Protein–RNA interactions for Protein: P13747

HLA-E, HLA class I histocompatibility antigen, alpha chain E, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-EP13747 AC115085.1-201ENST00000588924 229 ntBASIC2.56□□□□□ -2
HLA-EP13747 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC2.56□□□□□ -2
HLA-EP13747 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC2.56□□□□□ -2
HLA-EP13747 U4.3-201ENST00000621047 82 ntBASIC2.56□□□□□ -2
HLA-EP13747 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.56□□□□□ -2
HLA-EP13747 CNOT6LP1-201ENST00000559681 1462 ntBASIC2.56□□□□□ -2
HLA-EP13747 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC2.56□□□□□ -2
HLA-EP13747 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC2.56□□□□□ -2
HLA-EP13747 RNU6-244P-201ENST00000391028 104 ntBASIC2.55□□□□□ -2
HLA-EP13747 RNU1-101P-201ENST00000391171 127 ntBASIC2.55□□□□□ -2
HLA-EP13747 RNU4-53P-201ENST00000410828 140 ntBASIC2.55□□□□□ -2
HLA-EP13747 RNA5SP498-201ENST00000411342 120 ntBASIC2.55□□□□□ -2
HLA-EP13747 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.55□□□□□ -2
HLA-EP13747 Z98742.3-201ENST00000418637 326 ntBASIC2.55□□□□□ -2
HLA-EP13747 RPL23AP74-201ENST00000437246 471 ntBASIC2.55□□□□□ -2
HLA-EP13747 ARL5AP2-201ENST00000444698 533 ntBASIC2.55□□□□□ -2
HLA-EP13747 AC008280.2-201ENST00000455473 307 ntBASIC2.55□□□□□ -2
HLA-EP13747 VN1R17P-201ENST00000472048 1090 ntBASIC2.55□□□□□ -2
HLA-EP13747 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.55□□□□□ -2
HLA-EP13747 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC2.55□□□□□ -2
HLA-EP13747 AC108210.2-201ENST00000503681 201 ntBASIC2.55□□□□□ -2
HLA-EP13747 AC090071.1-201ENST00000507713 644 ntBASIC2.55□□□□□ -2
HLA-EP13747 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC2.55□□□□□ -2
HLA-EP13747 RN7SKP244-201ENST00000516513 307 ntBASIC2.55□□□□□ -2
HLA-EP13747 AF279873.1-201ENST00000523393 313 ntBASIC2.55□□□□□ -2
HLA-EP13747 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC2.55□□□□□ -2
HLA-EP13747 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC2.55□□□□□ -2
HLA-EP13747 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC2.55□□□□□ -2
HLA-EP13747 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC2.55□□□□□ -2
HLA-EP13747 CKS1BP1-201ENST00000555221 240 ntBASIC2.55□□□□□ -2
HLA-EP13747 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC2.55□□□□□ -2
HLA-EP13747 AC009159.1-201ENST00000618386 642 ntBASIC2.55□□□□□ -2
HLA-EP13747 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC2.55□□□□□ -2
HLA-EP13747 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.55□□□□□ -2
HLA-EP13747 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
HLA-EP13747 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC2.54□□□□□ -2
HLA-EP13747 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.54□□□□□ -2
HLA-EP13747 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC2.54□□□□□ -2
HLA-EP13747 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.54□□□□□ -2
HLA-EP13747 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
HLA-EP13747 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
HLA-EP13747 AC092638.1-201ENST00000411966 1275 ntBASIC2.54□□□□□ -2
HLA-EP13747 HMGN2P35-201ENST00000412164 270 ntBASIC2.54□□□□□ -2
HLA-EP13747 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.54□□□□□ -2
HLA-EP13747 AC073310.1-201ENST00000423226 1033 ntBASIC2.54□□□□□ -2
HLA-EP13747 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.54□□□□□ -2
HLA-EP13747 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC2.54□□□□□ -2
HLA-EP13747 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC2.54□□□□□ -2
HLA-EP13747 IFNA11P-201ENST00000446352 526 ntBASIC2.54□□□□□ -2
HLA-EP13747 ST13P20-201ENST00000447996 1065 ntBASIC2.54□□□□□ -2
HLA-EP13747 AL353705.4-201ENST00000449661 238 ntBASIC2.54□□□□□ -2
HLA-EP13747 SSXP4-201ENST00000451349 245 ntBASIC2.54□□□□□ -2
HLA-EP13747 OR7L1P-201ENST00000456181 380 ntBASIC2.54□□□□□ -2
HLA-EP13747 AC146507.1-201ENST00000468335 354 ntBASIC2.54□□□□□ -2
HLA-EP13747 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC2.54□□□□□ -2
HLA-EP13747 KLHL2P1-201ENST00000508691 521 ntBASIC2.54□□□□□ -2
HLA-EP13747 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC2.54□□□□□ -2
HLA-EP13747 RNU4-60P-201ENST00000517239 135 ntBASIC2.54□□□□□ -2
HLA-EP13747 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC2.54□□□□□ -2
HLA-EP13747 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC2.54□□□□□ -2
HLA-EP13747 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.54□□□□□ -2
HLA-EP13747 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC2.54□□□□□ -2
HLA-EP13747 ATP5F1P5-201ENST00000526403 760 ntBASIC2.54□□□□□ -2
HLA-EP13747 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC2.54□□□□□ -2
HLA-EP13747 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.54□□□□□ -2
HLA-EP13747 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC2.54□□□□□ -2
HLA-EP13747 MIR3690-201ENST00000580266 75 ntBASIC2.54□□□□□ -2
HLA-EP13747 AC022069.1-201ENST00000582910 658 ntBASIC2.54□□□□□ -2
HLA-EP13747 FAM60CP-201ENST00000591086 664 ntBASIC2.54□□□□□ -2
HLA-EP13747 AL356575.1-201ENST00000603008 283 ntBASIC2.54□□□□□ -2
HLA-EP13747 AC006023.2-201ENST00000609916 167 ntBASIC2.54□□□□□ -2
HLA-EP13747 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.54□□□□□ -2
HLA-EP13747 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.54□□□□□ -2
HLA-EP13747 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.54□□□□□ -2
HLA-EP13747 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.53□□□□□ -2
HLA-EP13747 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.53□□□□□ -2
HLA-EP13747 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC2.53□□□□□ -2
HLA-EP13747 AL359715.4-201ENST00000606629 1436 ntBASIC2.53□□□□□ -2
HLA-EP13747 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC2.53□□□□□ -2
HLA-EP13747 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC2.53□□□□□ -2
HLA-EP13747 SNORA25.6-201ENST00000364121 118 ntBASIC2.53□□□□□ -2
HLA-EP13747 SNORA7.2-201ENST00000364446 145 ntBASIC2.53□□□□□ -2
HLA-EP13747 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.53□□□□□ -2
HLA-EP13747 RNU6-482P-201ENST00000391068 107 ntBASIC2.53□□□□□ -2
HLA-EP13747 AC080125.1-201ENST00000414888 684 ntBASIC2.53□□□□□ -2
HLA-EP13747 EI24P1-201ENST00000416584 867 ntBASIC2.53□□□□□ -2
HLA-EP13747 HSPE1P1-201ENST00000421494 318 ntBASIC2.53□□□□□ -2
HLA-EP13747 AL513175.2-201ENST00000422071 443 ntBASIC2.53□□□□□ -2
HLA-EP13747 FCF1P1-201ENST00000432690 571 ntBASIC2.53□□□□□ -2
HLA-EP13747 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC2.53□□□□□ -2
HLA-EP13747 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2.53□□□□□ -2
HLA-EP13747 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.53□□□□□ -2
HLA-EP13747 RPS4XP6-201ENST00000477670 797 ntBASIC2.53□□□□□ -2
HLA-EP13747 RAD51AP1P1-201ENST00000484195 1001 ntBASIC2.53□□□□□ -2
HLA-EP13747 OR5H5P-201ENST00000503164 928 ntBASIC2.53□□□□□ -2
HLA-EP13747 SNORA31.15-201ENST00000516771 132 ntBASIC2.53□□□□□ -2
HLA-EP13747 RNU6-1308P-201ENST00000516817 103 ntBASIC2.53□□□□□ -2
HLA-EP13747 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC2.53□□□□□ -2
HLA-EP13747 OR6C73P-201ENST00000546432 358 ntBASIC2.53□□□□□ -2
HLA-EP13747 AC015712.3-201ENST00000559380 164 ntBASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms