Protein–RNA interactions for Protein: O75127

PTCD1, Pentatricopeptide repeat-containing protein 1, mitochondrial, humanhuman

Known RBP Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1O75127 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC6.19□□□□□ -1.42
PTCD1O75127 AC092470.1-201ENST00000546187 132 ntBASIC6.19□□□□□ -1.42
PTCD1O75127 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
PTCD1O75127 AC026464.5-201ENST00000562497 722 ntBASIC6.19□□□□□ -1.42
PTCD1O75127 MIR4420-201ENST00000583944 77 ntBASIC6.19□□□□□ -1.42
PTCD1O75127 PRPF19P1-201ENST00000584766 898 ntBASIC6.19□□□□□ -1.42
PTCD1O75127 7SK.7-201ENST00000603504 247 ntBASIC6.19□□□□□ -1.42
PTCD1O75127 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC6.19□□□□□ -1.42
PTCD1O75127 MIR6864-201ENST00000617935 70 ntBASIC6.19□□□□□ -1.42
PTCD1O75127 AC015908.5-201ENST00000623289 343 ntBASIC6.19□□□□□ -1.42
PTCD1O75127 AL078596.1-201ENST00000624856 447 ntBASIC6.19□□□□□ -1.42
PTCD1O75127 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC6.19□□□□□ -1.42
PTCD1O75127 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
PTCD1O75127 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
PTCD1O75127 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
PTCD1O75127 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC6.19□□□□□ -1.42
PTCD1O75127 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
PTCD1O75127 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
PTCD1O75127 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC6.18□□□□□ -1.42
PTCD1O75127 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
PTCD1O75127 AL118496.1-201ENST00000440201 1812 ntBASIC6.18□□□□□ -1.42
PTCD1O75127 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC6.18□□□□□ -1.42
PTCD1O75127 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
PTCD1O75127 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
PTCD1O75127 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
PTCD1O75127 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
PTCD1O75127 AC067945.1-201ENST00000342609 618 ntBASIC6.18□□□□□ -1.42
PTCD1O75127 RNU5A-8P-201ENST00000364102 114 ntBASIC6.18□□□□□ -1.42
PTCD1O75127 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
PTCD1O75127 RN7SKP16-201ENST00000410180 299 ntBASIC6.18□□□□□ -1.42
PTCD1O75127 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC6.18□□□□□ -1.42
PTCD1O75127 AL645937.1-202ENST00000421799 937 ntBASIC6.18□□□□□ -1.42
PTCD1O75127 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC6.18□□□□□ -1.42
PTCD1O75127 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC6.18□□□□□ -1.42
PTCD1O75127 ERLEC1P1-201ENST00000433806 578 ntBASIC6.18□□□□□ -1.42
PTCD1O75127 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC6.18□□□□□ -1.42
PTCD1O75127 RNU6-329P-201ENST00000459618 107 ntBASIC6.18□□□□□ -1.42
PTCD1O75127 RPS15AP36-201ENST00000492022 382 ntBASIC6.18□□□□□ -1.42
PTCD1O75127 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC6.18□□□□□ -1.42
PTCD1O75127 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC6.18□□□□□ -1.42
PTCD1O75127 MEPE-206ENST00000511670 550 ntTSL 4 BASIC6.18□□□□□ -1.42
PTCD1O75127 NARSP2-201ENST00000518524 679 ntBASIC6.18□□□□□ -1.42
PTCD1O75127 SUMO2P20-201ENST00000520803 283 ntBASIC6.18□□□□□ -1.42
PTCD1O75127 AC100784.1-201ENST00000522790 310 ntBASIC6.18□□□□□ -1.42
PTCD1O75127 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC6.18□□□□□ -1.42
PTCD1O75127 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC6.18□□□□□ -1.42
PTCD1O75127 AC128657.1-201ENST00000549459 145 ntBASIC6.18□□□□□ -1.42
PTCD1O75127 AC025588.3-201ENST00000604182 274 ntBASIC6.18□□□□□ -1.42
PTCD1O75127 AL121992.2-201ENST00000606262 256 ntBASIC6.18□□□□□ -1.42
PTCD1O75127 AC245517.5-201ENST00000611529 162 ntBASIC6.18□□□□□ -1.42
PTCD1O75127 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC6.18□□□□□ -1.42
PTCD1O75127 LDHA-225ENST00000625635 141 ntTSL 5 BASIC6.18□□□□□ -1.42
PTCD1O75127 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
PTCD1O75127 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC6.18□□□□□ -1.42
PTCD1O75127 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
PTCD1O75127 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC6.18□□□□□ -1.42
PTCD1O75127 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC6.18□□□□□ -1.42
PTCD1O75127 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
PTCD1O75127 AP001029.2-203ENST00000589795 4910 ntBASIC6.17□□□□□ -1.42
PTCD1O75127 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
PTCD1O75127 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC6.17□□□□□ -1.42
PTCD1O75127 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC6.17□□□□□ -1.42
PTCD1O75127 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
PTCD1O75127 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
PTCD1O75127 TLK1P1-201ENST00000456760 2440 ntBASIC6.17□□□□□ -1.42
PTCD1O75127 ANKRD26P2-201ENST00000445530 1710 ntBASIC6.17□□□□□ -1.42
PTCD1O75127 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
PTCD1O75127 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
PTCD1O75127 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC6.17□□□□□ -1.42
PTCD1O75127 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC6.17□□□□□ -1.42
PTCD1O75127 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC6.17□□□□□ -1.42
PTCD1O75127 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
PTCD1O75127 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
PTCD1O75127 RNU1-130P-201ENST00000363930 160 ntBASIC6.17□□□□□ -1.42
PTCD1O75127 RNA5SP397-201ENST00000391323 118 ntBASIC6.17□□□□□ -1.42
PTCD1O75127 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
PTCD1O75127 RNU2-39P-201ENST00000410604 198 ntBASIC6.17□□□□□ -1.42
PTCD1O75127 AC245054.2-201ENST00000415639 319 ntBASIC6.17□□□□□ -1.42
PTCD1O75127 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC6.17□□□□□ -1.42
PTCD1O75127 Z82205.1-201ENST00000428456 297 ntBASIC6.17□□□□□ -1.42
PTCD1O75127 RPS17P8-201ENST00000434525 335 ntBASIC6.17□□□□□ -1.42
PTCD1O75127 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC6.17□□□□□ -1.42
PTCD1O75127 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC6.17□□□□□ -1.42
PTCD1O75127 RN7SL41P-201ENST00000476144 297 ntBASIC6.17□□□□□ -1.42
PTCD1O75127 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC6.17□□□□□ -1.42
PTCD1O75127 AC004062.1-201ENST00000509926 645 ntBASIC6.17□□□□□ -1.42
PTCD1O75127 FTH1P21-201ENST00000512179 511 ntBASIC6.17□□□□□ -1.42
PTCD1O75127 AC011979.2-201ENST00000527568 352 ntBASIC6.17□□□□□ -1.42
PTCD1O75127 OR5B10P-201ENST00000532869 642 ntBASIC6.17□□□□□ -1.42
PTCD1O75127 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC6.17□□□□□ -1.42
PTCD1O75127 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC6.17□□□□□ -1.42
PTCD1O75127 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC6.17□□□□□ -1.42
PTCD1O75127 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC6.17□□□□□ -1.42
PTCD1O75127 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC6.17□□□□□ -1.42
PTCD1O75127 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC6.17□□□□□ -1.42
PTCD1O75127 RNU6-89P-201ENST00000606519 100 ntBASIC6.17□□□□□ -1.42
PTCD1O75127 AC123768.4-201ENST00000616244 701 ntBASIC6.17□□□□□ -1.42
PTCD1O75127 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
PTCD1O75127 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
PTCD1O75127 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms