Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 SNORD116-26-201ENST00000516006 96 ntBASIC4.1□□□□□ -1.75
MMP3P08254 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC4.1□□□□□ -1.75
MMP3P08254 AC087276.1-201ENST00000529659 480 ntBASIC4.1□□□□□ -1.75
MMP3P08254 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
MMP3P08254 OR6C7P-201ENST00000547875 934 ntBASIC4.1□□□□□ -1.75
MMP3P08254 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC4.1□□□□□ -1.75
MMP3P08254 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC4.1□□□□□ -1.75
MMP3P08254 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.1□□□□□ -1.75
MMP3P08254 MIR5195-201ENST00000583555 115 ntBASIC4.1□□□□□ -1.75
MMP3P08254 MIR548AB-201ENST00000584917 84 ntBASIC4.1□□□□□ -1.75
MMP3P08254 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC4.1□□□□□ -1.75
MMP3P08254 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC4.1□□□□□ -1.75
MMP3P08254 MIR6864-201ENST00000617935 70 ntBASIC4.1□□□□□ -1.75
MMP3P08254 AC018816.2-201ENST00000621460 353 ntBASIC4.1□□□□□ -1.75
MMP3P08254 U6.101-201ENST00000637707 76 ntBASIC4.1□□□□□ -1.75
MMP3P08254 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
MMP3P08254 OR11H5P-202ENST00000641612 1325 ntBASIC4.1□□□□□ -1.75
MMP3P08254 LINC02471-203ENST00000641941 4752 ntBASIC4.1□□□□□ -1.75
MMP3P08254 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
MMP3P08254 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC4.1□□□□□ -1.75
MMP3P08254 AL365440.1-201ENST00000436135 2167 ntBASIC4.1□□□□□ -1.75
MMP3P08254 KPNA2P2-201ENST00000419546 1489 ntBASIC4.1□□□□□ -1.75
MMP3P08254 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.1□□□□□ -1.75
MMP3P08254 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC4.1□□□□□ -1.75
MMP3P08254 AL031985.3-201ENST00000565390 2449 ntBASIC4.1□□□□□ -1.75
MMP3P08254 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
MMP3P08254 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.09□□□□□ -1.75
MMP3P08254 CD36-221ENST00000534394 1741 ntTSL 2 BASIC4.09□□□□□ -1.75
MMP3P08254 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
MMP3P08254 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC4.09□□□□□ -1.75
MMP3P08254 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
MMP3P08254 AC090337.1-201ENST00000579651 2074 ntBASIC4.09□□□□□ -1.75
MMP3P08254 AC097504.1-201ENST00000515103 2415 ntBASIC4.09□□□□□ -1.75
MMP3P08254 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
MMP3P08254 RNU5F-7P-201ENST00000363696 115 ntBASIC4.09□□□□□ -1.75
MMP3P08254 RNU6-1243P-201ENST00000364028 107 ntBASIC4.09□□□□□ -1.75
MMP3P08254 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC4.09□□□□□ -1.75
MMP3P08254 Y_RNA.559-201ENST00000384686 107 ntBASIC4.09□□□□□ -1.75
MMP3P08254 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC4.09□□□□□ -1.75
MMP3P08254 LAP3P1-201ENST00000403648 294 ntBASIC4.09□□□□□ -1.75
MMP3P08254 MTCYBP36-201ENST00000404146 440 ntBASIC4.09□□□□□ -1.75
MMP3P08254 AL603766.1-201ENST00000407763 664 ntBASIC4.09□□□□□ -1.75
MMP3P08254 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC4.09□□□□□ -1.75
MMP3P08254 RPS3AP9-201ENST00000417027 792 ntBASIC4.09□□□□□ -1.75
MMP3P08254 Z99497.1-201ENST00000421282 135 ntBASIC4.09□□□□□ -1.75
MMP3P08254 MTCO2P34-201ENST00000421994 607 ntBASIC4.09□□□□□ -1.75
MMP3P08254 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.09□□□□□ -1.75
MMP3P08254 UBE2FP3-201ENST00000436366 524 ntBASIC4.09□□□□□ -1.75
MMP3P08254 RPL23AP16-201ENST00000441715 421 ntBASIC4.09□□□□□ -1.75
MMP3P08254 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC4.09□□□□□ -1.75
MMP3P08254 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC4.09□□□□□ -1.75
MMP3P08254 AL121877.1-201ENST00000453704 622 ntBASIC4.09□□□□□ -1.75
MMP3P08254 USP9YP10-201ENST00000454868 628 ntBASIC4.09□□□□□ -1.75
MMP3P08254 SNRPGP9-201ENST00000456025 225 ntBASIC4.09□□□□□ -1.75
MMP3P08254 AP000893.1-201ENST00000474462 794 ntBASIC4.09□□□□□ -1.75
MMP3P08254 USP9YP5-201ENST00000511770 630 ntBASIC4.09□□□□□ -1.75
MMP3P08254 SNORA70.18-201ENST00000516696 98 ntBASIC4.09□□□□□ -1.75
MMP3P08254 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.09□□□□□ -1.75
MMP3P08254 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC4.09□□□□□ -1.75
MMP3P08254 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC4.09□□□□□ -1.75
MMP3P08254 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC4.09□□□□□ -1.75
MMP3P08254 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC4.09□□□□□ -1.75
MMP3P08254 AC141257.3-201ENST00000572906 215 ntBASIC4.09□□□□□ -1.75
MMP3P08254 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC4.09□□□□□ -1.75
MMP3P08254 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC4.09□□□□□ -1.75
MMP3P08254 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC4.09□□□□□ -1.75
MMP3P08254 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.09□□□□□ -1.75
MMP3P08254 AC078899.5-201ENST00000612475 178 ntBASIC4.09□□□□□ -1.75
MMP3P08254 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC4.09□□□□□ -1.75
MMP3P08254 DDX43P2-201ENST00000604753 1354 ntBASIC4.09□□□□□ -1.75
MMP3P08254 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
MMP3P08254 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.09□□□□□ -1.76
MMP3P08254 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
MMP3P08254 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC4.09□□□□□ -1.76
MMP3P08254 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.09□□□□□ -1.76
MMP3P08254 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.09□□□□□ -1.76
MMP3P08254 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.09□□□□□ -1.76
MMP3P08254 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
MMP3P08254 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
MMP3P08254 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
MMP3P08254 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
MMP3P08254 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
MMP3P08254 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
MMP3P08254 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
MMP3P08254 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
MMP3P08254 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
MMP3P08254 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
MMP3P08254 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
MMP3P08254 RNA5SP52-201ENST00000362448 134 ntBASIC4.08□□□□□ -1.76
MMP3P08254 RNU6-623P-201ENST00000363143 105 ntBASIC4.08□□□□□ -1.76
MMP3P08254 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
MMP3P08254 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
MMP3P08254 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
MMP3P08254 MIR513A2-201ENST00000385249 127 ntBASIC4.08□□□□□ -1.76
MMP3P08254 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
MMP3P08254 AC004987.3-201ENST00000413879 771 ntBASIC4.08□□□□□ -1.76
MMP3P08254 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC4.08□□□□□ -1.76
MMP3P08254 EIF4EP1-201ENST00000422311 642 ntBASIC4.08□□□□□ -1.76
MMP3P08254 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
MMP3P08254 AC097713.2-201ENST00000430199 356 ntBASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 150.3 ms