Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 AC006960.1-201ENST00000419980 153 ntBASIC3.28□□□□□ -1.88
PDLIM1O00151 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC3.28□□□□□ -1.88
PDLIM1O00151 NANOGP5-201ENST00000424456 877 ntBASIC3.28□□□□□ -1.88
PDLIM1O00151 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC3.28□□□□□ -1.88
PDLIM1O00151 NANOGP2-201ENST00000435391 727 ntBASIC3.28□□□□□ -1.88
PDLIM1O00151 AL645638.1-201ENST00000440519 361 ntBASIC3.28□□□□□ -1.88
PDLIM1O00151 VN1R10P-201ENST00000447106 875 ntBASIC3.28□□□□□ -1.88
PDLIM1O00151 RAB9AP1-201ENST00000449393 573 ntBASIC3.28□□□□□ -1.88
PDLIM1O00151 AC007967.1-201ENST00000455422 1159 ntBASIC3.28□□□□□ -1.88
PDLIM1O00151 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC3.28□□□□□ -1.88
PDLIM1O00151 AC005410.1-202ENST00000460347 485 ntBASIC3.28□□□□□ -1.88
PDLIM1O00151 PABPC1P3-201ENST00000469174 459 ntBASIC3.28□□□□□ -1.88
PDLIM1O00151 ACTR3P3-201ENST00000480448 893 ntBASIC3.28□□□□□ -1.88
PDLIM1O00151 GTF2IP9-201ENST00000502460 301 ntBASIC3.28□□□□□ -1.88
PDLIM1O00151 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
PDLIM1O00151 MTCYBP16-201ENST00000509187 1129 ntBASIC3.28□□□□□ -1.88
PDLIM1O00151 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.28□□□□□ -1.88
PDLIM1O00151 RNA5SP76-201ENST00000516277 87 ntBASIC3.28□□□□□ -1.88
PDLIM1O00151 RNU6-1225P-201ENST00000516336 65 ntBASIC3.28□□□□□ -1.88
PDLIM1O00151 SNORA70.19-201ENST00000516717 90 ntBASIC3.28□□□□□ -1.88
PDLIM1O00151 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC3.28□□□□□ -1.88
PDLIM1O00151 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC3.28□□□□□ -1.88
PDLIM1O00151 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.28□□□□□ -1.88
PDLIM1O00151 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
PDLIM1O00151 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC3.28□□□□□ -1.88
PDLIM1O00151 RPP40P2-201ENST00000603596 712 ntBASIC3.28□□□□□ -1.88
PDLIM1O00151 RNU4-5P-201ENST00000607255 135 ntBASIC3.28□□□□□ -1.88
PDLIM1O00151 AC009318.4-201ENST00000620496 486 ntBASIC3.28□□□□□ -1.88
PDLIM1O00151 AL356863.1-201ENST00000623378 1080 ntBASIC3.28□□□□□ -1.88
PDLIM1O00151 AC090772.4-201ENST00000623599 362 ntBASIC3.28□□□□□ -1.88
PDLIM1O00151 AC090617.7-201ENST00000623952 126 ntBASIC3.28□□□□□ -1.88
PDLIM1O00151 OR4G3P-201ENST00000633500 913 ntBASIC3.28□□□□□ -1.88
PDLIM1O00151 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
PDLIM1O00151 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
PDLIM1O00151 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
PDLIM1O00151 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
PDLIM1O00151 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.27□□□□□ -1.89
PDLIM1O00151 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
PDLIM1O00151 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
PDLIM1O00151 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
PDLIM1O00151 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC3.27□□□□□ -1.89
PDLIM1O00151 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
PDLIM1O00151 RPL7P26-201ENST00000333817 754 ntBASIC3.27□□□□□ -1.89
PDLIM1O00151 U3.6-201ENST00000363622 211 ntBASIC3.27□□□□□ -1.89
PDLIM1O00151 RNU4-68P-201ENST00000364314 141 ntBASIC3.27□□□□□ -1.89
PDLIM1O00151 SNRPEP2-201ENST00000397592 279 ntBASIC3.27□□□□□ -1.89
PDLIM1O00151 RPL7P60-201ENST00000397636 735 ntBASIC3.27□□□□□ -1.89
PDLIM1O00151 SLC9B1P2-201ENST00000398120 1184 ntBASIC3.27□□□□□ -1.89
PDLIM1O00151 SNORA11-201ENST00000408789 128 ntBASIC3.27□□□□□ -1.89
PDLIM1O00151 RNU4-22P-201ENST00000411058 166 ntBASIC3.27□□□□□ -1.89
PDLIM1O00151 OR1AA1P-201ENST00000419597 916 ntBASIC3.27□□□□□ -1.89
PDLIM1O00151 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC3.27□□□□□ -1.89
PDLIM1O00151 RPL7P44-201ENST00000424827 742 ntBASIC3.27□□□□□ -1.89
PDLIM1O00151 AC092648.1-201ENST00000425870 423 ntBASIC3.27□□□□□ -1.89
PDLIM1O00151 OFD1P12Y-201ENST00000427963 1207 ntBASIC3.27□□□□□ -1.89
PDLIM1O00151 RPL21P40-201ENST00000428586 483 ntBASIC3.27□□□□□ -1.89
PDLIM1O00151 AL390023.1-201ENST00000428836 262 ntBASIC3.27□□□□□ -1.89
PDLIM1O00151 OFD1P13Y-201ENST00000431179 1232 ntBASIC3.27□□□□□ -1.89
PDLIM1O00151 USP9YP24-201ENST00000434374 697 ntBASIC3.27□□□□□ -1.89
PDLIM1O00151 USP9YP17-201ENST00000444617 696 ntBASIC3.27□□□□□ -1.89
PDLIM1O00151 AC007327.1-201ENST00000447461 264 ntBASIC3.27□□□□□ -1.89
PDLIM1O00151 AL009048.1-201ENST00000450437 298 ntBASIC3.27□□□□□ -1.89
PDLIM1O00151 ZNF886P-201ENST00000450781 723 ntBASIC3.27□□□□□ -1.89
PDLIM1O00151 RFC5P1-201ENST00000454419 874 ntBASIC3.27□□□□□ -1.89
PDLIM1O00151 AC092155.2-201ENST00000454675 477 ntBASIC3.27□□□□□ -1.89
PDLIM1O00151 HMGN2P16-201ENST00000456802 261 ntBASIC3.27□□□□□ -1.89
PDLIM1O00151 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC3.27□□□□□ -1.89
PDLIM1O00151 SETP14-201ENST00000497538 873 ntBASIC3.27□□□□□ -1.89
PDLIM1O00151 OR5H5P-201ENST00000503164 928 ntBASIC3.27□□□□□ -1.89
PDLIM1O00151 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC3.27□□□□□ -1.89
PDLIM1O00151 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.27□□□□□ -1.89
PDLIM1O00151 PAICSP4-201ENST00000517543 1253 ntBASIC3.27□□□□□ -1.89
PDLIM1O00151 AC023632.4-201ENST00000517783 191 ntBASIC3.27□□□□□ -1.89
PDLIM1O00151 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC3.27□□□□□ -1.89
PDLIM1O00151 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC3.27□□□□□ -1.89
PDLIM1O00151 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC3.27□□□□□ -1.89
PDLIM1O00151 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC3.27□□□□□ -1.89
PDLIM1O00151 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC3.27□□□□□ -1.89
PDLIM1O00151 AC245884.10-201ENST00000597355 337 ntBASIC3.27□□□□□ -1.89
PDLIM1O00151 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.27□□□□□ -1.89
PDLIM1O00151 AC124312.4-201ENST00000605533 310 ntBASIC3.27□□□□□ -1.89
PDLIM1O00151 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
PDLIM1O00151 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC3.27□□□□□ -1.89
PDLIM1O00151 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.27□□□□□ -1.89
PDLIM1O00151 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.27□□□□□ -1.89
PDLIM1O00151 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.27□□□□□ -1.89
PDLIM1O00151 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.27□□□□□ -1.89
PDLIM1O00151 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
PDLIM1O00151 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
PDLIM1O00151 AL353746.1-201ENST00000566293 6881 ntBASIC3.27□□□□□ -1.89
PDLIM1O00151 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
PDLIM1O00151 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
PDLIM1O00151 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC3.26□□□□□ -1.89
PDLIM1O00151 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.26□□□□□ -1.89
PDLIM1O00151 GDI2P1-201ENST00000429312 1336 ntBASIC3.26□□□□□ -1.89
PDLIM1O00151 AC109315.1-201ENST00000584143 1347 ntBASIC3.26□□□□□ -1.89
PDLIM1O00151 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.26□□□□□ -1.89
PDLIM1O00151 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC3.26□□□□□ -1.89
PDLIM1O00151 RNU6-730P-201ENST00000383954 104 ntBASIC3.26□□□□□ -1.89
PDLIM1O00151 RNU1-101P-201ENST00000391171 127 ntBASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 132.2 ms