Protein–RNA interactions for Protein: Q9UMD9

COL17A1, Collagen alpha-1(XVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1Q9UMD9 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
COL17A1Q9UMD9 CR383658.2-201ENST00000547576 1525 ntBASIC6.29□□□□□ -1.4
COL17A1Q9UMD9 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
COL17A1Q9UMD9 Z82217.1-201ENST00000625157 8149 ntBASIC6.29□□□□□ -1.4
COL17A1Q9UMD9 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
COL17A1Q9UMD9 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC6.28□□□□□ -1.4
COL17A1Q9UMD9 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC6.28□□□□□ -1.4
COL17A1Q9UMD9 Y_RNA.128-201ENST00000363391 112 ntBASIC6.28□□□□□ -1.4
COL17A1Q9UMD9 RNU6-501P-201ENST00000364072 100 ntBASIC6.28□□□□□ -1.4
COL17A1Q9UMD9 SNORA4.3-201ENST00000365564 137 ntBASIC6.28□□□□□ -1.4
COL17A1Q9UMD9 RNU6-474P-201ENST00000384243 107 ntBASIC6.28□□□□□ -1.4
COL17A1Q9UMD9 SNORD3H-201ENST00000384486 214 ntBASIC6.28□□□□□ -1.4
COL17A1Q9UMD9 MIR16-1-201ENST00000385271 89 ntBASIC6.28□□□□□ -1.4
COL17A1Q9UMD9 MTCO3P40-201ENST00000392516 676 ntBASIC6.28□□□□□ -1.4
COL17A1Q9UMD9 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
COL17A1Q9UMD9 AL359643.1-201ENST00000404109 423 ntBASIC6.28□□□□□ -1.4
COL17A1Q9UMD9 AC073136.2-201ENST00000417282 849 ntBASIC6.28□□□□□ -1.4
COL17A1Q9UMD9 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC6.28□□□□□ -1.4
COL17A1Q9UMD9 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC6.28□□□□□ -1.4
COL17A1Q9UMD9 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC6.28□□□□□ -1.4
COL17A1Q9UMD9 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC6.28□□□□□ -1.4
COL17A1Q9UMD9 YWHAQP9-201ENST00000445891 512 ntBASIC6.28□□□□□ -1.4
COL17A1Q9UMD9 BX248409.1-201ENST00000455497 255 ntBASIC6.28□□□□□ -1.4
COL17A1Q9UMD9 MTND5P22-201ENST00000458380 195 ntBASIC6.28□□□□□ -1.4
COL17A1Q9UMD9 AL136126.1-201ENST00000473603 402 ntBASIC6.28□□□□□ -1.4
COL17A1Q9UMD9 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC6.28□□□□□ -1.4
COL17A1Q9UMD9 UBE2CP3-201ENST00000502715 450 ntBASIC6.28□□□□□ -1.4
COL17A1Q9UMD9 AC104619.4-201ENST00000510773 249 ntBASIC6.28□□□□□ -1.4
COL17A1Q9UMD9 MTCO2P24-201ENST00000515611 426 ntBASIC6.28□□□□□ -1.4
COL17A1Q9UMD9 RN7SKP116-201ENST00000516902 319 ntBASIC6.28□□□□□ -1.4
COL17A1Q9UMD9 CA1-215ENST00000522389 551 ntTSL 3 BASIC6.28□□□□□ -1.4
COL17A1Q9UMD9 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC6.28□□□□□ -1.4
COL17A1Q9UMD9 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC6.28□□□□□ -1.4
COL17A1Q9UMD9 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC6.28□□□□□ -1.4
COL17A1Q9UMD9 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC6.28□□□□□ -1.4
COL17A1Q9UMD9 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC6.28□□□□□ -1.4
COL17A1Q9UMD9 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC6.28□□□□□ -1.4
COL17A1Q9UMD9 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
COL17A1Q9UMD9 NXPH1-205ENST00000602349 1953 ntBASIC6.28□□□□□ -1.4
COL17A1Q9UMD9 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC6.28□□□□□ -1.4
COL17A1Q9UMD9 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC6.28□□□□□ -1.4
COL17A1Q9UMD9 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC6.28□□□□□ -1.4
COL17A1Q9UMD9 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
COL17A1Q9UMD9 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
COL17A1Q9UMD9 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC6.28□□□□□ -1.4
COL17A1Q9UMD9 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
COL17A1Q9UMD9 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
COL17A1Q9UMD9 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
COL17A1Q9UMD9 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC6.28□□□□□ -1.4
COL17A1Q9UMD9 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC6.28□□□□□ -1.4
COL17A1Q9UMD9 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC6.28□□□□□ -1.4
COL17A1Q9UMD9 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
COL17A1Q9UMD9 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
COL17A1Q9UMD9 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
COL17A1Q9UMD9 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
COL17A1Q9UMD9 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC6.28□□□□□ -1.4
COL17A1Q9UMD9 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC6.28□□□□□ -1.4
COL17A1Q9UMD9 CYCSP45-201ENST00000402289 315 ntBASIC6.28□□□□□ -1.4
COL17A1Q9UMD9 RNU6-847P-201ENST00000411115 108 ntBASIC6.28□□□□□ -1.4
COL17A1Q9UMD9 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC6.28□□□□□ -1.4
COL17A1Q9UMD9 RPS7P15-201ENST00000415804 584 ntBASIC6.28□□□□□ -1.4
COL17A1Q9UMD9 PDCL2P1-201ENST00000419302 352 ntBASIC6.28□□□□□ -1.4
COL17A1Q9UMD9 DPY19L1P2-201ENST00000426647 915 ntBASIC6.28□□□□□ -1.4
COL17A1Q9UMD9 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC6.28□□□□□ -1.4
COL17A1Q9UMD9 AL731563.1-201ENST00000442202 214 ntBASIC6.28□□□□□ -1.4
COL17A1Q9UMD9 AL031584.1-201ENST00000447169 754 ntBASIC6.28□□□□□ -1.4
COL17A1Q9UMD9 AC006480.1-201ENST00000449887 378 ntBASIC6.28□□□□□ -1.4
COL17A1Q9UMD9 RPS11P1-201ENST00000451072 473 ntBASIC6.28□□□□□ -1.4
COL17A1Q9UMD9 AC010655.3-201ENST00000478818 450 ntBASIC6.28□□□□□ -1.4
COL17A1Q9UMD9 AC106707.2-201ENST00000484182 374 ntBASIC6.28□□□□□ -1.4
COL17A1Q9UMD9 AP002812.4-201ENST00000532139 286 ntBASIC6.28□□□□□ -1.4
COL17A1Q9UMD9 POLR2KP1-201ENST00000553226 168 ntBASIC6.28□□□□□ -1.4
COL17A1Q9UMD9 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC6.28□□□□□ -1.4
COL17A1Q9UMD9 AC107954.1-201ENST00000565906 727 ntBASIC6.28□□□□□ -1.4
COL17A1Q9UMD9 AC093249.1-201ENST00000567049 203 ntBASIC6.28□□□□□ -1.4
COL17A1Q9UMD9 AL160290.3-201ENST00000604869 165 ntBASIC6.28□□□□□ -1.4
COL17A1Q9UMD9 AC113194.1-201ENST00000606037 500 ntBASIC6.28□□□□□ -1.4
COL17A1Q9UMD9 AC079228.1-201ENST00000624774 1049 ntBASIC6.28□□□□□ -1.4
COL17A1Q9UMD9 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC6.27□□□□□ -1.41
COL17A1Q9UMD9 VPS35P1-201ENST00000563400 1518 ntBASIC6.27□□□□□ -1.41
COL17A1Q9UMD9 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
COL17A1Q9UMD9 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
COL17A1Q9UMD9 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC6.27□□□□□ -1.41
COL17A1Q9UMD9 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC6.27□□□□□ -1.41
COL17A1Q9UMD9 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
COL17A1Q9UMD9 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
COL17A1Q9UMD9 RNU6-845P-201ENST00000362578 103 ntBASIC6.27□□□□□ -1.41
COL17A1Q9UMD9 Y_RNA.86-201ENST00000363020 111 ntBASIC6.27□□□□□ -1.41
COL17A1Q9UMD9 Y_RNA.188-201ENST00000363952 111 ntBASIC6.27□□□□□ -1.41
COL17A1Q9UMD9 RNU4-7P-201ENST00000364758 141 ntBASIC6.27□□□□□ -1.41
COL17A1Q9UMD9 RN7SKP186-201ENST00000365371 303 ntBASIC6.27□□□□□ -1.41
COL17A1Q9UMD9 RPS24P12-201ENST00000402084 394 ntBASIC6.27□□□□□ -1.41
COL17A1Q9UMD9 RNU2-42P-201ENST00000410697 113 ntBASIC6.27□□□□□ -1.41
COL17A1Q9UMD9 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC6.27□□□□□ -1.41
COL17A1Q9UMD9 AL034379.1-201ENST00000423216 253 ntBASIC6.27□□□□□ -1.41
COL17A1Q9UMD9 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC6.27□□□□□ -1.41
COL17A1Q9UMD9 RPL21P110-201ENST00000433345 446 ntBASIC6.27□□□□□ -1.41
COL17A1Q9UMD9 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC6.27□□□□□ -1.41
COL17A1Q9UMD9 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC6.27□□□□□ -1.41
COL17A1Q9UMD9 NDUFA5P7-201ENST00000452914 242 ntBASIC6.27□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms