79□□□□□ -1.48
PCDHB11Q9Y5F2 RPL37P6-201ENST00000460682 294 ntBASIC5.79□□□□□ -1.48
PCDHB11Q9Y5F2 AC091180.1-201ENST00000462104 372 ntBASIC5.79□□□□□ -1.48
PCDHB11Q9Y5F2 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC5.79□□□□□ -1.48
PCDHB11Q9Y5F2 AC018437.1-201ENST00000492214 406 ntBASIC5.79□□□□□ -1.48
PCDHB11Q9Y5F2 RNU6-138P-201ENST00000515952 107 ntBASIC5.79□□□□□ -1.48
PCDHB11Q9Y5F2 RNU6-390P-201ENST00000516259 103 ntBASIC5.79□□□□□ -1.48
PCDHB11Q9Y5F2 RNU7-4P-201ENST00000516961 62 ntBASIC5.79□□□□□ -1.48
PCDHB11Q9Y5F2 AC069113.1-201ENST00000517763 267 ntBASIC5.79□□□□□ -1.48
PCDHB11Q9Y5F2 MAL2-201ENST00000522112 573 ntTSL 4 BASIC5.79□□□□□ -1.48
PCDHB11Q9Y5F2 AP000648.1-201ENST00000529682 397 ntBASIC5.79□□□□□ -1.48
PCDHB11Q9Y5F2 SARNP-203ENST00000552080 726 ntTSL 2 BASIC5.79□□□□□ -1.48
PCDHB11Q9Y5F2 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC5.79□□□□□ -1.48
PCDHB11Q9Y5F2 MIR4776-2-201ENST00000580204 80 ntBASIC5.79□□□□□ -1.48
PCDHB11Q9Y5F2 AL161616.1-201ENST00000611867 286 ntBASIC5.79□□□□□ -1.48
PCDHB11Q9Y5F2 MVP-219ENST00000629059 120 ntTSL 5 BASIC5.79□□□□□ -1.48
PCDHB11Q9Y5F2 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC5.79□□□□□ -1.48
PCDHB11Q9Y5F2 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 94.8 ms