Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 SULT1C2P1-202ENST00000562418 459 ntBASIC3.38□□□□□ -1.87
NDE1Q9NXR1 AC012435.1-202ENST00000568772 240 ntBASIC3.38□□□□□ -1.87
NDE1Q9NXR1 AC002400.1-201ENST00000569310 726 ntBASIC3.38□□□□□ -1.87
NDE1Q9NXR1 MIR1254-2-201ENST00000579553 63 ntBASIC3.38□□□□□ -1.87
NDE1Q9NXR1 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC3.38□□□□□ -1.87
NDE1Q9NXR1 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.38□□□□□ -1.87
NDE1Q9NXR1 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.38□□□□□ -1.87
NDE1Q9NXR1 AC121247.2-201ENST00000604776 136 ntBASIC3.38□□□□□ -1.87
NDE1Q9NXR1 AC010738.1-201ENST00000604970 987 ntBASIC3.38□□□□□ -1.87
NDE1Q9NXR1 AC018714.1-201ENST00000605028 208 ntBASIC3.38□□□□□ -1.87
NDE1Q9NXR1 RNA5SP108-201ENST00000605921 117 ntBASIC3.38□□□□□ -1.87
NDE1Q9NXR1 AL445567.2-201ENST00000618935 498 ntBASIC3.38□□□□□ -1.87
NDE1Q9NXR1 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC3.38□□□□□ -1.87
NDE1Q9NXR1 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.38□□□□□ -1.87
NDE1Q9NXR1 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.38□□□□□ -1.87
NDE1Q9NXR1 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
NDE1Q9NXR1 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
NDE1Q9NXR1 RLIMP1-201ENST00000339626 1680 ntBASIC3.37□□□□□ -1.87
NDE1Q9NXR1 AL672296.1-201ENST00000427780 2158 ntBASIC3.37□□□□□ -1.87
NDE1Q9NXR1 RNU6-1243P-201ENST00000364028 107 ntBASIC3.37□□□□□ -1.87
NDE1Q9NXR1 RNU6-553P-201ENST00000364047 96 ntBASIC3.37□□□□□ -1.87
NDE1Q9NXR1 CUBN-201ENST00000377823 705 ntTSL 3 BASIC3.37□□□□□ -1.87
NDE1Q9NXR1 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC3.37□□□□□ -1.87
NDE1Q9NXR1 Y_RNA.560-201ENST00000384689 102 ntBASIC3.37□□□□□ -1.87
NDE1Q9NXR1 RNU6-253P-201ENST00000384730 105 ntBASIC3.37□□□□□ -1.87
NDE1Q9NXR1 MIR153-1-201ENST00000384914 90 ntBASIC3.37□□□□□ -1.87
NDE1Q9NXR1 MIR23A-201ENST00000385245 73 ntBASIC3.37□□□□□ -1.87
NDE1Q9NXR1 SOD2P1-201ENST00000396543 562 ntBASIC3.37□□□□□ -1.87
NDE1Q9NXR1 RN7SKP27-201ENST00000410684 333 ntBASIC3.37□□□□□ -1.87
NDE1Q9NXR1 USP9YP33-201ENST00000412220 421 ntBASIC3.37□□□□□ -1.87
NDE1Q9NXR1 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC3.37□□□□□ -1.87
NDE1Q9NXR1 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.37□□□□□ -1.87
NDE1Q9NXR1 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC3.37□□□□□ -1.87
NDE1Q9NXR1 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC3.37□□□□□ -1.87
NDE1Q9NXR1 MTND4P20-201ENST00000424125 869 ntBASIC3.37□□□□□ -1.87
NDE1Q9NXR1 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.37□□□□□ -1.87
NDE1Q9NXR1 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC3.37□□□□□ -1.87
NDE1Q9NXR1 AC096632.1-201ENST00000427395 310 ntBASIC3.37□□□□□ -1.87
NDE1Q9NXR1 USP9YP35-201ENST00000435696 412 ntBASIC3.37□□□□□ -1.87
NDE1Q9NXR1 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC3.37□□□□□ -1.87
NDE1Q9NXR1 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC3.37□□□□□ -1.87
NDE1Q9NXR1 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC3.37□□□□□ -1.87
NDE1Q9NXR1 TRGVB-201ENST00000453257 471 ntBASIC3.37□□□□□ -1.87
NDE1Q9NXR1 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC3.37□□□□□ -1.87
NDE1Q9NXR1 AC007967.1-201ENST00000455422 1159 ntBASIC3.37□□□□□ -1.87
NDE1Q9NXR1 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC3.37□□□□□ -1.87
NDE1Q9NXR1 RPS3AP43-201ENST00000479743 781 ntBASIC3.37□□□□□ -1.87
NDE1Q9NXR1 AHI1-208ENST00000488690 712 ntTSL 5 BASIC3.37□□□□□ -1.87
NDE1Q9NXR1 AC005726.1-201ENST00000494679 427 ntBASIC3.37□□□□□ -1.87
NDE1Q9NXR1 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC3.37□□□□□ -1.87
NDE1Q9NXR1 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC3.37□□□□□ -1.87
NDE1Q9NXR1 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
NDE1Q9NXR1 LTV1P1-201ENST00000510683 1237 ntBASIC3.37□□□□□ -1.87
NDE1Q9NXR1 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC3.37□□□□□ -1.87
NDE1Q9NXR1 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.37□□□□□ -1.87
NDE1Q9NXR1 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC3.37□□□□□ -1.87
NDE1Q9NXR1 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC3.37□□□□□ -1.87
NDE1Q9NXR1 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.37□□□□□ -1.87
NDE1Q9NXR1 RNU6-583P-201ENST00000516012 92 ntBASIC3.37□□□□□ -1.87
NDE1Q9NXR1 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC3.37□□□□□ -1.87
NDE1Q9NXR1 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.37□□□□□ -1.87
NDE1Q9NXR1 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
NDE1Q9NXR1 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC3.37□□□□□ -1.87
NDE1Q9NXR1 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC3.37□□□□□ -1.87
NDE1Q9NXR1 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.37□□□□□ -1.87
NDE1Q9NXR1 AC136624.4-201ENST00000573044 370 ntBASIC3.37□□□□□ -1.87
NDE1Q9NXR1 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC3.37□□□□□ -1.87
NDE1Q9NXR1 MIR4277-201ENST00000578298 84 ntBASIC3.37□□□□□ -1.87
NDE1Q9NXR1 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC3.37□□□□□ -1.87
NDE1Q9NXR1 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.37□□□□□ -1.87
NDE1Q9NXR1 AC110760.3-201ENST00000598794 467 ntBASIC3.37□□□□□ -1.87
NDE1Q9NXR1 AC069304.2-201ENST00000605154 435 ntBASIC3.37□□□□□ -1.87
NDE1Q9NXR1 AL392048.1-201ENST00000613946 534 ntBASIC3.37□□□□□ -1.87
NDE1Q9NXR1 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC3.37□□□□□ -1.87
NDE1Q9NXR1 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC3.37□□□□□ -1.87
NDE1Q9NXR1 AF246928.1-201ENST00000623768 87 ntBASIC3.37□□□□□ -1.87
NDE1Q9NXR1 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
NDE1Q9NXR1 AC007494.3-201ENST00000624660 743 ntBASIC3.37□□□□□ -1.87
NDE1Q9NXR1 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.37□□□□□ -1.87
NDE1Q9NXR1 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.37□□□□□ -1.87
NDE1Q9NXR1 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.37□□□□□ -1.87
NDE1Q9NXR1 ELL2P4-201ENST00000446870 1376 ntBASIC3.37□□□□□ -1.87
NDE1Q9NXR1 MTND4P34-201ENST00000572715 1371 ntBASIC3.37□□□□□ -1.87
NDE1Q9NXR1 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
NDE1Q9NXR1 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC3.36□□□□□ -1.87
NDE1Q9NXR1 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.36□□□□□ -1.87
NDE1Q9NXR1 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
NDE1Q9NXR1 RNA5SP189-201ENST00000364920 115 ntBASIC3.36□□□□□ -1.87
NDE1Q9NXR1 AL021407.1-201ENST00000404531 386 ntBASIC3.36□□□□□ -1.87
NDE1Q9NXR1 RPL21P65-201ENST00000406094 466 ntBASIC3.36□□□□□ -1.87
NDE1Q9NXR1 AC007899.1-201ENST00000412776 775 ntBASIC3.36□□□□□ -1.87
NDE1Q9NXR1 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC3.36□□□□□ -1.87
NDE1Q9NXR1 RPS3AP9-201ENST00000417027 792 ntBASIC3.36□□□□□ -1.87
NDE1Q9NXR1 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC3.36□□□□□ -1.87
NDE1Q9NXR1 DNAJA1P2-201ENST00000421360 1197 ntBASIC3.36□□□□□ -1.87
NDE1Q9NXR1 AL591419.1-201ENST00000427423 339 ntBASIC3.36□□□□□ -1.87
NDE1Q9NXR1 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC3.36□□□□□ -1.87
NDE1Q9NXR1 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC3.36□□□□□ -1.87
NDE1Q9NXR1 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC3.36□□□□□ -1.87
NDE1Q9NXR1 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms