Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 OR4R2P-201ENST00000530815 597 ntBASIC1.5□□□□□ -2.17
CSMD3Q7Z407 AC123904.3-201ENST00000547218 814 ntBASIC1.5□□□□□ -2.17
CSMD3Q7Z407 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC1.5□□□□□ -2.17
CSMD3Q7Z407 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.5□□□□□ -2.17
CSMD3Q7Z407 AL845331.3-202ENST00000562856 261 ntBASIC1.5□□□□□ -2.17
CSMD3Q7Z407 MIR3186-201ENST00000577404 85 ntBASIC1.5□□□□□ -2.17
CSMD3Q7Z407 AC017076.1-201ENST00000607613 578 ntBASIC1.5□□□□□ -2.17
CSMD3Q7Z407 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC1.5□□□□□ -2.17
CSMD3Q7Z407 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
CSMD3Q7Z407 MIR583-201ENST00000384846 75 ntBASIC1.49□□□□□ -2.17
CSMD3Q7Z407 HMGB1P10-201ENST00000395823 563 ntBASIC1.49□□□□□ -2.17
CSMD3Q7Z407 PTP4A1P1-201ENST00000420539 515 ntBASIC1.49□□□□□ -2.17
CSMD3Q7Z407 AL450263.2-201ENST00000439400 589 ntBASIC1.49□□□□□ -2.17
CSMD3Q7Z407 LAMTOR5P1-201ENST00000444290 270 ntBASIC1.49□□□□□ -2.17
CSMD3Q7Z407 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC1.49□□□□□ -2.17
CSMD3Q7Z407 EIF2S2P4-201ENST00000461070 984 ntBASIC1.49□□□□□ -2.17
CSMD3Q7Z407 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC1.49□□□□□ -2.17
CSMD3Q7Z407 RPS27AP18-201ENST00000515536 459 ntBASIC1.49□□□□□ -2.17
CSMD3Q7Z407 HMGB1P41-201ENST00000520234 440 ntBASIC1.49□□□□□ -2.17
CSMD3Q7Z407 AC091046.2-201ENST00000620775 665 ntBASIC1.49□□□□□ -2.17
CSMD3Q7Z407 CU459211.1-201ENST00000635667 749 ntBASIC1.49□□□□□ -2.17
CSMD3Q7Z407 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
CSMD3Q7Z407 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
CSMD3Q7Z407 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
CSMD3Q7Z407 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.49□□□□□ -2.17
CSMD3Q7Z407 SNORA11.4-201ENST00000408823 129 ntBASIC1.49□□□□□ -2.17
CSMD3Q7Z407 IPMKP1-201ENST00000425988 855 ntBASIC1.49□□□□□ -2.17
CSMD3Q7Z407 RPL36AP6-201ENST00000435770 321 ntBASIC1.49□□□□□ -2.17
CSMD3Q7Z407 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC1.49□□□□□ -2.17
CSMD3Q7Z407 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC1.49□□□□□ -2.17
CSMD3Q7Z407 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
CSMD3Q7Z407 AL118496.1-201ENST00000440201 1812 ntBASIC1.49□□□□□ -2.17
CSMD3Q7Z407 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
CSMD3Q7Z407 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
CSMD3Q7Z407 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
CSMD3Q7Z407 FGF7P8-201ENST00000402994 292 ntBASIC1.49□□□□□ -2.17
CSMD3Q7Z407 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
CSMD3Q7Z407 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC1.49□□□□□ -2.17
CSMD3Q7Z407 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC1.49□□□□□ -2.17
CSMD3Q7Z407 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC1.49□□□□□ -2.17
CSMD3Q7Z407 AC092991.1-201ENST00000477176 376 ntBASIC1.49□□□□□ -2.17
CSMD3Q7Z407 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC1.49□□□□□ -2.17
CSMD3Q7Z407 CCNHP1-201ENST00000513311 678 ntBASIC1.49□□□□□ -2.17
CSMD3Q7Z407 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC1.49□□□□□ -2.17
CSMD3Q7Z407 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC1.49□□□□□ -2.17
CSMD3Q7Z407 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
CSMD3Q7Z407 XKRY2-202ENST00000623874 1581 ntBASIC1.49□□□□□ -2.17
CSMD3Q7Z407 XKRY-202ENST00000624960 1581 ntBASIC1.49□□□□□ -2.17
CSMD3Q7Z407 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC1.48□□□□□ -2.17
CSMD3Q7Z407 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
CSMD3Q7Z407 RNA5SP210-201ENST00000391034 120 ntBASIC1.48□□□□□ -2.17
CSMD3Q7Z407 POLR2J4-204ENST00000418424 324 ntBASIC1.48□□□□□ -2.17
CSMD3Q7Z407 TRIM60P8Y-201ENST00000436338 762 ntBASIC1.48□□□□□ -2.17
CSMD3Q7Z407 MTAPP1-201ENST00000489154 819 ntBASIC1.48□□□□□ -2.17
CSMD3Q7Z407 AC104090.1-201ENST00000506341 1171 ntBASIC1.48□□□□□ -2.17
CSMD3Q7Z407 RFPL1S-203ENST00000539579 330 ntBASIC1.48□□□□□ -2.17
CSMD3Q7Z407 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC1.48□□□□□ -2.17
CSMD3Q7Z407 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC1.48□□□□□ -2.17
CSMD3Q7Z407 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC1.48□□□□□ -2.17
CSMD3Q7Z407 MIR96-201ENST00000362288 78 ntBASIC1.48□□□□□ -2.17
CSMD3Q7Z407 Y_RNA.224-201ENST00000364308 111 ntBASIC1.48□□□□□ -2.17
CSMD3Q7Z407 AC004965.1-201ENST00000413033 213 ntBASIC1.48□□□□□ -2.17
CSMD3Q7Z407 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC1.48□□□□□ -2.17
CSMD3Q7Z407 AC245517.5-201ENST00000611529 162 ntBASIC1.48□□□□□ -2.17
CSMD3Q7Z407 MIR6766-201ENST00000622641 72 ntBASIC1.48□□□□□ -2.17
CSMD3Q7Z407 AP006248.2-201ENST00000623309 592 ntBASIC1.48□□□□□ -2.17
CSMD3Q7Z407 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC1.48□□□□□ -2.17
CSMD3Q7Z407 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
CSMD3Q7Z407 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
CSMD3Q7Z407 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
CSMD3Q7Z407 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
CSMD3Q7Z407 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC1.48□□□□□ -2.17
CSMD3Q7Z407 AC009237.2-201ENST00000421358 284 ntBASIC1.48□□□□□ -2.17
CSMD3Q7Z407 RPS24P8-201ENST00000431490 402 ntBASIC1.48□□□□□ -2.17
CSMD3Q7Z407 MIR5007-201ENST00000583098 95 ntBASIC1.48□□□□□ -2.17
CSMD3Q7Z407 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
CSMD3Q7Z407 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
CSMD3Q7Z407 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC1.47□□□□□ -2.17
CSMD3Q7Z407 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
CSMD3Q7Z407 AC019155.1-201ENST00000382242 574 ntBASIC1.47□□□□□ -2.17
CSMD3Q7Z407 AL354719.1-201ENST00000406535 843 ntBASIC1.47□□□□□ -2.17
CSMD3Q7Z407 RNU6ATAC40P-201ENST00000408580 137 ntBASIC1.47□□□□□ -2.17
CSMD3Q7Z407 RNU4-62P-201ENST00000410125 130 ntBASIC1.47□□□□□ -2.17
CSMD3Q7Z407 AC234782.4-201ENST00000417646 1048 ntBASIC1.47□□□□□ -2.17
CSMD3Q7Z407 AC009969.1-201ENST00000438726 172 ntBASIC1.47□□□□□ -2.17
CSMD3Q7Z407 RNU6-964P-201ENST00000516524 69 ntBASIC1.47□□□□□ -2.17
CSMD3Q7Z407 AC126177.3-201ENST00000551839 688 ntBASIC1.47□□□□□ -2.17
CSMD3Q7Z407 SUB1P3-201ENST00000564581 315 ntBASIC1.47□□□□□ -2.17
CSMD3Q7Z407 AMZ2P1-203ENST00000565833 850 ntBASIC1.47□□□□□ -2.17
CSMD3Q7Z407 AL360085.1-201ENST00000604713 532 ntBASIC1.47□□□□□ -2.17
CSMD3Q7Z407 AP004372.1-201ENST00000604842 844 ntBASIC1.47□□□□□ -2.17
CSMD3Q7Z407 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC1.47□□□□□ -2.17
CSMD3Q7Z407 AC093591.3-201ENST00000634516 308 ntBASIC1.47□□□□□ -2.17
CSMD3Q7Z407 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC1.47□□□□□ -2.17
CSMD3Q7Z407 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC1.47□□□□□ -2.17
CSMD3Q7Z407 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
CSMD3Q7Z407 HSP90AA5P-201ENST00000438353 2192 ntBASIC1.47□□□□□ -2.17
CSMD3Q7Z407 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
CSMD3Q7Z407 RNU6-1320P-201ENST00000390838 107 ntBASIC1.47□□□□□ -2.17
CSMD3Q7Z407 RNU6-1269P-201ENST00000391139 107 ntBASIC1.47□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms