Protein–RNA interactions for Protein: P31415

CASQ1, Calsequestrin-1, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ1P31415 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
CASQ1P31415 TAF9BP2-201ENST00000400856 499 ntBASIC3.07□□□□□ -1.92
CASQ1P31415 RNU6-193P-201ENST00000410977 107 ntBASIC3.07□□□□□ -1.92
CASQ1P31415 AL807761.1-201ENST00000417622 171 ntBASIC3.07□□□□□ -1.92
CASQ1P31415 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC3.07□□□□□ -1.92
CASQ1P31415 AC097713.2-201ENST00000430199 356 ntBASIC3.07□□□□□ -1.92
CASQ1P31415 AC004866.2-201ENST00000438285 481 ntBASIC3.07□□□□□ -1.92
CASQ1P31415 MRPL50P4-201ENST00000446432 475 ntBASIC3.07□□□□□ -1.92
CASQ1P31415 AL589880.1-201ENST00000448271 287 ntBASIC3.07□□□□□ -1.92
CASQ1P31415 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
CASQ1P31415 AC109925.1-201ENST00000478069 331 ntBASIC3.07□□□□□ -1.92
CASQ1P31415 VPS26AP1-201ENST00000483197 979 ntBASIC3.07□□□□□ -1.92
CASQ1P31415 AC104108.1-201ENST00000509930 412 ntBASIC3.07□□□□□ -1.92
CASQ1P31415 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC3.07□□□□□ -1.92
CASQ1P31415 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC3.07□□□□□ -1.92
CASQ1P31415 AC011611.1-201ENST00000552179 197 ntBASIC3.07□□□□□ -1.92
CASQ1P31415 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC3.07□□□□□ -1.92
CASQ1P31415 MIR4446-201ENST00000578505 67 ntBASIC3.07□□□□□ -1.92
CASQ1P31415 AC015871.2-201ENST00000603605 948 ntBASIC3.07□□□□□ -1.92
CASQ1P31415 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC3.07□□□□□ -1.92
CASQ1P31415 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.07□□□□□ -1.92
CASQ1P31415 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.07□□□□□ -1.92
CASQ1P31415 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
CASQ1P31415 RNU6-921P-201ENST00000384361 107 ntBASIC3.06□□□□□ -1.92
CASQ1P31415 MIR490-201ENST00000384865 128 ntBASIC3.06□□□□□ -1.92
CASQ1P31415 RNA5SP354-201ENST00000391247 136 ntBASIC3.06□□□□□ -1.92
CASQ1P31415 AL512633.1-201ENST00000399931 655 ntBASIC3.06□□□□□ -1.92
CASQ1P31415 AL136372.1-201ENST00000403060 228 ntBASIC3.06□□□□□ -1.92
CASQ1P31415 TANK-205ENST00000405852 2155 ntTSL 5 BASIC3.06□□□□□ -1.92
CASQ1P31415 RPS29P4-201ENST00000414733 161 ntBASIC3.06□□□□□ -1.92
CASQ1P31415 RPF2P1-201ENST00000424137 906 ntBASIC3.06□□□□□ -1.92
CASQ1P31415 RPL27AP8-201ENST00000424277 446 ntBASIC3.06□□□□□ -1.92
CASQ1P31415 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC3.06□□□□□ -1.92
CASQ1P31415 AC129850.1-201ENST00000436203 508 ntBASIC3.06□□□□□ -1.92
CASQ1P31415 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.06□□□□□ -1.92
CASQ1P31415 AC117440.1-201ENST00000474107 571 ntBASIC3.06□□□□□ -1.92
CASQ1P31415 KC877373.1-201ENST00000479066 408 ntBASIC3.06□□□□□ -1.92
CASQ1P31415 AC017007.3-201ENST00000479865 435 ntBASIC3.06□□□□□ -1.92
CASQ1P31415 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC3.06□□□□□ -1.92
CASQ1P31415 SNORA70.16-201ENST00000516390 95 ntBASIC3.06□□□□□ -1.92
CASQ1P31415 RN7SKP272-201ENST00000516988 232 ntBASIC3.06□□□□□ -1.92
CASQ1P31415 OR8I1P-201ENST00000529291 931 ntBASIC3.06□□□□□ -1.92
CASQ1P31415 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
CASQ1P31415 AP002826.1-201ENST00000608835 315 ntBASIC3.06□□□□□ -1.92
CASQ1P31415 AC027309.3-201ENST00000623419 351 ntBASIC3.06□□□□□ -1.92
CASQ1P31415 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC3.06□□□□□ -1.92
CASQ1P31415 AC010680.1-201ENST00000590024 3590 ntBASIC3.06□□□□□ -1.92
CASQ1P31415 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
CASQ1P31415 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC3.05□□□□□ -1.92
CASQ1P31415 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
CASQ1P31415 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC3.05□□□□□ -1.92
CASQ1P31415 AC234772.1-201ENST00000377927 937 ntBASIC3.05□□□□□ -1.92
CASQ1P31415 SNORA56-201ENST00000383966 129 ntBASIC3.05□□□□□ -1.92
CASQ1P31415 MIR592-201ENST00000384959 97 ntBASIC3.05□□□□□ -1.92
CASQ1P31415 TAF9BP1-201ENST00000396646 746 ntBASIC3.05□□□□□ -1.92
CASQ1P31415 UQCRFS1P3-201ENST00000407697 385 ntBASIC3.05□□□□□ -1.92
CASQ1P31415 HMGB3P31-201ENST00000413333 595 ntBASIC3.05□□□□□ -1.92
CASQ1P31415 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC3.05□□□□□ -1.92
CASQ1P31415 RPP40P1-201ENST00000426762 456 ntBASIC3.05□□□□□ -1.92
CASQ1P31415 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC3.05□□□□□ -1.92
CASQ1P31415 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC3.05□□□□□ -1.92
CASQ1P31415 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC3.05□□□□□ -1.92
CASQ1P31415 BX248409.1-201ENST00000455497 255 ntBASIC3.05□□□□□ -1.92
CASQ1P31415 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.05□□□□□ -1.92
CASQ1P31415 RPL37P25-201ENST00000507308 276 ntBASIC3.05□□□□□ -1.92
CASQ1P31415 MTND4LP31-201ENST00000514859 294 ntBASIC3.05□□□□□ -1.92
CASQ1P31415 RNA5SP471-201ENST00000516971 106 ntBASIC3.05□□□□□ -1.92
CASQ1P31415 OR4P1P-201ENST00000530808 1136 ntBASIC3.05□□□□□ -1.92
CASQ1P31415 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.05□□□□□ -1.92
CASQ1P31415 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC3.05□□□□□ -1.92
CASQ1P31415 HPRT1P3-201ENST00000539521 576 ntBASIC3.05□□□□□ -1.92
CASQ1P31415 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC3.05□□□□□ -1.92
CASQ1P31415 LSM6P2-201ENST00000552208 177 ntBASIC3.05□□□□□ -1.92
CASQ1P31415 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.05□□□□□ -1.92
CASQ1P31415 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC3.05□□□□□ -1.92
CASQ1P31415 AC011260.1-201ENST00000578420 472 ntBASIC3.05□□□□□ -1.92
CASQ1P31415 MIR3605-201ENST00000583214 100 ntBASIC3.05□□□□□ -1.92
CASQ1P31415 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC3.05□□□□□ -1.92
CASQ1P31415 AF230666.2-201ENST00000602328 725 ntBASIC3.05□□□□□ -1.92
CASQ1P31415 ZNF663P-202ENST00000641770 1131 ntBASIC3.05□□□□□ -1.92
CASQ1P31415 AC130650.2-201ENST00000618736 2403 ntBASIC3.05□□□□□ -1.92
CASQ1P31415 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.05□□□□□ -1.92
CASQ1P31415 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
CASQ1P31415 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC3.05□□□□□ -1.92
CASQ1P31415 AC093536.2-201ENST00000565257 1406 ntBASIC3.04□□□□□ -1.92
CASQ1P31415 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC3.04□□□□□ -1.92
CASQ1P31415 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC3.04□□□□□ -1.92
CASQ1P31415 RNU1-33P-201ENST00000364249 162 ntBASIC3.04□□□□□ -1.92
CASQ1P31415 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
CASQ1P31415 RNU1-138P-201ENST00000384093 164 ntBASIC3.04□□□□□ -1.92
CASQ1P31415 TAS2R15P-201ENST00000390674 928 ntBASIC3.04□□□□□ -1.92
CASQ1P31415 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
CASQ1P31415 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.04□□□□□ -1.92
CASQ1P31415 AC004975.1-201ENST00000428733 208 ntBASIC3.04□□□□□ -1.92
CASQ1P31415 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC3.04□□□□□ -1.92
CASQ1P31415 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC3.04□□□□□ -1.92
CASQ1P31415 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC3.04□□□□□ -1.92
CASQ1P31415 RPL27AP5-201ENST00000469428 449 ntBASIC3.04□□□□□ -1.92
CASQ1P31415 AC003982.1-202ENST00000469928 248 ntBASIC3.04□□□□□ -1.92
CASQ1P31415 RN7SL293P-201ENST00000481765 281 ntBASIC3.04□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms