Protein–RNA interactions for Protein: Q9NSD5

SLC6A13, Sodium- and chloride-dependent GABA transporter 2, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A13Q9NSD5 AC091965.4-201ENST00000607691 587 ntBASIC3.77□□□□□ -1.81
SLC6A13Q9NSD5 AC092354.2-201ENST00000607786 514 ntBASIC3.77□□□□□ -1.81
SLC6A13Q9NSD5 AL158063.1-201ENST00000615349 536 ntBASIC3.77□□□□□ -1.81
SLC6A13Q9NSD5 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
SLC6A13Q9NSD5 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.77□□□□□ -1.81
SLC6A13Q9NSD5 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
SLC6A13Q9NSD5 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
SLC6A13Q9NSD5 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
SLC6A13Q9NSD5 AL645937.1-201ENST00000641739 1652 ntBASIC3.77□□□□□ -1.81
SLC6A13Q9NSD5 FAM35DP-201ENST00000323387 2712 ntBASIC3.77□□□□□ -1.81
SLC6A13Q9NSD5 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
SLC6A13Q9NSD5 MTND4P4-201ENST00000439033 1366 ntBASIC3.76□□□□□ -1.81
SLC6A13Q9NSD5 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
SLC6A13Q9NSD5 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.76□□□□□ -1.81
SLC6A13Q9NSD5 CCT4P2-201ENST00000233836 1548 ntBASIC3.76□□□□□ -1.81
SLC6A13Q9NSD5 IPO8P1-201ENST00000455509 3109 ntBASIC3.76□□□□□ -1.81
SLC6A13Q9NSD5 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
SLC6A13Q9NSD5 AL121657.1-201ENST00000327215 531 ntBASIC3.76□□□□□ -1.81
SLC6A13Q9NSD5 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
SLC6A13Q9NSD5 RNU6-1155P-201ENST00000363554 107 ntBASIC3.76□□□□□ -1.81
SLC6A13Q9NSD5 RNA5SP399-201ENST00000364003 117 ntBASIC3.76□□□□□ -1.81
SLC6A13Q9NSD5 RNA5SP235-201ENST00000365411 114 ntBASIC3.76□□□□□ -1.81
SLC6A13Q9NSD5 Y_RNA.548-201ENST00000384656 105 ntBASIC3.76□□□□□ -1.81
SLC6A13Q9NSD5 AL138880.1-201ENST00000405824 642 ntBASIC3.76□□□□□ -1.81
SLC6A13Q9NSD5 RNU4-25P-201ENST00000410569 230 ntBASIC3.76□□□□□ -1.81
SLC6A13Q9NSD5 HSPE1P12-201ENST00000412576 301 ntBASIC3.76□□□□□ -1.81
SLC6A13Q9NSD5 RPL23AP26-201ENST00000412728 464 ntBASIC3.76□□□□□ -1.81
SLC6A13Q9NSD5 TOMM22P1-201ENST00000418578 312 ntBASIC3.76□□□□□ -1.81
SLC6A13Q9NSD5 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC3.76□□□□□ -1.81
SLC6A13Q9NSD5 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC3.76□□□□□ -1.81
SLC6A13Q9NSD5 COX6CP2-201ENST00000444980 225 ntBASIC3.76□□□□□ -1.81
SLC6A13Q9NSD5 GDI2P2-201ENST00000445131 608 ntBASIC3.76□□□□□ -1.81
SLC6A13Q9NSD5 NPM1P49-201ENST00000448027 714 ntBASIC3.76□□□□□ -1.81
SLC6A13Q9NSD5 RPS11P1-201ENST00000451072 473 ntBASIC3.76□□□□□ -1.81
SLC6A13Q9NSD5 GAS5-223ENST00000452197 483 ntTSL 3 BASIC3.76□□□□□ -1.81
SLC6A13Q9NSD5 AP000797.1-201ENST00000478870 387 ntBASIC3.76□□□□□ -1.81
SLC6A13Q9NSD5 AC091167.1-201ENST00000492017 396 ntBASIC3.76□□□□□ -1.81
SLC6A13Q9NSD5 RN7SL604P-201ENST00000492589 296 ntBASIC3.76□□□□□ -1.81
SLC6A13Q9NSD5 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC3.76□□□□□ -1.81
SLC6A13Q9NSD5 HMGB1P22-201ENST00000505315 124 ntBASIC3.76□□□□□ -1.81
SLC6A13Q9NSD5 AC023141.12-201ENST00000512399 199 ntBASIC3.76□□□□□ -1.81
SLC6A13Q9NSD5 MTND5P13-201ENST00000513046 1079 ntBASIC3.76□□□□□ -1.81
SLC6A13Q9NSD5 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC3.76□□□□□ -1.81
SLC6A13Q9NSD5 RNA5SP143-201ENST00000516936 115 ntBASIC3.76□□□□□ -1.81
SLC6A13Q9NSD5 IGKV2D-23-201ENST00000518179 286 ntBASIC3.76□□□□□ -1.81
SLC6A13Q9NSD5 AC025881.1-201ENST00000518851 512 ntBASIC3.76□□□□□ -1.81
SLC6A13Q9NSD5 AC060788.1-201ENST00000521318 469 ntBASIC3.76□□□□□ -1.81
SLC6A13Q9NSD5 MAL2-203ENST00000534619 578 ntTSL 4 BASIC3.76□□□□□ -1.81
SLC6A13Q9NSD5 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC3.76□□□□□ -1.81
SLC6A13Q9NSD5 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC3.76□□□□□ -1.81
SLC6A13Q9NSD5 AC107016.1-201ENST00000550463 337 ntBASIC3.76□□□□□ -1.81
SLC6A13Q9NSD5 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC3.76□□□□□ -1.81
SLC6A13Q9NSD5 AC012182.1-201ENST00000570133 895 ntBASIC3.76□□□□□ -1.81
SLC6A13Q9NSD5 ABBA01006766.1-201ENST00000584728 294 ntBASIC3.76□□□□□ -1.81
SLC6A13Q9NSD5 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC3.76□□□□□ -1.81
SLC6A13Q9NSD5 AC022916.3-201ENST00000592961 742 ntBASIC3.76□□□□□ -1.81
SLC6A13Q9NSD5 AC015726.1-201ENST00000602353 681 ntBASIC3.76□□□□□ -1.81
SLC6A13Q9NSD5 AC006254.3-201ENST00000603353 884 ntBASIC3.76□□□□□ -1.81
SLC6A13Q9NSD5 AL358072.1-201ENST00000604156 575 ntBASIC3.76□□□□□ -1.81
SLC6A13Q9NSD5 AC011451.2-201ENST00000604303 598 ntBASIC3.76□□□□□ -1.81
SLC6A13Q9NSD5 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC3.76□□□□□ -1.81
SLC6A13Q9NSD5 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC3.76□□□□□ -1.81
SLC6A13Q9NSD5 MIR486-1-201ENST00000612171 68 ntBASIC3.76□□□□□ -1.81
SLC6A13Q9NSD5 AC103858.2-201ENST00000621471 543 ntBASIC3.76□□□□□ -1.81
SLC6A13Q9NSD5 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
SLC6A13Q9NSD5 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
SLC6A13Q9NSD5 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC3.76□□□□□ -1.81
SLC6A13Q9NSD5 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
SLC6A13Q9NSD5 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
SLC6A13Q9NSD5 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.76□□□□□ -1.81
SLC6A13Q9NSD5 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.76□□□□□ -1.81
SLC6A13Q9NSD5 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
SLC6A13Q9NSD5 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
SLC6A13Q9NSD5 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
SLC6A13Q9NSD5 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
SLC6A13Q9NSD5 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC3.75□□□□□ -1.81
SLC6A13Q9NSD5 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
SLC6A13Q9NSD5 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
SLC6A13Q9NSD5 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.75□□□□□ -1.81
SLC6A13Q9NSD5 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.75□□□□□ -1.81
SLC6A13Q9NSD5 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
SLC6A13Q9NSD5 MIR383-201ENST00000362257 73 ntBASIC3.75□□□□□ -1.81
SLC6A13Q9NSD5 RNA5SP167-201ENST00000365461 116 ntBASIC3.75□□□□□ -1.81
SLC6A13Q9NSD5 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
SLC6A13Q9NSD5 U3.20-201ENST00000390909 217 ntBASIC3.75□□□□□ -1.81
SLC6A13Q9NSD5 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
SLC6A13Q9NSD5 RN7SKP33-201ENST00000410942 340 ntBASIC3.75□□□□□ -1.81
SLC6A13Q9NSD5 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.75□□□□□ -1.81
SLC6A13Q9NSD5 OR1AA1P-201ENST00000419597 916 ntBASIC3.75□□□□□ -1.81
SLC6A13Q9NSD5 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
SLC6A13Q9NSD5 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC3.75□□□□□ -1.81
SLC6A13Q9NSD5 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC3.75□□□□□ -1.81
SLC6A13Q9NSD5 ATP5HP2-201ENST00000433885 485 ntBASIC3.75□□□□□ -1.81
SLC6A13Q9NSD5 TBCAP1-201ENST00000436520 327 ntBASIC3.75□□□□□ -1.81
SLC6A13Q9NSD5 AC083863.1-201ENST00000438811 231 ntBASIC3.75□□□□□ -1.81
SLC6A13Q9NSD5 AC112653.1-201ENST00000443851 386 ntBASIC3.75□□□□□ -1.81
SLC6A13Q9NSD5 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC3.75□□□□□ -1.81
SLC6A13Q9NSD5 COX6CP12-201ENST00000446748 202 ntBASIC3.75□□□□□ -1.81
SLC6A13Q9NSD5 RPS17P13-201ENST00000448974 407 ntBASIC3.75□□□□□ -1.81
SLC6A13Q9NSD5 ANP32BP2-201ENST00000454525 545 ntBASIC3.75□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms