Protein–RNA interactions for Protein: Q70EL4

USP43, Ubiquitin carboxyl-terminal hydrolase 43, humanhuman

Predictions only

Length 1,123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP43Q70EL4 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC3.77□□□□□ -1.81
USP43Q70EL4 AP001781.1-201ENST00000530977 207 ntBASIC3.77□□□□□ -1.81
USP43Q70EL4 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC3.77□□□□□ -1.81
USP43Q70EL4 AC063950.1-201ENST00000552036 308 ntBASIC3.77□□□□□ -1.81
USP43Q70EL4 AC124947.2-202ENST00000552735 133 ntBASIC3.77□□□□□ -1.81
USP43Q70EL4 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC3.77□□□□□ -1.81
USP43Q70EL4 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.77□□□□□ -1.81
USP43Q70EL4 AC068276.1-201ENST00000605793 379 ntBASIC3.77□□□□□ -1.81
USP43Q70EL4 AC012360.2-201ENST00000609349 391 ntBASIC3.77□□□□□ -1.81
USP43Q70EL4 AC131902.3-201ENST00000611767 581 ntBASIC3.77□□□□□ -1.81
USP43Q70EL4 USP12-203ENST00000620323 349 ntTSL 3 BASIC3.77□□□□□ -1.81
USP43Q70EL4 FRG1KP-201ENST00000623592 341 ntBASIC3.77□□□□□ -1.81
USP43Q70EL4 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC3.77□□□□□ -1.81
USP43Q70EL4 AL773545.4-201ENST00000637262 310 ntBASIC3.77□□□□□ -1.81
USP43Q70EL4 AL513478.4-201ENST00000641636 310 ntBASIC3.77□□□□□ -1.81
USP43Q70EL4 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.77□□□□□ -1.81
USP43Q70EL4 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
USP43Q70EL4 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
USP43Q70EL4 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
USP43Q70EL4 GTF2H2B-203ENST00000508065 1432 ntBASIC3.77□□□□□ -1.81
USP43Q70EL4 LINC00561-201ENST00000565815 2738 ntBASIC3.77□□□□□ -1.81
USP43Q70EL4 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
USP43Q70EL4 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
USP43Q70EL4 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.76□□□□□ -1.81
USP43Q70EL4 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC3.76□□□□□ -1.81
USP43Q70EL4 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
USP43Q70EL4 PRO1804-201ENST00000623780 2050 ntBASIC3.76□□□□□ -1.81
USP43Q70EL4 ST7-212ENST00000422922 1887 ntTSL 5 BASIC3.76□□□□□ -1.81
USP43Q70EL4 Y_RNA.18-201ENST00000362461 102 ntBASIC3.76□□□□□ -1.81
USP43Q70EL4 RNU1-18P-201ENST00000363062 164 ntBASIC3.76□□□□□ -1.81
USP43Q70EL4 Y_RNA.162-201ENST00000363683 102 ntBASIC3.76□□□□□ -1.81
USP43Q70EL4 SNORA4.1-201ENST00000364263 144 ntBASIC3.76□□□□□ -1.81
USP43Q70EL4 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
USP43Q70EL4 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.76□□□□□ -1.81
USP43Q70EL4 MIR525-201ENST00000384978 85 ntBASIC3.76□□□□□ -1.81
USP43Q70EL4 MIR181A1-201ENST00000385026 110 ntBASIC3.76□□□□□ -1.81
USP43Q70EL4 MT-TL1-201ENST00000386347 75 ntBASIC3.76□□□□□ -1.81
USP43Q70EL4 HMGN2P8-201ENST00000391458 268 ntBASIC3.76□□□□□ -1.81
USP43Q70EL4 CIR1P3-201ENST00000405137 479 ntBASIC3.76□□□□□ -1.81
USP43Q70EL4 RPL21P32-201ENST00000419877 477 ntBASIC3.76□□□□□ -1.81
USP43Q70EL4 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC3.76□□□□□ -1.81
USP43Q70EL4 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC3.76□□□□□ -1.81
USP43Q70EL4 RPL7P29-201ENST00000437151 728 ntBASIC3.76□□□□□ -1.81
USP43Q70EL4 AC092427.1-201ENST00000439177 601 ntBASIC3.76□□□□□ -1.81
USP43Q70EL4 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.76□□□□□ -1.81
USP43Q70EL4 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC3.76□□□□□ -1.81
USP43Q70EL4 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC3.76□□□□□ -1.81
USP43Q70EL4 MTND4P19-201ENST00000446659 478 ntBASIC3.76□□□□□ -1.81
USP43Q70EL4 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC3.76□□□□□ -1.81
USP43Q70EL4 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC3.76□□□□□ -1.81
USP43Q70EL4 SSXP1-201ENST00000453640 473 ntBASIC3.76□□□□□ -1.81
USP43Q70EL4 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
USP43Q70EL4 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC3.76□□□□□ -1.81
USP43Q70EL4 PNPLA4P1-201ENST00000458328 305 ntBASIC3.76□□□□□ -1.81
USP43Q70EL4 OR9M1P-201ENST00000459641 921 ntBASIC3.76□□□□□ -1.81
USP43Q70EL4 MTND1P16-201ENST00000465177 898 ntBASIC3.76□□□□□ -1.81
USP43Q70EL4 AC010307.1-201ENST00000467206 836 ntBASIC3.76□□□□□ -1.81
USP43Q70EL4 AC092989.1-201ENST00000481235 277 ntBASIC3.76□□□□□ -1.81
USP43Q70EL4 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC3.76□□□□□ -1.81
USP43Q70EL4 AC005912.1-201ENST00000495392 255 ntBASIC3.76□□□□□ -1.81
USP43Q70EL4 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC3.76□□□□□ -1.81
USP43Q70EL4 MTND3P22-201ENST00000510932 243 ntBASIC3.76□□□□□ -1.81
USP43Q70EL4 AC021146.1-201ENST00000511202 716 ntBASIC3.76□□□□□ -1.81
USP43Q70EL4 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC3.76□□□□□ -1.81
USP43Q70EL4 HMGB1P23-201ENST00000518743 568 ntBASIC3.76□□□□□ -1.81
USP43Q70EL4 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
USP43Q70EL4 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC3.76□□□□□ -1.81
USP43Q70EL4 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC3.76□□□□□ -1.81
USP43Q70EL4 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC3.76□□□□□ -1.81
USP43Q70EL4 AC068831.4-201ENST00000556118 109 ntBASIC3.76□□□□□ -1.81
USP43Q70EL4 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC3.76□□□□□ -1.81
USP43Q70EL4 MIR3939-201ENST00000582614 106 ntBASIC3.76□□□□□ -1.81
USP43Q70EL4 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC3.76□□□□□ -1.81
USP43Q70EL4 DUXAP4-201ENST00000603046 613 ntBASIC3.76□□□□□ -1.81
USP43Q70EL4 AC104662.1-201ENST00000604448 511 ntBASIC3.76□□□□□ -1.81
USP43Q70EL4 AL390816.3-201ENST00000604527 1066 ntBASIC3.76□□□□□ -1.81
USP43Q70EL4 AL162730.1-201ENST00000605734 292 ntBASIC3.76□□□□□ -1.81
USP43Q70EL4 AC104458.1-201ENST00000608243 463 ntBASIC3.76□□□□□ -1.81
USP43Q70EL4 AC123768.4-201ENST00000616244 701 ntBASIC3.76□□□□□ -1.81
USP43Q70EL4 AC069209.1-201ENST00000619282 651 ntBASIC3.76□□□□□ -1.81
USP43Q70EL4 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC3.76□□□□□ -1.81
USP43Q70EL4 AC025048.6-202ENST00000627667 438 ntBASIC3.76□□□□□ -1.81
USP43Q70EL4 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.76□□□□□ -1.81
USP43Q70EL4 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
USP43Q70EL4 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
USP43Q70EL4 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
USP43Q70EL4 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
USP43Q70EL4 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.76□□□□□ -1.81
USP43Q70EL4 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.76□□□□□ -1.81
USP43Q70EL4 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
USP43Q70EL4 DCAF13P3-201ENST00000561147 1334 ntBASIC3.75□□□□□ -1.81
USP43Q70EL4 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.75□□□□□ -1.81
USP43Q70EL4 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.75□□□□□ -1.81
USP43Q70EL4 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.75□□□□□ -1.81
USP43Q70EL4 HMGB1P5-201ENST00000255320 642 ntBASIC3.75□□□□□ -1.81
USP43Q70EL4 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
USP43Q70EL4 RN7SKP226-201ENST00000364912 300 ntBASIC3.75□□□□□ -1.81
USP43Q70EL4 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC3.75□□□□□ -1.81
USP43Q70EL4 RNU6-98P-201ENST00000384173 107 ntBASIC3.75□□□□□ -1.81
USP43Q70EL4 MIR217-201ENST00000384817 110 ntBASIC3.75□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 113.6 ms