Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC5.6□□□□□ -1.51
RAPGEF3O95398 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC5.6□□□□□ -1.51
RAPGEF3O95398 AP003465.2-201ENST00000602571 373 ntBASIC5.6□□□□□ -1.51
RAPGEF3O95398 AC068722.2-201ENST00000618734 544 ntBASIC5.6□□□□□ -1.51
RAPGEF3O95398 AC099842.1-201ENST00000619919 596 ntBASIC5.6□□□□□ -1.51
RAPGEF3O95398 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
RAPGEF3O95398 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
RAPGEF3O95398 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
RAPGEF3O95398 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
RAPGEF3O95398 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
RAPGEF3O95398 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
RAPGEF3O95398 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC5.59□□□□□ -1.51
RAPGEF3O95398 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
RAPGEF3O95398 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
RAPGEF3O95398 Y_RNA.359-201ENST00000365498 102 ntBASIC5.59□□□□□ -1.51
RAPGEF3O95398 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
RAPGEF3O95398 RPS24P12-201ENST00000402084 394 ntBASIC5.59□□□□□ -1.51
RAPGEF3O95398 RN7SKP56-201ENST00000410513 331 ntBASIC5.59□□□□□ -1.51
RAPGEF3O95398 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC5.59□□□□□ -1.51
RAPGEF3O95398 RPL21P32-201ENST00000419877 477 ntBASIC5.59□□□□□ -1.51
RAPGEF3O95398 MTND1P28-201ENST00000435623 950 ntBASIC5.59□□□□□ -1.51
RAPGEF3O95398 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC5.59□□□□□ -1.51
RAPGEF3O95398 RPS17P13-201ENST00000448974 407 ntBASIC5.59□□□□□ -1.51
RAPGEF3O95398 RPS15AP17-201ENST00000470598 390 ntBASIC5.59□□□□□ -1.51
RAPGEF3O95398 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC5.59□□□□□ -1.51
RAPGEF3O95398 RPS3AP14-201ENST00000483907 780 ntBASIC5.59□□□□□ -1.51
RAPGEF3O95398 RNA5SP208-201ENST00000516156 78 ntBASIC5.59□□□□□ -1.51
RAPGEF3O95398 RNU6-150P-201ENST00000516237 95 ntBASIC5.59□□□□□ -1.51
RAPGEF3O95398 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC5.59□□□□□ -1.51
RAPGEF3O95398 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC5.59□□□□□ -1.51
RAPGEF3O95398 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
RAPGEF3O95398 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC5.59□□□□□ -1.51
RAPGEF3O95398 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC5.59□□□□□ -1.51
RAPGEF3O95398 AC091489.2-201ENST00000566263 604 ntBASIC5.59□□□□□ -1.51
RAPGEF3O95398 AC073648.5-201ENST00000603502 305 ntBASIC5.59□□□□□ -1.51
RAPGEF3O95398 HSPE1P14-201ENST00000605812 302 ntBASIC5.59□□□□□ -1.51
RAPGEF3O95398 MIR6864-201ENST00000617935 70 ntBASIC5.59□□□□□ -1.51
RAPGEF3O95398 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.52
RAPGEF3O95398 MTND5P28-201ENST00000438005 1594 ntBASIC5.59□□□□□ -1.52
RAPGEF3O95398 AC097504.1-201ENST00000515103 2415 ntBASIC5.58□□□□□ -1.52
RAPGEF3O95398 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC5.58□□□□□ -1.52
RAPGEF3O95398 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
RAPGEF3O95398 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
RAPGEF3O95398 SNORA80A-201ENST00000363922 136 ntBASIC5.58□□□□□ -1.52
RAPGEF3O95398 AL023807.1-201ENST00000407932 359 ntBASIC5.58□□□□□ -1.52
RAPGEF3O95398 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC5.58□□□□□ -1.52
RAPGEF3O95398 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC5.58□□□□□ -1.52
RAPGEF3O95398 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC5.58□□□□□ -1.52
RAPGEF3O95398 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC5.58□□□□□ -1.52
RAPGEF3O95398 AC091862.1-201ENST00000438016 1100 ntBASIC5.58□□□□□ -1.52
RAPGEF3O95398 AL450263.2-201ENST00000439400 589 ntBASIC5.58□□□□□ -1.52
RAPGEF3O95398 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC5.58□□□□□ -1.52
RAPGEF3O95398 ARPC3P5-201ENST00000448802 534 ntBASIC5.58□□□□□ -1.52
RAPGEF3O95398 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC5.58□□□□□ -1.52
RAPGEF3O95398 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC5.58□□□□□ -1.52
RAPGEF3O95398 S100A11P2-201ENST00000467589 312 ntBASIC5.58□□□□□ -1.52
RAPGEF3O95398 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC5.58□□□□□ -1.52
RAPGEF3O95398 AP000797.1-201ENST00000478870 387 ntBASIC5.58□□□□□ -1.52
RAPGEF3O95398 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC5.58□□□□□ -1.52
RAPGEF3O95398 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC5.58□□□□□ -1.52
RAPGEF3O95398 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC5.58□□□□□ -1.52
RAPGEF3O95398 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC5.58□□□□□ -1.52
RAPGEF3O95398 OR4A45P-201ENST00000529954 901 ntBASIC5.58□□□□□ -1.52
RAPGEF3O95398 AC008127.2-201ENST00000549925 1075 ntBASIC5.58□□□□□ -1.52
RAPGEF3O95398 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC5.58□□□□□ -1.52
RAPGEF3O95398 AC006116.10-201ENST00000591836 581 ntBASIC5.58□□□□□ -1.52
RAPGEF3O95398 NDUFA8P1-201ENST00000605525 367 ntBASIC5.58□□□□□ -1.52
RAPGEF3O95398 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC5.58□□□□□ -1.52
RAPGEF3O95398 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC5.58□□□□□ -1.52
RAPGEF3O95398 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
RAPGEF3O95398 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
RAPGEF3O95398 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.58□□□□□ -1.52
RAPGEF3O95398 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC5.58□□□□□ -1.52
RAPGEF3O95398 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC5.58□□□□□ -1.52
RAPGEF3O95398 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC5.58□□□□□ -1.52
RAPGEF3O95398 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC5.57□□□□□ -1.52
RAPGEF3O95398 MTND4P16-201ENST00000466108 1367 ntBASIC5.57□□□□□ -1.52
RAPGEF3O95398 THAP12P5-201ENST00000405864 2275 ntBASIC5.57□□□□□ -1.52
RAPGEF3O95398 OR10J6P-201ENST00000289731 930 ntBASIC5.57□□□□□ -1.52
RAPGEF3O95398 RPL23AP57-201ENST00000332361 466 ntBASIC5.57□□□□□ -1.52
RAPGEF3O95398 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
RAPGEF3O95398 RNU6-1042P-201ENST00000384204 107 ntBASIC5.57□□□□□ -1.52
RAPGEF3O95398 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
RAPGEF3O95398 ELOCP17-201ENST00000414751 326 ntBASIC5.57□□□□□ -1.52
RAPGEF3O95398 RPL36P19-201ENST00000430744 301 ntBASIC5.57□□□□□ -1.52
RAPGEF3O95398 TRBV26-201ENST00000456572 344 ntBASIC5.57□□□□□ -1.52
RAPGEF3O95398 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC5.57□□□□□ -1.52
RAPGEF3O95398 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC5.57□□□□□ -1.52
RAPGEF3O95398 AC113430.1-201ENST00000506872 718 ntBASIC5.57□□□□□ -1.52
RAPGEF3O95398 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC5.57□□□□□ -1.52
RAPGEF3O95398 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC5.57□□□□□ -1.52
RAPGEF3O95398 APAF1-207ENST00000547743 651 ntTSL 3 BASIC5.57□□□□□ -1.52
RAPGEF3O95398 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC5.57□□□□□ -1.52
RAPGEF3O95398 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC5.57□□□□□ -1.52
RAPGEF3O95398 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC5.57□□□□□ -1.52
RAPGEF3O95398 AC141257.3-201ENST00000572906 215 ntBASIC5.57□□□□□ -1.52
RAPGEF3O95398 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC5.57□□□□□ -1.52
RAPGEF3O95398 AC005771.1-201ENST00000585581 349 ntBASIC5.57□□□□□ -1.52
RAPGEF3O95398 AP000403.1-201ENST00000603349 851 ntBASIC5.57□□□□□ -1.52
RAPGEF3O95398 AL033523.1-201ENST00000605153 153 ntBASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 113.6 ms