Protein–RNA interactions for Protein: Q5VWJ9

SNX30, Sorting nexin-30, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX30Q5VWJ9 UBDP1-202ENST00000457888 382 ntBASIC3.99□□□□□ -1.77
SNX30Q5VWJ9 snoU13.4-201ENST00000458916 104 ntBASIC3.99□□□□□ -1.77
SNX30Q5VWJ9 VN1R17P-201ENST00000472048 1090 ntBASIC3.99□□□□□ -1.77
SNX30Q5VWJ9 ACTR3P3-201ENST00000480448 893 ntBASIC3.99□□□□□ -1.77
SNX30Q5VWJ9 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC3.99□□□□□ -1.77
SNX30Q5VWJ9 RPL7P47-201ENST00000497299 556 ntBASIC3.99□□□□□ -1.77
SNX30Q5VWJ9 AC098862.1-201ENST00000504991 413 ntBASIC3.99□□□□□ -1.77
SNX30Q5VWJ9 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC3.99□□□□□ -1.77
SNX30Q5VWJ9 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC3.99□□□□□ -1.77
SNX30Q5VWJ9 AC004062.1-201ENST00000509926 645 ntBASIC3.99□□□□□ -1.77
SNX30Q5VWJ9 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC3.99□□□□□ -1.77
SNX30Q5VWJ9 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC3.99□□□□□ -1.77
SNX30Q5VWJ9 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC3.99□□□□□ -1.77
SNX30Q5VWJ9 CR383656.7-201ENST00000548164 174 ntBASIC3.99□□□□□ -1.77
SNX30Q5VWJ9 ELOCP32-201ENST00000548625 324 ntBASIC3.99□□□□□ -1.77
SNX30Q5VWJ9 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
SNX30Q5VWJ9 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC3.99□□□□□ -1.77
SNX30Q5VWJ9 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.99□□□□□ -1.77
SNX30Q5VWJ9 MIR4999-201ENST00000585029 91 ntBASIC3.99□□□□□ -1.77
SNX30Q5VWJ9 AL353997.4-201ENST00000586196 166 ntBASIC3.99□□□□□ -1.77
SNX30Q5VWJ9 AC012669.1-201ENST00000603209 283 ntBASIC3.99□□□□□ -1.77
SNX30Q5VWJ9 AL133507.1-201ENST00000605269 557 ntBASIC3.99□□□□□ -1.77
SNX30Q5VWJ9 AC090186.1-201ENST00000605991 572 ntBASIC3.99□□□□□ -1.77
SNX30Q5VWJ9 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.99□□□□□ -1.77
SNX30Q5VWJ9 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC3.99□□□□□ -1.77
SNX30Q5VWJ9 AL391261.4-201ENST00000616012 481 ntBASIC3.99□□□□□ -1.77
SNX30Q5VWJ9 AL355493.4-201ENST00000618530 292 ntBASIC3.99□□□□□ -1.77
SNX30Q5VWJ9 AC048347.1-201ENST00000624621 427 ntBASIC3.99□□□□□ -1.77
SNX30Q5VWJ9 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
SNX30Q5VWJ9 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
SNX30Q5VWJ9 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
SNX30Q5VWJ9 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
SNX30Q5VWJ9 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.99□□□□□ -1.77
SNX30Q5VWJ9 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
SNX30Q5VWJ9 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
SNX30Q5VWJ9 TNPO1P3-201ENST00000436471 2662 ntBASIC3.98□□□□□ -1.77
SNX30Q5VWJ9 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
SNX30Q5VWJ9 ZNF542P-204ENST00000482727 1305 ntBASIC3.98□□□□□ -1.77
SNX30Q5VWJ9 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
SNX30Q5VWJ9 IPO8P1-201ENST00000455509 3109 ntBASIC3.98□□□□□ -1.77
SNX30Q5VWJ9 AL133383.2-201ENST00000622958 2336 ntBASIC3.98□□□□□ -1.77
SNX30Q5VWJ9 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
SNX30Q5VWJ9 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
SNX30Q5VWJ9 Y_RNA.18-201ENST00000362461 102 ntBASIC3.98□□□□□ -1.77
SNX30Q5VWJ9 SNORA62.3-201ENST00000365110 153 ntBASIC3.98□□□□□ -1.77
SNX30Q5VWJ9 RNU5A-2P-201ENST00000384337 116 ntBASIC3.98□□□□□ -1.77
SNX30Q5VWJ9 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC3.98□□□□□ -1.77
SNX30Q5VWJ9 PIGPP2-201ENST00000411569 458 ntBASIC3.98□□□□□ -1.77
SNX30Q5VWJ9 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC3.98□□□□□ -1.77
SNX30Q5VWJ9 RPS15AP38-201ENST00000413110 372 ntBASIC3.98□□□□□ -1.77
SNX30Q5VWJ9 RPL30P2-201ENST00000414021 291 ntBASIC3.98□□□□□ -1.77
SNX30Q5VWJ9 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC3.98□□□□□ -1.77
SNX30Q5VWJ9 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
SNX30Q5VWJ9 AL139247.1-201ENST00000422768 325 ntBASIC3.98□□□□□ -1.77
SNX30Q5VWJ9 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.98□□□□□ -1.77
SNX30Q5VWJ9 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC3.98□□□□□ -1.77
SNX30Q5VWJ9 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.98□□□□□ -1.77
SNX30Q5VWJ9 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.98□□□□□ -1.77
SNX30Q5VWJ9 AL353691.1-201ENST00000451332 387 ntBASIC3.98□□□□□ -1.77
SNX30Q5VWJ9 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC3.98□□□□□ -1.77
SNX30Q5VWJ9 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC3.98□□□□□ -1.77
SNX30Q5VWJ9 AC091564.1-201ENST00000464563 479 ntBASIC3.98□□□□□ -1.77
SNX30Q5VWJ9 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC3.98□□□□□ -1.77
SNX30Q5VWJ9 LINC00888-204ENST00000487386 421 ntBASIC3.98□□□□□ -1.77
SNX30Q5VWJ9 AHI1-208ENST00000488690 712 ntTSL 5 BASIC3.98□□□□□ -1.77
SNX30Q5VWJ9 AL024509.2-201ENST00000493462 493 ntBASIC3.98□□□□□ -1.77
SNX30Q5VWJ9 RPL23AP55-201ENST00000498163 452 ntBASIC3.98□□□□□ -1.77
SNX30Q5VWJ9 UBE2CP3-201ENST00000502715 450 ntBASIC3.98□□□□□ -1.77
SNX30Q5VWJ9 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.98□□□□□ -1.77
SNX30Q5VWJ9 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.98□□□□□ -1.77
SNX30Q5VWJ9 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC3.98□□□□□ -1.77
SNX30Q5VWJ9 AC093677.1-201ENST00000514414 678 ntBASIC3.98□□□□□ -1.77
SNX30Q5VWJ9 TRMT10BP1-201ENST00000519377 943 ntBASIC3.98□□□□□ -1.77
SNX30Q5VWJ9 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC3.98□□□□□ -1.77
SNX30Q5VWJ9 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC3.98□□□□□ -1.77
SNX30Q5VWJ9 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC3.98□□□□□ -1.77
SNX30Q5VWJ9 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.98□□□□□ -1.77
SNX30Q5VWJ9 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC3.98□□□□□ -1.77
SNX30Q5VWJ9 AC087481.2-201ENST00000565492 330 ntBASIC3.98□□□□□ -1.77
SNX30Q5VWJ9 ISCA1P3-201ENST00000577104 373 ntBASIC3.98□□□□□ -1.77
SNX30Q5VWJ9 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.98□□□□□ -1.77
SNX30Q5VWJ9 MIR4429-201ENST00000580105 73 ntBASIC3.98□□□□□ -1.77
SNX30Q5VWJ9 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC3.98□□□□□ -1.77
SNX30Q5VWJ9 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC3.98□□□□□ -1.77
SNX30Q5VWJ9 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.98□□□□□ -1.77
SNX30Q5VWJ9 NIFKP6-201ENST00000598115 845 ntBASIC3.98□□□□□ -1.77
SNX30Q5VWJ9 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC3.98□□□□□ -1.77
SNX30Q5VWJ9 AC103710.3-201ENST00000608157 948 ntBASIC3.98□□□□□ -1.77
SNX30Q5VWJ9 AL607023.1-201ENST00000620045 248 ntBASIC3.98□□□□□ -1.77
SNX30Q5VWJ9 AC018816.2-201ENST00000621460 353 ntBASIC3.98□□□□□ -1.77
SNX30Q5VWJ9 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.98□□□□□ -1.77
SNX30Q5VWJ9 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.98□□□□□ -1.77
SNX30Q5VWJ9 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
SNX30Q5VWJ9 AC024560.2-201ENST00000507981 1497 ntBASIC3.98□□□□□ -1.77
SNX30Q5VWJ9 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.98□□□□□ -1.77
SNX30Q5VWJ9 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.97□□□□□ -1.77
SNX30Q5VWJ9 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
SNX30Q5VWJ9 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
SNX30Q5VWJ9 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
SNX30Q5VWJ9 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 92.9 ms