Protein–RNA interactions for Protein: P33241

LSP1, Lymphocyte-specific protein 1, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P33241 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.67□□□□□ -1.66
LSP1P33241 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC4.67□□□□□ -1.66
LSP1P33241 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.67□□□□□ -1.66
LSP1P33241 MTCO1P9-201ENST00000505577 1534 ntBASIC4.67□□□□□ -1.66
LSP1P33241 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
LSP1P33241 CASC19-280ENST00000642102 1351 ntBASIC4.66□□□□□ -1.66
LSP1P33241 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
LSP1P33241 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC4.66□□□□□ -1.66
LSP1P33241 AL139811.1-201ENST00000424779 2299 ntBASIC4.66□□□□□ -1.66
LSP1P33241 DHX40P1-201ENST00000588725 1412 ntBASIC4.66□□□□□ -1.66
LSP1P33241 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
LSP1P33241 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
LSP1P33241 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.66□□□□□ -1.66
LSP1P33241 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
LSP1P33241 Y_RNA.38-201ENST00000362617 102 ntBASIC4.66□□□□□ -1.66
LSP1P33241 SNORA51.1-201ENST00000363243 140 ntBASIC4.66□□□□□ -1.66
LSP1P33241 RNU5E-8P-201ENST00000363502 116 ntBASIC4.66□□□□□ -1.66
LSP1P33241 RNA5SP513-201ENST00000364648 118 ntBASIC4.66□□□□□ -1.66
LSP1P33241 RNU6-356P-201ENST00000384140 107 ntBASIC4.66□□□□□ -1.66
LSP1P33241 MIR1-2-201ENST00000384961 85 ntBASIC4.66□□□□□ -1.66
LSP1P33241 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
LSP1P33241 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
LSP1P33241 HSPD1P16-201ENST00000402302 394 ntBASIC4.66□□□□□ -1.66
LSP1P33241 RAP1BP3-201ENST00000407180 549 ntBASIC4.66□□□□□ -1.66
LSP1P33241 IL6-206ENST00000407492 926 ntTSL 3 BASIC4.66□□□□□ -1.66
LSP1P33241 RPS3AP24-201ENST00000407896 734 ntBASIC4.66□□□□□ -1.66
LSP1P33241 RNU6-516P-201ENST00000411381 104 ntBASIC4.66□□□□□ -1.66
LSP1P33241 AC138393.2-201ENST00000414742 246 ntBASIC4.66□□□□□ -1.66
LSP1P33241 MRPL50P2-201ENST00000416821 482 ntBASIC4.66□□□□□ -1.66
LSP1P33241 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC4.66□□□□□ -1.66
LSP1P33241 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC4.66□□□□□ -1.66
LSP1P33241 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC4.66□□□□□ -1.66
LSP1P33241 RPL7L1P9-201ENST00000431298 745 ntBASIC4.66□□□□□ -1.66
LSP1P33241 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC4.66□□□□□ -1.66
LSP1P33241 MRPS18BP2-201ENST00000434310 759 ntBASIC4.66□□□□□ -1.66
LSP1P33241 BNIP3P2-201ENST00000441221 577 ntBASIC4.66□□□□□ -1.66
LSP1P33241 AC140076.1-201ENST00000449897 361 ntBASIC4.66□□□□□ -1.66
LSP1P33241 FDX1P2-201ENST00000450769 375 ntBASIC4.66□□□□□ -1.66
LSP1P33241 RNU7-59P-201ENST00000459101 61 ntBASIC4.66□□□□□ -1.66
LSP1P33241 SCARNA10-201ENST00000459255 330 ntBASIC4.66□□□□□ -1.66
LSP1P33241 AC079804.1-201ENST00000461922 436 ntBASIC4.66□□□□□ -1.66
LSP1P33241 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC4.66□□□□□ -1.66
LSP1P33241 RPL36AP51-201ENST00000487216 318 ntBASIC4.66□□□□□ -1.66
LSP1P33241 AC139783.2-201ENST00000504847 1145 ntBASIC4.66□□□□□ -1.66
LSP1P33241 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC4.66□□□□□ -1.66
LSP1P33241 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC4.66□□□□□ -1.66
LSP1P33241 RNU6-358P-201ENST00000516564 75 ntBASIC4.66□□□□□ -1.66
LSP1P33241 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC4.66□□□□□ -1.66
LSP1P33241 RGS5-219ENST00000528019 512 ntTSL 4 BASIC4.66□□□□□ -1.66
LSP1P33241 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC4.66□□□□□ -1.66
LSP1P33241 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC4.66□□□□□ -1.66
LSP1P33241 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC4.66□□□□□ -1.66
LSP1P33241 AC034105.3-201ENST00000565294 442 ntBASIC4.66□□□□□ -1.66
LSP1P33241 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC4.66□□□□□ -1.66
LSP1P33241 RN7SL753P-201ENST00000581238 290 ntBASIC4.66□□□□□ -1.66
LSP1P33241 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC4.66□□□□□ -1.66
LSP1P33241 AL162413.1-201ENST00000603198 110 ntBASIC4.66□□□□□ -1.66
LSP1P33241 SUMO2P15-201ENST00000604285 278 ntBASIC4.66□□□□□ -1.66
LSP1P33241 AC115621.1-201ENST00000604653 858 ntBASIC4.66□□□□□ -1.66
LSP1P33241 AC010201.1-201ENST00000605051 540 ntBASIC4.66□□□□□ -1.66
LSP1P33241 BX323046.1-201ENST00000610145 535 ntBASIC4.66□□□□□ -1.66
LSP1P33241 AC012409.3-201ENST00000611343 981 ntBASIC4.66□□□□□ -1.66
LSP1P33241 AC109309.2-201ENST00000612597 332 ntBASIC4.66□□□□□ -1.66
LSP1P33241 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.66□□□□□ -1.66
LSP1P33241 MIR6729-201ENST00000618194 65 ntBASIC4.66□□□□□ -1.66
LSP1P33241 RMST_9.1-201ENST00000619945 193 ntBASIC4.66□□□□□ -1.66
LSP1P33241 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.66□□□□□ -1.66
LSP1P33241 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC4.66□□□□□ -1.66
LSP1P33241 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
LSP1P33241 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
LSP1P33241 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
LSP1P33241 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC4.66□□□□□ -1.66
LSP1P33241 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
LSP1P33241 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.66□□□□□ -1.66
LSP1P33241 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
LSP1P33241 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
LSP1P33241 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC4.65□□□□□ -1.66
LSP1P33241 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
LSP1P33241 MAPK10-263ENST00000641052 4307 ntBASIC4.65□□□□□ -1.66
LSP1P33241 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
LSP1P33241 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.65□□□□□ -1.66
LSP1P33241 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
LSP1P33241 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
LSP1P33241 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC4.65□□□□□ -1.67
LSP1P33241 RNU1-15P-201ENST00000353977 144 ntBASIC4.65□□□□□ -1.67
LSP1P33241 SNORD56.2-201ENST00000363242 71 ntBASIC4.65□□□□□ -1.67
LSP1P33241 RN7SKP162-201ENST00000363605 345 ntBASIC4.65□□□□□ -1.67
LSP1P33241 RNA5SP428-201ENST00000365129 132 ntBASIC4.65□□□□□ -1.67
LSP1P33241 AL391361.1-201ENST00000405580 489 ntBASIC4.65□□□□□ -1.67
LSP1P33241 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
LSP1P33241 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC4.65□□□□□ -1.67
LSP1P33241 ZNF90P2-204ENST00000419323 1075 ntBASIC4.65□□□□□ -1.67
LSP1P33241 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC4.65□□□□□ -1.67
LSP1P33241 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC4.65□□□□□ -1.67
LSP1P33241 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC4.65□□□□□ -1.67
LSP1P33241 USP9YP9-201ENST00000429406 715 ntBASIC4.65□□□□□ -1.67
LSP1P33241 CFL1P1-202ENST00000432948 411 ntBASIC4.65□□□□□ -1.67
LSP1P33241 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC4.65□□□□□ -1.67
LSP1P33241 AL606489.2-201ENST00000433886 234 ntBASIC4.65□□□□□ -1.67
LSP1P33241 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.65□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms