Protein–RNA interactions for Protein: Q13635

PTCH1, Protein patched homolog 1, humanhuman

Predictions only

Length 1,447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1Q13635 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC3.74□□□□□ -1.81
PTCH1Q13635 AC007687.1-201ENST00000602704 304 ntBASIC3.74□□□□□ -1.81
PTCH1Q13635 AC112503.2-201ENST00000609005 552 ntBASIC3.74□□□□□ -1.81
PTCH1Q13635 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC3.74□□□□□ -1.81
PTCH1Q13635 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC3.74□□□□□ -1.81
PTCH1Q13635 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
PTCH1Q13635 ZNF72P-201ENST00000425869 1908 ntBASIC3.74□□□□□ -1.81
PTCH1Q13635 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC3.74□□□□□ -1.81
PTCH1Q13635 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.73□□□□□ -1.81
PTCH1Q13635 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.73□□□□□ -1.81
PTCH1Q13635 RNU6-1243P-201ENST00000364028 107 ntBASIC3.73□□□□□ -1.81
PTCH1Q13635 RNU6-650P-201ENST00000365658 111 ntBASIC3.73□□□□□ -1.81
PTCH1Q13635 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC3.73□□□□□ -1.81
PTCH1Q13635 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
PTCH1Q13635 RNU6ATAC15P-201ENST00000408279 121 ntBASIC3.73□□□□□ -1.81
PTCH1Q13635 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC3.73□□□□□ -1.81
PTCH1Q13635 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC3.73□□□□□ -1.81
PTCH1Q13635 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC3.73□□□□□ -1.81
PTCH1Q13635 RPL21P41-201ENST00000459863 264 ntBASIC3.73□□□□□ -1.81
PTCH1Q13635 RN7SL330P-201ENST00000469709 307 ntBASIC3.73□□□□□ -1.81
PTCH1Q13635 AP004217.1-201ENST00000480579 346 ntBASIC3.73□□□□□ -1.81
PTCH1Q13635 SRIP1-201ENST00000489235 288 ntBASIC3.73□□□□□ -1.81
PTCH1Q13635 SRI-210ENST00000490437 570 ntTSL 2 BASIC3.73□□□□□ -1.81
PTCH1Q13635 AC078918.1-201ENST00000498515 228 ntBASIC3.73□□□□□ -1.81
PTCH1Q13635 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC3.73□□□□□ -1.81
PTCH1Q13635 TMEM248P1-201ENST00000510579 951 ntBASIC3.73□□□□□ -1.81
PTCH1Q13635 RNA5SP380-201ENST00000517190 98 ntBASIC3.73□□□□□ -1.81
PTCH1Q13635 AP003102.1-201ENST00000525638 661 ntBASIC3.73□□□□□ -1.81
PTCH1Q13635 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.73□□□□□ -1.81
PTCH1Q13635 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC3.73□□□□□ -1.81
PTCH1Q13635 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC3.73□□□□□ -1.81
PTCH1Q13635 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC3.73□□□□□ -1.81
PTCH1Q13635 MIR4648-201ENST00000580107 72 ntBASIC3.73□□□□□ -1.81
PTCH1Q13635 DNAJC19P3-201ENST00000594491 331 ntBASIC3.73□□□□□ -1.81
PTCH1Q13635 AC078899.3-201ENST00000599065 212 ntBASIC3.73□□□□□ -1.81
PTCH1Q13635 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC3.73□□□□□ -1.81
PTCH1Q13635 AC007621.1-201ENST00000604544 437 ntBASIC3.73□□□□□ -1.81
PTCH1Q13635 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
PTCH1Q13635 RMST_10.1-201ENST00000616309 154 ntBASIC3.73□□□□□ -1.81
PTCH1Q13635 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
PTCH1Q13635 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.72□□□□□ -1.81
PTCH1Q13635 AL157700.1-201ENST00000561973 1432 ntBASIC3.72□□□□□ -1.81
PTCH1Q13635 RNU6-796P-201ENST00000391086 107 ntBASIC3.72□□□□□ -1.81
PTCH1Q13635 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
PTCH1Q13635 MIR1289-2-201ENST00000408360 111 ntBASIC3.72□□□□□ -1.81
PTCH1Q13635 RNA5SP425-201ENST00000410336 112 ntBASIC3.72□□□□□ -1.81
PTCH1Q13635 FAM204CP-201ENST00000424489 642 ntBASIC3.72□□□□□ -1.81
PTCH1Q13635 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC3.72□□□□□ -1.81
PTCH1Q13635 YWHAZP8-201ENST00000436935 731 ntBASIC3.72□□□□□ -1.81
PTCH1Q13635 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.72□□□□□ -1.81
PTCH1Q13635 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC3.72□□□□□ -1.81
PTCH1Q13635 RNU6-488P-201ENST00000515918 99 ntBASIC3.72□□□□□ -1.81
PTCH1Q13635 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC3.72□□□□□ -1.81
PTCH1Q13635 AC019227.1-201ENST00000526902 510 ntBASIC3.72□□□□□ -1.81
PTCH1Q13635 HPRT1P3-201ENST00000539521 576 ntBASIC3.72□□□□□ -1.81
PTCH1Q13635 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.72□□□□□ -1.81
PTCH1Q13635 MTCYBP28-201ENST00000566728 1132 ntBASIC3.72□□□□□ -1.81
PTCH1Q13635 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC3.72□□□□□ -1.81
PTCH1Q13635 ZNF861P-201ENST00000588126 639 ntBASIC3.72□□□□□ -1.81
PTCH1Q13635 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.72□□□□□ -1.81
PTCH1Q13635 AL450489.1-201ENST00000612071 468 ntBASIC3.72□□□□□ -1.81
PTCH1Q13635 AL163051.2-201ENST00000618976 735 ntBASIC3.72□□□□□ -1.81
PTCH1Q13635 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC3.72□□□□□ -1.81
PTCH1Q13635 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC3.72□□□□□ -1.81
PTCH1Q13635 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
PTCH1Q13635 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
PTCH1Q13635 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.72□□□□□ -1.81
PTCH1Q13635 EXOC5P1-201ENST00000510543 1969 ntBASIC3.72□□□□□ -1.81
PTCH1Q13635 SEPT7P7-201ENST00000420492 1301 ntBASIC3.72□□□□□ -1.81
PTCH1Q13635 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.72□□□□□ -1.81
PTCH1Q13635 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
PTCH1Q13635 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
PTCH1Q13635 MTND5P19-201ENST00000424872 1794 ntBASIC3.71□□□□□ -1.81
PTCH1Q13635 SNORA31-201ENST00000362607 130 ntBASIC3.71□□□□□ -1.82
PTCH1Q13635 SNORA36C-201ENST00000384289 132 ntBASIC3.71□□□□□ -1.82
PTCH1Q13635 AC073264.1-201ENST00000411508 416 ntBASIC3.71□□□□□ -1.82
PTCH1Q13635 Z98742.3-201ENST00000418637 326 ntBASIC3.71□□□□□ -1.82
PTCH1Q13635 PTP4A1P5-201ENST00000420305 455 ntBASIC3.71□□□□□ -1.82
PTCH1Q13635 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC3.71□□□□□ -1.82
PTCH1Q13635 RPS29P6-201ENST00000438196 145 ntBASIC3.71□□□□□ -1.82
PTCH1Q13635 AC092170.1-201ENST00000440211 356 ntBASIC3.71□□□□□ -1.82
PTCH1Q13635 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC3.71□□□□□ -1.82
PTCH1Q13635 RPS26P56-201ENST00000444468 240 ntBASIC3.71□□□□□ -1.82
PTCH1Q13635 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.71□□□□□ -1.82
PTCH1Q13635 AP000893.1-201ENST00000474462 794 ntBASIC3.71□□□□□ -1.82
PTCH1Q13635 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC3.71□□□□□ -1.82
PTCH1Q13635 AF279873.1-201ENST00000523393 313 ntBASIC3.71□□□□□ -1.82
PTCH1Q13635 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.71□□□□□ -1.82
PTCH1Q13635 AC095057.3-201ENST00000567102 1157 ntBASIC3.71□□□□□ -1.82
PTCH1Q13635 AC090616.5-202ENST00000582111 297 ntBASIC3.71□□□□□ -1.82
PTCH1Q13635 AC008687.2-201ENST00000597865 520 ntBASIC3.71□□□□□ -1.82
PTCH1Q13635 AC008277.2-201ENST00000605196 797 ntBASIC3.71□□□□□ -1.82
PTCH1Q13635 AC090115.4-201ENST00000609970 188 ntBASIC3.71□□□□□ -1.82
PTCH1Q13635 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC3.71□□□□□ -1.82
PTCH1Q13635 GABPAP-201ENST00000419271 1356 ntBASIC3.71□□□□□ -1.82
PTCH1Q13635 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
PTCH1Q13635 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
PTCH1Q13635 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
PTCH1Q13635 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.7□□□□□ -1.82
PTCH1Q13635 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms