Protein–RNA interactions for Protein: Q2Q1W2

TRIM71, E3 ubiquitin-protein ligase TRIM71, humanhuman

Known RBP Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM71Q2Q1W2 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.46□□□□□ -1.7
TRIM71Q2Q1W2 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.46□□□□□ -1.7
TRIM71Q2Q1W2 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
TRIM71Q2Q1W2 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
TRIM71Q2Q1W2 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.45□□□□□ -1.7
TRIM71Q2Q1W2 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
TRIM71Q2Q1W2 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
TRIM71Q2Q1W2 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.45□□□□□ -1.7
TRIM71Q2Q1W2 RPL23AP57-201ENST00000332361 466 ntBASIC4.45□□□□□ -1.7
TRIM71Q2Q1W2 RNU6-433P-201ENST00000363216 104 ntBASIC4.45□□□□□ -1.7
TRIM71Q2Q1W2 RNA5SP387-201ENST00000364226 106 ntBASIC4.45□□□□□ -1.7
TRIM71Q2Q1W2 RNU6-878P-201ENST00000384578 110 ntBASIC4.45□□□□□ -1.7
TRIM71Q2Q1W2 MIR30B-201ENST00000384850 88 ntBASIC4.45□□□□□ -1.7
TRIM71Q2Q1W2 RNU6-952P-201ENST00000391164 108 ntBASIC4.45□□□□□ -1.7
TRIM71Q2Q1W2 HDGFP1-201ENST00000405943 252 ntBASIC4.45□□□□□ -1.7
TRIM71Q2Q1W2 AC007899.1-201ENST00000412776 775 ntBASIC4.45□□□□□ -1.7
TRIM71Q2Q1W2 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.45□□□□□ -1.7
TRIM71Q2Q1W2 AC069157.1-201ENST00000421749 137 ntBASIC4.45□□□□□ -1.7
TRIM71Q2Q1W2 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC4.45□□□□□ -1.7
TRIM71Q2Q1W2 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC4.45□□□□□ -1.7
TRIM71Q2Q1W2 AL645939.1-201ENST00000453429 797 ntBASIC4.45□□□□□ -1.7
TRIM71Q2Q1W2 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC4.45□□□□□ -1.7
TRIM71Q2Q1W2 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC4.45□□□□□ -1.7
TRIM71Q2Q1W2 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC4.45□□□□□ -1.7
TRIM71Q2Q1W2 AC087276.1-201ENST00000529659 480 ntBASIC4.45□□□□□ -1.7
TRIM71Q2Q1W2 OR8L1P-201ENST00000534005 955 ntBASIC4.45□□□□□ -1.7
TRIM71Q2Q1W2 AC024224.1-201ENST00000538284 609 ntBASIC4.45□□□□□ -1.7
TRIM71Q2Q1W2 YPEL5P3-201ENST00000547227 352 ntBASIC4.45□□□□□ -1.7
TRIM71Q2Q1W2 AC063950.1-201ENST00000552036 308 ntBASIC4.45□□□□□ -1.7
TRIM71Q2Q1W2 PCMTD1P2-201ENST00000565017 355 ntBASIC4.45□□□□□ -1.7
TRIM71Q2Q1W2 AC087481.2-201ENST00000565492 330 ntBASIC4.45□□□□□ -1.7
TRIM71Q2Q1W2 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.45□□□□□ -1.7
TRIM71Q2Q1W2 AC008507.1-201ENST00000587506 734 ntBASIC4.45□□□□□ -1.7
TRIM71Q2Q1W2 RPL23AP92-201ENST00000603609 255 ntBASIC4.45□□□□□ -1.7
TRIM71Q2Q1W2 AC115621.1-201ENST00000604653 858 ntBASIC4.45□□□□□ -1.7
TRIM71Q2Q1W2 AL031775.1-201ENST00000607014 887 ntBASIC4.45□□□□□ -1.7
TRIM71Q2Q1W2 AP001596.2-201ENST00000608410 312 ntBASIC4.45□□□□□ -1.7
TRIM71Q2Q1W2 AC103710.4-201ENST00000609301 899 ntBASIC4.45□□□□□ -1.7
TRIM71Q2Q1W2 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC4.45□□□□□ -1.7
TRIM71Q2Q1W2 AC010678.1-201ENST00000614118 713 ntBASIC4.45□□□□□ -1.7
TRIM71Q2Q1W2 MIR4727-201ENST00000622232 55 ntBASIC4.45□□□□□ -1.7
TRIM71Q2Q1W2 AC090229.1-201ENST00000590983 1609 ntBASIC4.45□□□□□ -1.7
TRIM71Q2Q1W2 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
TRIM71Q2Q1W2 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
TRIM71Q2Q1W2 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.45□□□□□ -1.7
TRIM71Q2Q1W2 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
TRIM71Q2Q1W2 Z82217.1-201ENST00000625157 8149 ntBASIC4.44□□□□□ -1.7
TRIM71Q2Q1W2 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.44□□□□□ -1.7
TRIM71Q2Q1W2 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.44□□□□□ -1.7
TRIM71Q2Q1W2 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
TRIM71Q2Q1W2 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
TRIM71Q2Q1W2 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.44□□□□□ -1.7
TRIM71Q2Q1W2 RNA5SP119-201ENST00000362715 117 ntBASIC4.44□□□□□ -1.7
TRIM71Q2Q1W2 ESD-201ENST00000378697 1079 ntTSL 5 BASIC4.44□□□□□ -1.7
TRIM71Q2Q1W2 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC4.44□□□□□ -1.7
TRIM71Q2Q1W2 TPMTP2-201ENST00000414372 726 ntBASIC4.44□□□□□ -1.7
TRIM71Q2Q1W2 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC4.44□□□□□ -1.7
TRIM71Q2Q1W2 MTND1P23-201ENST00000416931 372 ntBASIC4.44□□□□□ -1.7
TRIM71Q2Q1W2 MTATP6P27-201ENST00000416987 621 ntBASIC4.44□□□□□ -1.7
TRIM71Q2Q1W2 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC4.44□□□□□ -1.7
TRIM71Q2Q1W2 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC4.44□□□□□ -1.7
TRIM71Q2Q1W2 OR2B8P-201ENST00000432841 938 ntBASIC4.44□□□□□ -1.7
TRIM71Q2Q1W2 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.44□□□□□ -1.7
TRIM71Q2Q1W2 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.44□□□□□ -1.7
TRIM71Q2Q1W2 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC4.44□□□□□ -1.7
TRIM71Q2Q1W2 BX322784.1-201ENST00000455793 1077 ntBASIC4.44□□□□□ -1.7
TRIM71Q2Q1W2 RPL36AP13-201ENST00000457490 317 ntBASIC4.44□□□□□ -1.7
TRIM71Q2Q1W2 AL139099.1-201ENST00000497398 403 ntBASIC4.44□□□□□ -1.7
TRIM71Q2Q1W2 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC4.44□□□□□ -1.7
TRIM71Q2Q1W2 PAICSP4-201ENST00000517543 1253 ntBASIC4.44□□□□□ -1.7
TRIM71Q2Q1W2 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC4.44□□□□□ -1.7
TRIM71Q2Q1W2 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.44□□□□□ -1.7
TRIM71Q2Q1W2 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC4.44□□□□□ -1.7
TRIM71Q2Q1W2 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC4.44□□□□□ -1.7
TRIM71Q2Q1W2 CBX3P5-201ENST00000552017 521 ntBASIC4.44□□□□□ -1.7
TRIM71Q2Q1W2 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC4.44□□□□□ -1.7
TRIM71Q2Q1W2 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC4.44□□□□□ -1.7
TRIM71Q2Q1W2 AC136618.2-201ENST00000575091 400 ntBASIC4.44□□□□□ -1.7
TRIM71Q2Q1W2 MIR4644-201ENST00000579929 84 ntBASIC4.44□□□□□ -1.7
TRIM71Q2Q1W2 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC4.44□□□□□ -1.7
TRIM71Q2Q1W2 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.44□□□□□ -1.7
TRIM71Q2Q1W2 LLPHP1-201ENST00000603571 367 ntBASIC4.44□□□□□ -1.7
TRIM71Q2Q1W2 AC092354.1-201ENST00000606057 376 ntBASIC4.44□□□□□ -1.7
TRIM71Q2Q1W2 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.44□□□□□ -1.7
TRIM71Q2Q1W2 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC4.44□□□□□ -1.7
TRIM71Q2Q1W2 AC108747.1-201ENST00000609508 535 ntBASIC4.44□□□□□ -1.7
TRIM71Q2Q1W2 AC069200.1-201ENST00000609511 323 ntBASIC4.44□□□□□ -1.7
TRIM71Q2Q1W2 AC105429.2-201ENST00000610567 517 ntBASIC4.44□□□□□ -1.7
TRIM71Q2Q1W2 AC025594.3-201ENST00000613068 790 ntBASIC4.44□□□□□ -1.7
TRIM71Q2Q1W2 uc_338.32-201ENST00000615087 172 ntBASIC4.44□□□□□ -1.7
TRIM71Q2Q1W2 MIR7844-201ENST00000616161 122 ntBASIC4.44□□□□□ -1.7
TRIM71Q2Q1W2 U6.42-201ENST00000618440 107 ntBASIC4.44□□□□□ -1.7
TRIM71Q2Q1W2 AC244100.1-202ENST00000621554 382 ntBASIC4.44□□□□□ -1.7
TRIM71Q2Q1W2 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
TRIM71Q2Q1W2 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
TRIM71Q2Q1W2 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
TRIM71Q2Q1W2 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
TRIM71Q2Q1W2 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
TRIM71Q2Q1W2 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
TRIM71Q2Q1W2 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 118.8 ms