Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC4.03□□□□□ -1.76
SMAD6O43541 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC4.03□□□□□ -1.76
SMAD6O43541 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC4.03□□□□□ -1.76
SMAD6O43541 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
SMAD6O43541 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
SMAD6O43541 FAM92A1P2-202ENST00000504766 877 ntBASIC4.03□□□□□ -1.76
SMAD6O43541 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
SMAD6O43541 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC4.03□□□□□ -1.76
SMAD6O43541 NPM1P41-201ENST00000512920 831 ntBASIC4.03□□□□□ -1.76
SMAD6O43541 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
SMAD6O43541 RNY4P37-201ENST00000516225 96 ntBASIC4.03□□□□□ -1.76
SMAD6O43541 RNU6-352P-201ENST00000516908 107 ntBASIC4.03□□□□□ -1.76
SMAD6O43541 HMGB1P23-201ENST00000518743 568 ntBASIC4.03□□□□□ -1.76
SMAD6O43541 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC4.03□□□□□ -1.76
SMAD6O43541 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC4.03□□□□□ -1.76
SMAD6O43541 AP002453.2-201ENST00000533503 320 ntBASIC4.03□□□□□ -1.76
SMAD6O43541 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC4.03□□□□□ -1.76
SMAD6O43541 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC4.03□□□□□ -1.76
SMAD6O43541 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC4.03□□□□□ -1.76
SMAD6O43541 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC4.03□□□□□ -1.76
SMAD6O43541 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC4.03□□□□□ -1.76
SMAD6O43541 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC4.03□□□□□ -1.76
SMAD6O43541 PCMTD1P2-201ENST00000565017 355 ntBASIC4.03□□□□□ -1.76
SMAD6O43541 BPTFP1-201ENST00000579209 492 ntBASIC4.03□□□□□ -1.76
SMAD6O43541 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC4.03□□□□□ -1.76
SMAD6O43541 AL022154.1-201ENST00000604698 785 ntBASIC4.03□□□□□ -1.76
SMAD6O43541 AC098614.4-201ENST00000607601 462 ntBASIC4.03□□□□□ -1.76
SMAD6O43541 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC4.03□□□□□ -1.76
SMAD6O43541 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC4.03□□□□□ -1.76
SMAD6O43541 MIR4727-201ENST00000622232 55 ntBASIC4.03□□□□□ -1.76
SMAD6O43541 AC006065.5-201ENST00000623427 349 ntBASIC4.03□□□□□ -1.76
SMAD6O43541 CR381653.2-201ENST00000624041 768 ntBASIC4.03□□□□□ -1.76
SMAD6O43541 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
SMAD6O43541 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
SMAD6O43541 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.03□□□□□ -1.76
SMAD6O43541 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
SMAD6O43541 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
SMAD6O43541 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
SMAD6O43541 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC4.03□□□□□ -1.76
SMAD6O43541 NMD3P1-201ENST00000439704 1488 ntBASIC4.03□□□□□ -1.76
SMAD6O43541 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
SMAD6O43541 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.03□□□□□ -1.76
SMAD6O43541 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
SMAD6O43541 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
SMAD6O43541 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.03□□□□□ -1.77
SMAD6O43541 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.03□□□□□ -1.77
SMAD6O43541 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.77
SMAD6O43541 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
SMAD6O43541 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
SMAD6O43541 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC4.02□□□□□ -1.77
SMAD6O43541 PTER-201ENST00000298942 3448 ntTSL 5 BASIC4.02□□□□□ -1.77
SMAD6O43541 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
SMAD6O43541 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
SMAD6O43541 RNU6-839P-201ENST00000363347 108 ntBASIC4.02□□□□□ -1.77
SMAD6O43541 RNU6-619P-201ENST00000365146 108 ntBASIC4.02□□□□□ -1.77
SMAD6O43541 RNU4-12P-201ENST00000365233 139 ntBASIC4.02□□□□□ -1.77
SMAD6O43541 RNA5SP88-201ENST00000365560 109 ntBASIC4.02□□□□□ -1.77
SMAD6O43541 RNU6-356P-201ENST00000384140 107 ntBASIC4.02□□□□□ -1.77
SMAD6O43541 RNU6-761P-201ENST00000384148 107 ntBASIC4.02□□□□□ -1.77
SMAD6O43541 MTCYBP36-201ENST00000404146 440 ntBASIC4.02□□□□□ -1.77
SMAD6O43541 AL590290.1-201ENST00000405336 380 ntBASIC4.02□□□□□ -1.77
SMAD6O43541 MIR1284-201ENST00000408337 120 ntBASIC4.02□□□□□ -1.77
SMAD6O43541 MIR1303-201ENST00000408625 86 ntBASIC4.02□□□□□ -1.77
SMAD6O43541 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC4.02□□□□□ -1.77
SMAD6O43541 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.02□□□□□ -1.77
SMAD6O43541 AL034418.1-201ENST00000448675 860 ntBASIC4.02□□□□□ -1.77
SMAD6O43541 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC4.02□□□□□ -1.77
SMAD6O43541 ANP32BP2-201ENST00000454525 545 ntBASIC4.02□□□□□ -1.77
SMAD6O43541 KLF3P2-201ENST00000465138 268 ntBASIC4.02□□□□□ -1.77
SMAD6O43541 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC4.02□□□□□ -1.77
SMAD6O43541 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC4.02□□□□□ -1.77
SMAD6O43541 AP001086.1-201ENST00000494882 321 ntBASIC4.02□□□□□ -1.77
SMAD6O43541 AC098799.2-201ENST00000509466 868 ntBASIC4.02□□□□□ -1.77
SMAD6O43541 NDUFB4P9-201ENST00000511646 388 ntBASIC4.02□□□□□ -1.77
SMAD6O43541 RPL7L1P13-201ENST00000511702 739 ntBASIC4.02□□□□□ -1.77
SMAD6O43541 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC4.02□□□□□ -1.77
SMAD6O43541 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC4.02□□□□□ -1.77
SMAD6O43541 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.02□□□□□ -1.77
SMAD6O43541 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC4.02□□□□□ -1.77
SMAD6O43541 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.02□□□□□ -1.77
SMAD6O43541 AC124947.2-202ENST00000552735 133 ntBASIC4.02□□□□□ -1.77
SMAD6O43541 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC4.02□□□□□ -1.77
SMAD6O43541 MIR4644-201ENST00000579929 84 ntBASIC4.02□□□□□ -1.77
SMAD6O43541 AC007687.1-201ENST00000602704 304 ntBASIC4.02□□□□□ -1.77
SMAD6O43541 AC107214.2-201ENST00000608204 634 ntBASIC4.02□□□□□ -1.77
SMAD6O43541 AC243756.2-201ENST00000618406 463 ntBASIC4.02□□□□□ -1.77
SMAD6O43541 AL773545.4-201ENST00000637262 310 ntBASIC4.02□□□□□ -1.77
SMAD6O43541 AL513478.4-201ENST00000641636 310 ntBASIC4.02□□□□□ -1.77
SMAD6O43541 AC066616.2-201ENST00000559334 1481 ntBASIC4.02□□□□□ -1.77
SMAD6O43541 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.02□□□□□ -1.77
SMAD6O43541 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.02□□□□□ -1.77
SMAD6O43541 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
SMAD6O43541 MAPK10-372ENST00000641954 3413 ntBASIC4.02□□□□□ -1.77
SMAD6O43541 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC4.02□□□□□ -1.77
SMAD6O43541 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
SMAD6O43541 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
SMAD6O43541 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
SMAD6O43541 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
SMAD6O43541 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
SMAD6O43541 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 85.5 ms