Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 AL672167.1-204ENST00000641875 3017 ntBASIC4.76□□□□□ -1.65
SHISA3A0PJX4 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.76□□□□□ -1.65
SHISA3A0PJX4 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
SHISA3A0PJX4 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
SHISA3A0PJX4 AL353796.1-201ENST00000561542 3241 ntBASIC4.76□□□□□ -1.65
SHISA3A0PJX4 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
SHISA3A0PJX4 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
SHISA3A0PJX4 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC4.75□□□□□ -1.65
SHISA3A0PJX4 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC4.75□□□□□ -1.65
SHISA3A0PJX4 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
SHISA3A0PJX4 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
SHISA3A0PJX4 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
SHISA3A0PJX4 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
SHISA3A0PJX4 AL137141.1-201ENST00000624622 4836 ntBASIC4.75□□□□□ -1.65
SHISA3A0PJX4 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
SHISA3A0PJX4 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
SHISA3A0PJX4 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
SHISA3A0PJX4 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
SHISA3A0PJX4 RNA5-8SP7-201ENST00000363443 155 ntBASIC4.75□□□□□ -1.65
SHISA3A0PJX4 RNU6-393P-201ENST00000384475 107 ntBASIC4.75□□□□□ -1.65
SHISA3A0PJX4 SNORD3H-201ENST00000384486 214 ntBASIC4.75□□□□□ -1.65
SHISA3A0PJX4 SNORA16.2-201ENST00000390991 127 ntBASIC4.75□□□□□ -1.65
SHISA3A0PJX4 CYB5AP4-201ENST00000396692 399 ntBASIC4.75□□□□□ -1.65
SHISA3A0PJX4 RNU4-6P-201ENST00000410804 122 ntBASIC4.75□□□□□ -1.65
SHISA3A0PJX4 RN7SKP58-201ENST00000411010 305 ntBASIC4.75□□□□□ -1.65
SHISA3A0PJX4 AC009310.1-201ENST00000414414 451 ntBASIC4.75□□□□□ -1.65
SHISA3A0PJX4 BX284632.2-201ENST00000421091 399 ntBASIC4.75□□□□□ -1.65
SHISA3A0PJX4 PLA2G12AP2-201ENST00000424744 264 ntBASIC4.75□□□□□ -1.65
SHISA3A0PJX4 FAR2P4-202ENST00000425399 584 ntBASIC4.75□□□□□ -1.65
SHISA3A0PJX4 CBX3P6-201ENST00000430257 527 ntBASIC4.75□□□□□ -1.65
SHISA3A0PJX4 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC4.75□□□□□ -1.65
SHISA3A0PJX4 AL591704.1-201ENST00000432574 275 ntBASIC4.75□□□□□ -1.65
SHISA3A0PJX4 AL353597.2-202ENST00000434901 373 ntBASIC4.75□□□□□ -1.65
SHISA3A0PJX4 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC4.75□□□□□ -1.65
SHISA3A0PJX4 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC4.75□□□□□ -1.65
SHISA3A0PJX4 AL359955.2-201ENST00000445380 353 ntBASIC4.75□□□□□ -1.65
SHISA3A0PJX4 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC4.75□□□□□ -1.65
SHISA3A0PJX4 AL450023.1-201ENST00000450868 751 ntBASIC4.75□□□□□ -1.65
SHISA3A0PJX4 AC009963.3-201ENST00000458090 486 ntBASIC4.75□□□□□ -1.65
SHISA3A0PJX4 MTATP8P1-201ENST00000467115 207 ntBASIC4.75□□□□□ -1.65
SHISA3A0PJX4 HMGB1P25-201ENST00000468402 607 ntBASIC4.75□□□□□ -1.65
SHISA3A0PJX4 AC128713.1-201ENST00000471495 306 ntBASIC4.75□□□□□ -1.65
SHISA3A0PJX4 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC4.75□□□□□ -1.65
SHISA3A0PJX4 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC4.75□□□□□ -1.65
SHISA3A0PJX4 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC4.75□□□□□ -1.65
SHISA3A0PJX4 IGKV2D-36-201ENST00000518643 226 ntBASIC4.75□□□□□ -1.65
SHISA3A0PJX4 IL7-206ENST00000520269 456 ntTSL 3 BASIC4.75□□□□□ -1.65
SHISA3A0PJX4 LECT2-205ENST00000522943 574 ntTSL 3 BASIC4.75□□□□□ -1.65
SHISA3A0PJX4 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC4.75□□□□□ -1.65
SHISA3A0PJX4 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC4.75□□□□□ -1.65
SHISA3A0PJX4 AC027026.1-201ENST00000532323 742 ntBASIC4.75□□□□□ -1.65
SHISA3A0PJX4 DYNLL1P4-201ENST00000549314 266 ntBASIC4.75□□□□□ -1.65
SHISA3A0PJX4 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC4.75□□□□□ -1.65
SHISA3A0PJX4 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC4.75□□□□□ -1.65
SHISA3A0PJX4 AL354984.3-201ENST00000604803 325 ntBASIC4.75□□□□□ -1.65
SHISA3A0PJX4 AL670379.4-201ENST00000605279 254 ntBASIC4.75□□□□□ -1.65
SHISA3A0PJX4 PRR13P7-201ENST00000605538 430 ntBASIC4.75□□□□□ -1.65
SHISA3A0PJX4 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC4.75□□□□□ -1.65
SHISA3A0PJX4 AC007485.1-201ENST00000616755 206 ntBASIC4.75□□□□□ -1.65
SHISA3A0PJX4 AC007998.5-201ENST00000622938 237 ntBASIC4.75□□□□□ -1.65
SHISA3A0PJX4 AC110801.1-201ENST00000623590 212 ntBASIC4.75□□□□□ -1.65
SHISA3A0PJX4 MIR4496-201ENST00000635896 61 ntBASIC4.75□□□□□ -1.65
SHISA3A0PJX4 AL451142.2-201ENST00000429076 2090 ntBASIC4.75□□□□□ -1.65
SHISA3A0PJX4 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
SHISA3A0PJX4 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
SHISA3A0PJX4 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
SHISA3A0PJX4 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
SHISA3A0PJX4 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
SHISA3A0PJX4 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
SHISA3A0PJX4 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC4.74□□□□□ -1.65
SHISA3A0PJX4 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
SHISA3A0PJX4 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC4.74□□□□□ -1.65
SHISA3A0PJX4 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC4.74□□□□□ -1.65
SHISA3A0PJX4 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
SHISA3A0PJX4 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
SHISA3A0PJX4 RNA5SP433-201ENST00000364491 114 ntBASIC4.74□□□□□ -1.65
SHISA3A0PJX4 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
SHISA3A0PJX4 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
SHISA3A0PJX4 RNU6-146P-201ENST00000384602 108 ntBASIC4.74□□□□□ -1.65
SHISA3A0PJX4 MIR1250-201ENST00000408098 113 ntBASIC4.74□□□□□ -1.65
SHISA3A0PJX4 RNU6-847P-201ENST00000411115 108 ntBASIC4.74□□□□□ -1.65
SHISA3A0PJX4 HMGB3P2-201ENST00000411913 584 ntBASIC4.74□□□□□ -1.65
SHISA3A0PJX4 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC4.74□□□□□ -1.65
SHISA3A0PJX4 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC4.74□□□□□ -1.65
SHISA3A0PJX4 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC4.74□□□□□ -1.65
SHISA3A0PJX4 RPL12P34-201ENST00000424532 479 ntBASIC4.74□□□□□ -1.65
SHISA3A0PJX4 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC4.74□□□□□ -1.65
SHISA3A0PJX4 AC126120.1-201ENST00000431082 470 ntBASIC4.74□□□□□ -1.65
SHISA3A0PJX4 AL389925.1-201ENST00000432257 728 ntBASIC4.74□□□□□ -1.65
SHISA3A0PJX4 ELOCP18-201ENST00000434209 337 ntBASIC4.74□□□□□ -1.65
SHISA3A0PJX4 ATP6V1E1P1-201ENST00000439215 681 ntBASIC4.74□□□□□ -1.65
SHISA3A0PJX4 GAPDHP27-201ENST00000447427 1020 ntBASIC4.74□□□□□ -1.65
SHISA3A0PJX4 RPL12P25-201ENST00000455592 494 ntBASIC4.74□□□□□ -1.65
SHISA3A0PJX4 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC4.74□□□□□ -1.65
SHISA3A0PJX4 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC4.74□□□□□ -1.65
SHISA3A0PJX4 AC026801.1-201ENST00000497178 464 ntBASIC4.74□□□□□ -1.65
SHISA3A0PJX4 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC4.74□□□□□ -1.65
SHISA3A0PJX4 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC4.74□□□□□ -1.65
SHISA3A0PJX4 RNU6-513P-201ENST00000516104 104 ntBASIC4.74□□□□□ -1.65
SHISA3A0PJX4 RNU6-941P-201ENST00000516346 108 ntBASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 94.6 ms