Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 AC135721.1-201ENST00000497954 479 ntBASIC6.5□□□□□ -1.37
ACTN4O43707 HMGB1P21-201ENST00000502313 581 ntBASIC6.5□□□□□ -1.37
ACTN4O43707 COX7A2P2-201ENST00000505291 250 ntBASIC6.5□□□□□ -1.37
ACTN4O43707 AC011411.1-201ENST00000509592 876 ntBASIC6.5□□□□□ -1.37
ACTN4O43707 Y_RNA.687-201ENST00000516558 91 ntBASIC6.5□□□□□ -1.37
ACTN4O43707 HIGD1AP5-201ENST00000529959 259 ntBASIC6.5□□□□□ -1.37
ACTN4O43707 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC6.5□□□□□ -1.37
ACTN4O43707 AC006363.1-201ENST00000603806 463 ntBASIC6.5□□□□□ -1.37
ACTN4O43707 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC6.5□□□□□ -1.37
ACTN4O43707 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC6.5□□□□□ -1.37
ACTN4O43707 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC6.5□□□□□ -1.37
ACTN4O43707 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
ACTN4O43707 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC6.5□□□□□ -1.37
ACTN4O43707 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
ACTN4O43707 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
ACTN4O43707 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
ACTN4O43707 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
ACTN4O43707 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC6.5□□□□□ -1.37
ACTN4O43707 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
ACTN4O43707 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC6.49□□□□□ -1.37
ACTN4O43707 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC6.49□□□□□ -1.37
ACTN4O43707 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
ACTN4O43707 AC114774.1-201ENST00000507410 1770 ntBASIC6.49□□□□□ -1.37
ACTN4O43707 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
ACTN4O43707 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
ACTN4O43707 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC6.49□□□□□ -1.37
ACTN4O43707 RNU6-1284P-201ENST00000363701 100 ntBASIC6.49□□□□□ -1.37
ACTN4O43707 Y_RNA.199-201ENST00000364014 102 ntBASIC6.49□□□□□ -1.37
ACTN4O43707 SMIM11P1-201ENST00000369586 178 ntBASIC6.49□□□□□ -1.37
ACTN4O43707 RNU1-136P-201ENST00000384181 164 ntBASIC6.49□□□□□ -1.37
ACTN4O43707 RPL11P3-201ENST00000395256 523 ntBASIC6.49□□□□□ -1.37
ACTN4O43707 TIMM8BP2-201ENST00000445940 251 ntBASIC6.49□□□□□ -1.37
ACTN4O43707 RPS17P13-201ENST00000448974 407 ntBASIC6.49□□□□□ -1.37
ACTN4O43707 RNU1-88P-201ENST00000459274 128 ntBASIC6.49□□□□□ -1.37
ACTN4O43707 SNRPCP3-201ENST00000474888 476 ntBASIC6.49□□□□□ -1.37
ACTN4O43707 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC6.49□□□□□ -1.37
ACTN4O43707 AC025884.1-201ENST00000556034 378 ntBASIC6.49□□□□□ -1.37
ACTN4O43707 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC6.49□□□□□ -1.37
ACTN4O43707 AL161616.1-201ENST00000611867 286 ntBASIC6.49□□□□□ -1.37
ACTN4O43707 MIR1244-1-201ENST00000612829 85 ntBASIC6.49□□□□□ -1.37
ACTN4O43707 AC021753.1-201ENST00000635724 168 ntBASIC6.49□□□□□ -1.37
ACTN4O43707 MIR1244-3-201ENST00000635744 85 ntBASIC6.49□□□□□ -1.37
ACTN4O43707 MIR1244-2-201ENST00000636449 85 ntBASIC6.49□□□□□ -1.37
ACTN4O43707 MIR1244-4-202ENST00000636813 85 ntBASIC6.49□□□□□ -1.37
ACTN4O43707 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
ACTN4O43707 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
ACTN4O43707 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
ACTN4O43707 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC6.49□□□□□ -1.37
ACTN4O43707 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
ACTN4O43707 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
ACTN4O43707 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC6.49□□□□□ -1.37
ACTN4O43707 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC6.49□□□□□ -1.37
ACTN4O43707 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
ACTN4O43707 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
ACTN4O43707 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
ACTN4O43707 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
ACTN4O43707 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
ACTN4O43707 GTF2IP4-201ENST00000453092 2054 ntBASIC6.48□□□□□ -1.37
ACTN4O43707 Y_RNA.170-201ENST00000363746 110 ntBASIC6.48□□□□□ -1.37
ACTN4O43707 RNU6-729P-201ENST00000384399 107 ntBASIC6.48□□□□□ -1.37
ACTN4O43707 RNU6-790P-201ENST00000384479 105 ntBASIC6.48□□□□□ -1.37
ACTN4O43707 RNU11-201ENST00000387069 134 ntBASIC6.48□□□□□ -1.37
ACTN4O43707 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC6.48□□□□□ -1.37
ACTN4O43707 RNU2-20P-201ENST00000410425 191 ntBASIC6.48□□□□□ -1.37
ACTN4O43707 RNU6-130P-201ENST00000411112 103 ntBASIC6.48□□□□□ -1.37
ACTN4O43707 AL354868.1-201ENST00000417077 482 ntBASIC6.48□□□□□ -1.37
ACTN4O43707 AL445305.1-201ENST00000432577 575 ntBASIC6.48□□□□□ -1.37
ACTN4O43707 AC099670.2-201ENST00000435130 321 ntBASIC6.48□□□□□ -1.37
ACTN4O43707 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC6.48□□□□□ -1.37
ACTN4O43707 HMGN1P2-201ENST00000445197 310 ntBASIC6.48□□□□□ -1.37
ACTN4O43707 PPIAP27-201ENST00000453800 265 ntBASIC6.48□□□□□ -1.37
ACTN4O43707 YRDCP3-201ENST00000456507 480 ntBASIC6.48□□□□□ -1.37
ACTN4O43707 RNU7-138P-201ENST00000459479 64 ntBASIC6.48□□□□□ -1.37
ACTN4O43707 AL117692.1-201ENST00000494283 713 ntBASIC6.48□□□□□ -1.37
ACTN4O43707 AC005912.1-201ENST00000495392 255 ntBASIC6.48□□□□□ -1.37
ACTN4O43707 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC6.48□□□□□ -1.37
ACTN4O43707 SCARNA18.1-201ENST00000516330 83 ntBASIC6.48□□□□□ -1.37
ACTN4O43707 CDH12P4-201ENST00000517835 295 ntBASIC6.48□□□□□ -1.37
ACTN4O43707 CDH12P3-201ENST00000517935 295 ntBASIC6.48□□□□□ -1.37
ACTN4O43707 AC139365.2-201ENST00000517972 253 ntBASIC6.48□□□□□ -1.37
ACTN4O43707 CDH12P1-201ENST00000518435 295 ntBASIC6.48□□□□□ -1.37
ACTN4O43707 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC6.48□□□□□ -1.37
ACTN4O43707 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC6.48□□□□□ -1.37
ACTN4O43707 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC6.48□□□□□ -1.37
ACTN4O43707 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC6.48□□□□□ -1.37
ACTN4O43707 AC126177.3-201ENST00000551839 688 ntBASIC6.48□□□□□ -1.37
ACTN4O43707 MIR3154-201ENST00000577829 84 ntBASIC6.48□□□□□ -1.37
ACTN4O43707 AL360012.1-201ENST00000602813 131 ntBASIC6.48□□□□□ -1.37
ACTN4O43707 AP001485.1-201ENST00000604799 199 ntBASIC6.48□□□□□ -1.37
ACTN4O43707 MIR6793-201ENST00000612376 63 ntBASIC6.48□□□□□ -1.37
ACTN4O43707 AC245014.3-201ENST00000618589 347 ntBASIC6.48□□□□□ -1.37
ACTN4O43707 AP001784.1-201ENST00000624107 428 ntBASIC6.48□□□□□ -1.37
ACTN4O43707 TEX41-293ENST00000630451 690 ntTSL 5 BASIC6.48□□□□□ -1.37
ACTN4O43707 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
ACTN4O43707 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
ACTN4O43707 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
ACTN4O43707 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
ACTN4O43707 IRF5P1-201ENST00000504852 2164 ntBASIC6.48□□□□□ -1.37
ACTN4O43707 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC6.48□□□□□ -1.37
ACTN4O43707 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms