Protein–RNA interactions for Protein: Q9C0J9

BHLHE41, Class E basic helix-loop-helix protein 41, humanhuman

Predicted RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BHLHE41Q9C0J9 AC116667.1-201ENST00000604855 2072 ntBASIC5.28□□□□□ -1.56
BHLHE41Q9C0J9 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.28□□□□□ -1.56
BHLHE41Q9C0J9 LINC01963-201ENST00000562038 3148 ntBASIC5.28□□□□□ -1.56
BHLHE41Q9C0J9 ABCC13-202ENST00000463099 3842 ntBASIC5.28□□□□□ -1.56
BHLHE41Q9C0J9 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.28□□□□□ -1.56
BHLHE41Q9C0J9 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
BHLHE41Q9C0J9 AL137003.2-201ENST00000606924 2538 ntBASIC5.28□□□□□ -1.56
BHLHE41Q9C0J9 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
BHLHE41Q9C0J9 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
BHLHE41Q9C0J9 AC027287.1-201ENST00000553115 1453 ntBASIC5.28□□□□□ -1.56
BHLHE41Q9C0J9 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.28□□□□□ -1.56
BHLHE41Q9C0J9 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
BHLHE41Q9C0J9 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.28□□□□□ -1.56
BHLHE41Q9C0J9 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
BHLHE41Q9C0J9 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
BHLHE41Q9C0J9 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
BHLHE41Q9C0J9 RNU6-701P-201ENST00000384059 107 ntBASIC5.28□□□□□ -1.56
BHLHE41Q9C0J9 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
BHLHE41Q9C0J9 GPS2P1-201ENST00000411761 986 ntBASIC5.28□□□□□ -1.56
BHLHE41Q9C0J9 HNRNPDLP1-201ENST00000412834 550 ntBASIC5.28□□□□□ -1.56
BHLHE41Q9C0J9 RPL30P3-201ENST00000424262 333 ntBASIC5.28□□□□□ -1.56
BHLHE41Q9C0J9 AC008267.5-201ENST00000424928 265 ntBASIC5.28□□□□□ -1.56
BHLHE41Q9C0J9 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC5.28□□□□□ -1.56
BHLHE41Q9C0J9 AL353597.2-202ENST00000434901 373 ntBASIC5.28□□□□□ -1.56
BHLHE41Q9C0J9 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC5.28□□□□□ -1.56
BHLHE41Q9C0J9 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC5.28□□□□□ -1.56
BHLHE41Q9C0J9 AL162389.1-201ENST00000449233 177 ntBASIC5.28□□□□□ -1.56
BHLHE41Q9C0J9 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC5.28□□□□□ -1.56
BHLHE41Q9C0J9 RNU6ATAC28P-201ENST00000459249 118 ntBASIC5.28□□□□□ -1.56
BHLHE41Q9C0J9 OARD1-209ENST00000471367 401 ntTSL 2 BASIC5.28□□□□□ -1.56
BHLHE41Q9C0J9 RN7SL283P-201ENST00000489055 303 ntBASIC5.28□□□□□ -1.56
BHLHE41Q9C0J9 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
BHLHE41Q9C0J9 AP001086.1-201ENST00000494882 321 ntBASIC5.28□□□□□ -1.56
BHLHE41Q9C0J9 AC026801.1-201ENST00000497178 464 ntBASIC5.28□□□□□ -1.56
BHLHE41Q9C0J9 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC5.28□□□□□ -1.56
BHLHE41Q9C0J9 AC026801.2-201ENST00000515352 425 ntBASIC5.28□□□□□ -1.56
BHLHE41Q9C0J9 SNORD116.3-201ENST00000517176 78 ntBASIC5.28□□□□□ -1.56
BHLHE41Q9C0J9 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
BHLHE41Q9C0J9 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.28□□□□□ -1.56
BHLHE41Q9C0J9 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC5.28□□□□□ -1.56
BHLHE41Q9C0J9 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC5.28□□□□□ -1.56
BHLHE41Q9C0J9 AC113195.1-201ENST00000579952 141 ntBASIC5.28□□□□□ -1.56
BHLHE41Q9C0J9 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.28□□□□□ -1.56
BHLHE41Q9C0J9 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
BHLHE41Q9C0J9 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
BHLHE41Q9C0J9 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC5.28□□□□□ -1.56
BHLHE41Q9C0J9 AC006254.3-201ENST00000603353 884 ntBASIC5.28□□□□□ -1.56
BHLHE41Q9C0J9 RN7SL544P-201ENST00000617232 284 ntBASIC5.28□□□□□ -1.56
BHLHE41Q9C0J9 RN7SL763P-201ENST00000620922 284 ntBASIC5.28□□□□□ -1.56
BHLHE41Q9C0J9 uc_338.7-201ENST00000621834 124 ntBASIC5.28□□□□□ -1.56
BHLHE41Q9C0J9 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
BHLHE41Q9C0J9 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC5.28□□□□□ -1.56
BHLHE41Q9C0J9 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
BHLHE41Q9C0J9 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.28□□□□□ -1.56
BHLHE41Q9C0J9 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.28□□□□□ -1.56
BHLHE41Q9C0J9 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.28□□□□□ -1.56
BHLHE41Q9C0J9 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
BHLHE41Q9C0J9 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
BHLHE41Q9C0J9 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
BHLHE41Q9C0J9 ST7-212ENST00000422922 1887 ntTSL 5 BASIC5.28□□□□□ -1.56
BHLHE41Q9C0J9 AP005435.3-201ENST00000531260 3198 ntBASIC5.28□□□□□ -1.56
BHLHE41Q9C0J9 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
BHLHE41Q9C0J9 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
BHLHE41Q9C0J9 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
BHLHE41Q9C0J9 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.27□□□□□ -1.57
BHLHE41Q9C0J9 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
BHLHE41Q9C0J9 AC005592.1-201ENST00000566527 1640 ntBASIC5.27□□□□□ -1.57
BHLHE41Q9C0J9 AL158163.1-201ENST00000603915 1649 ntBASIC5.27□□□□□ -1.57
BHLHE41Q9C0J9 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC5.27□□□□□ -1.57
BHLHE41Q9C0J9 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
BHLHE41Q9C0J9 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
BHLHE41Q9C0J9 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC5.27□□□□□ -1.57
BHLHE41Q9C0J9 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
BHLHE41Q9C0J9 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
BHLHE41Q9C0J9 RNU6-715P-201ENST00000365204 103 ntBASIC5.27□□□□□ -1.57
BHLHE41Q9C0J9 Y_RNA.389-201ENST00000383924 113 ntBASIC5.27□□□□□ -1.57
BHLHE41Q9C0J9 RNU6-26P-201ENST00000383985 107 ntBASIC5.27□□□□□ -1.57
BHLHE41Q9C0J9 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC5.27□□□□□ -1.57
BHLHE41Q9C0J9 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC5.27□□□□□ -1.57
BHLHE41Q9C0J9 AC007161.1-204ENST00000423039 460 ntBASIC5.27□□□□□ -1.57
BHLHE41Q9C0J9 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
BHLHE41Q9C0J9 STK31-205ENST00000433467 3085 ntTSL 2 BASIC5.27□□□□□ -1.57
BHLHE41Q9C0J9 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC5.27□□□□□ -1.57
BHLHE41Q9C0J9 MTCO3P45-201ENST00000443036 613 ntBASIC5.27□□□□□ -1.57
BHLHE41Q9C0J9 CYCSP24-201ENST00000445119 316 ntBASIC5.27□□□□□ -1.57
BHLHE41Q9C0J9 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.27□□□□□ -1.57
BHLHE41Q9C0J9 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC5.27□□□□□ -1.57
BHLHE41Q9C0J9 AC092451.1-201ENST00000480211 153 ntBASIC5.27□□□□□ -1.57
BHLHE41Q9C0J9 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
BHLHE41Q9C0J9 AC091912.1-201ENST00000511351 248 ntBASIC5.27□□□□□ -1.57
BHLHE41Q9C0J9 AC114781.3-201ENST00000512083 142 ntBASIC5.27□□□□□ -1.57
BHLHE41Q9C0J9 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC5.27□□□□□ -1.57
BHLHE41Q9C0J9 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.27□□□□□ -1.57
BHLHE41Q9C0J9 RNU6-390P-201ENST00000516259 103 ntBASIC5.27□□□□□ -1.57
BHLHE41Q9C0J9 SNORA70.20-201ENST00000516848 126 ntBASIC5.27□□□□□ -1.57
BHLHE41Q9C0J9 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC5.27□□□□□ -1.57
BHLHE41Q9C0J9 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC5.27□□□□□ -1.57
BHLHE41Q9C0J9 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC5.27□□□□□ -1.57
BHLHE41Q9C0J9 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.27□□□□□ -1.57
BHLHE41Q9C0J9 PYM1-205ENST00000547925 499 ntTSL 3 BASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms