Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
RTN3O95197 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
RTN3O95197 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
RTN3O95197 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
RTN3O95197 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
RTN3O95197 AP000526.1-201ENST00000603308 1388 ntBASIC4.07□□□□□ -1.76
RTN3O95197 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
RTN3O95197 SNORD3H-201ENST00000384486 214 ntBASIC4.07□□□□□ -1.76
RTN3O95197 RNU6-253P-201ENST00000384730 105 ntBASIC4.07□□□□□ -1.76
RTN3O95197 MIR199A2-201ENST00000385289 110 ntBASIC4.07□□□□□ -1.76
RTN3O95197 ATP5F1P3-201ENST00000397213 657 ntBASIC4.07□□□□□ -1.76
RTN3O95197 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
RTN3O95197 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC4.07□□□□□ -1.76
RTN3O95197 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC4.07□□□□□ -1.76
RTN3O95197 ARF4P2-201ENST00000430209 526 ntBASIC4.07□□□□□ -1.76
RTN3O95197 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC4.07□□□□□ -1.76
RTN3O95197 VDAC1P3-201ENST00000434069 851 ntBASIC4.07□□□□□ -1.76
RTN3O95197 AL606662.1-201ENST00000445763 553 ntBASIC4.07□□□□□ -1.76
RTN3O95197 AC098826.2-201ENST00000452011 651 ntBASIC4.07□□□□□ -1.76
RTN3O95197 HMGN2P7-201ENST00000456186 273 ntBASIC4.07□□□□□ -1.76
RTN3O95197 CEACAMP4-201ENST00000457676 421 ntBASIC4.07□□□□□ -1.76
RTN3O95197 snoU13.8-201ENST00000458890 104 ntBASIC4.07□□□□□ -1.76
RTN3O95197 RN7SL542P-201ENST00000467147 294 ntBASIC4.07□□□□□ -1.76
RTN3O95197 RPL23AP14-201ENST00000468281 468 ntBASIC4.07□□□□□ -1.76
RTN3O95197 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC4.07□□□□□ -1.76
RTN3O95197 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC4.07□□□□□ -1.76
RTN3O95197 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC4.07□□□□□ -1.76
RTN3O95197 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC4.07□□□□□ -1.76
RTN3O95197 AC093677.1-201ENST00000514414 678 ntBASIC4.07□□□□□ -1.76
RTN3O95197 RN7SKP244-201ENST00000516513 307 ntBASIC4.07□□□□□ -1.76
RTN3O95197 AP000926.4-201ENST00000527351 454 ntBASIC4.07□□□□□ -1.76
RTN3O95197 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC4.07□□□□□ -1.76
RTN3O95197 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC4.07□□□□□ -1.76
RTN3O95197 MIR4429-201ENST00000580105 73 ntBASIC4.07□□□□□ -1.76
RTN3O95197 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC4.07□□□□□ -1.76
RTN3O95197 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC4.07□□□□□ -1.76
RTN3O95197 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC4.07□□□□□ -1.76
RTN3O95197 AL353997.4-201ENST00000586196 166 ntBASIC4.07□□□□□ -1.76
RTN3O95197 AC090186.1-201ENST00000605991 572 ntBASIC4.07□□□□□ -1.76
RTN3O95197 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
RTN3O95197 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC4.07□□□□□ -1.76
RTN3O95197 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
RTN3O95197 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
RTN3O95197 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
RTN3O95197 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC4.06□□□□□ -1.76
RTN3O95197 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
RTN3O95197 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
RTN3O95197 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC4.06□□□□□ -1.76
RTN3O95197 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
RTN3O95197 AL161781.1-201ENST00000354277 403 ntBASIC4.06□□□□□ -1.76
RTN3O95197 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
RTN3O95197 RNU6-1074P-201ENST00000383995 104 ntBASIC4.06□□□□□ -1.76
RTN3O95197 RNU2-47P-201ENST00000410649 186 ntBASIC4.06□□□□□ -1.76
RTN3O95197 RNU2-37P-201ENST00000410695 177 ntBASIC4.06□□□□□ -1.76
RTN3O95197 RAP1BP1-201ENST00000412709 553 ntBASIC4.06□□□□□ -1.76
RTN3O95197 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC4.06□□□□□ -1.76
RTN3O95197 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC4.06□□□□□ -1.76
RTN3O95197 KCTD9P3-201ENST00000434597 1169 ntBASIC4.06□□□□□ -1.76
RTN3O95197 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC4.06□□□□□ -1.76
RTN3O95197 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC4.06□□□□□ -1.76
RTN3O95197 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC4.06□□□□□ -1.76
RTN3O95197 MTND1P31-201ENST00000449206 961 ntBASIC4.06□□□□□ -1.76
RTN3O95197 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC4.06□□□□□ -1.76
RTN3O95197 LINC00888-204ENST00000487386 421 ntBASIC4.06□□□□□ -1.76
RTN3O95197 RPL31P61-201ENST00000496160 376 ntBASIC4.06□□□□□ -1.76
RTN3O95197 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC4.06□□□□□ -1.76
RTN3O95197 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC4.06□□□□□ -1.76
RTN3O95197 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC4.06□□□□□ -1.76
RTN3O95197 RNU6-352P-201ENST00000516908 107 ntBASIC4.06□□□□□ -1.76
RTN3O95197 AC008802.1-201ENST00000519121 791 ntBASIC4.06□□□□□ -1.76
RTN3O95197 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC4.06□□□□□ -1.76
RTN3O95197 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC4.06□□□□□ -1.76
RTN3O95197 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC4.06□□□□□ -1.76
RTN3O95197 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
RTN3O95197 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC4.06□□□□□ -1.76
RTN3O95197 AC022146.1-201ENST00000595307 847 ntBASIC4.06□□□□□ -1.76
RTN3O95197 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC4.06□□□□□ -1.76
RTN3O95197 AC024560.3-201ENST00000608482 349 ntBASIC4.06□□□□□ -1.76
RTN3O95197 AC006023.2-201ENST00000609916 167 ntBASIC4.06□□□□□ -1.76
RTN3O95197 AC131159.1-201ENST00000621854 213 ntBASIC4.06□□□□□ -1.76
RTN3O95197 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
RTN3O95197 AL645937.1-201ENST00000641739 1652 ntBASIC4.06□□□□□ -1.76
RTN3O95197 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
RTN3O95197 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
RTN3O95197 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
RTN3O95197 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC4.05□□□□□ -1.76
RTN3O95197 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
RTN3O95197 AP001486.2-201ENST00000561652 5113 ntBASIC4.05□□□□□ -1.76
RTN3O95197 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
RTN3O95197 RPL21P132-201ENST00000331267 462 ntBASIC4.05□□□□□ -1.76
RTN3O95197 Y_RNA.18-201ENST00000362461 102 ntBASIC4.05□□□□□ -1.76
RTN3O95197 RNU6-1155P-201ENST00000363554 107 ntBASIC4.05□□□□□ -1.76
RTN3O95197 RNU6-289P-201ENST00000364093 107 ntBASIC4.05□□□□□ -1.76
RTN3O95197 Y_RNA.234-201ENST00000364409 97 ntBASIC4.05□□□□□ -1.76
RTN3O95197 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC4.05□□□□□ -1.76
RTN3O95197 AL590084.2-201ENST00000401481 382 ntBASIC4.05□□□□□ -1.76
RTN3O95197 HSPE1P26-201ENST00000405341 275 ntBASIC4.05□□□□□ -1.76
RTN3O95197 RNU2-71P-201ENST00000411395 189 ntBASIC4.05□□□□□ -1.76
RTN3O95197 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC4.05□□□□□ -1.76
RTN3O95197 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms