Protein–RNA interactions for Protein: Q9Y5E6

PCDHB3, Protocadherin beta-3, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3Q9Y5E6 AC015982.1-201ENST00000608113 465 ntBASIC6.2□□□□□ -1.42
PCDHB3Q9Y5E6 MIR6085-201ENST00000618314 110 ntBASIC6.2□□□□□ -1.42
PCDHB3Q9Y5E6 AC091895.1-201ENST00000624494 256 ntBASIC6.2□□□□□ -1.42
PCDHB3Q9Y5E6 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC6.2□□□□□ -1.42
PCDHB3Q9Y5E6 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC6.2□□□□□ -1.42
PCDHB3Q9Y5E6 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC6.2□□□□□ -1.42
PCDHB3Q9Y5E6 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
PCDHB3Q9Y5E6 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
PCDHB3Q9Y5E6 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
PCDHB3Q9Y5E6 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
PCDHB3Q9Y5E6 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
PCDHB3Q9Y5E6 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
PCDHB3Q9Y5E6 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC6.2□□□□□ -1.42
PCDHB3Q9Y5E6 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
PCDHB3Q9Y5E6 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC6.2□□□□□ -1.42
PCDHB3Q9Y5E6 AC020633.1-201ENST00000468439 2247 ntBASIC6.19□□□□□ -1.42
PCDHB3Q9Y5E6 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
PCDHB3Q9Y5E6 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC6.19□□□□□ -1.42
PCDHB3Q9Y5E6 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC6.19□□□□□ -1.42
PCDHB3Q9Y5E6 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC6.19□□□□□ -1.42
PCDHB3Q9Y5E6 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC6.19□□□□□ -1.42
PCDHB3Q9Y5E6 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
PCDHB3Q9Y5E6 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
PCDHB3Q9Y5E6 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC6.19□□□□□ -1.42
PCDHB3Q9Y5E6 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
PCDHB3Q9Y5E6 RNU6-44P-201ENST00000384045 107 ntBASIC6.19□□□□□ -1.42
PCDHB3Q9Y5E6 AL033519.2-201ENST00000403958 392 ntBASIC6.19□□□□□ -1.42
PCDHB3Q9Y5E6 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC6.19□□□□□ -1.42
PCDHB3Q9Y5E6 CEACAMP1-201ENST00000434624 1035 ntBASIC6.19□□□□□ -1.42
PCDHB3Q9Y5E6 GAPDHP59-201ENST00000435908 267 ntBASIC6.19□□□□□ -1.42
PCDHB3Q9Y5E6 EIF5AP4-201ENST00000441206 465 ntBASIC6.19□□□□□ -1.42
PCDHB3Q9Y5E6 snoU13.7-201ENST00000459220 104 ntBASIC6.19□□□□□ -1.42
PCDHB3Q9Y5E6 AC018638.3-201ENST00000461273 132 ntBASIC6.19□□□□□ -1.42
PCDHB3Q9Y5E6 RN7SL221P-201ENST00000466190 281 ntBASIC6.19□□□□□ -1.42
PCDHB3Q9Y5E6 PPP1R11P1-201ENST00000486095 376 ntBASIC6.19□□□□□ -1.42
PCDHB3Q9Y5E6 RPL30P10-201ENST00000488148 337 ntBASIC6.19□□□□□ -1.42
PCDHB3Q9Y5E6 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC6.19□□□□□ -1.42
PCDHB3Q9Y5E6 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC6.19□□□□□ -1.42
PCDHB3Q9Y5E6 RN7SKP67-201ENST00000515905 235 ntBASIC6.19□□□□□ -1.42
PCDHB3Q9Y5E6 RNU6-347P-201ENST00000516658 105 ntBASIC6.19□□□□□ -1.42
PCDHB3Q9Y5E6 RN7SKP60-201ENST00000516985 239 ntBASIC6.19□□□□□ -1.42
PCDHB3Q9Y5E6 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC6.19□□□□□ -1.42
PCDHB3Q9Y5E6 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC6.19□□□□□ -1.42
PCDHB3Q9Y5E6 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
PCDHB3Q9Y5E6 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
PCDHB3Q9Y5E6 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC6.19□□□□□ -1.42
PCDHB3Q9Y5E6 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC6.19□□□□□ -1.42
PCDHB3Q9Y5E6 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC6.19□□□□□ -1.42
PCDHB3Q9Y5E6 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC6.19□□□□□ -1.42
PCDHB3Q9Y5E6 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
PCDHB3Q9Y5E6 OR1F2P-201ENST00000570470 933 ntBASIC6.19□□□□□ -1.42
PCDHB3Q9Y5E6 AC120057.2-201ENST00000571520 271 ntBASIC6.19□□□□□ -1.42
PCDHB3Q9Y5E6 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC6.19□□□□□ -1.42
PCDHB3Q9Y5E6 AL162424.1-201ENST00000602325 221 ntBASIC6.19□□□□□ -1.42
PCDHB3Q9Y5E6 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC6.19□□□□□ -1.42
PCDHB3Q9Y5E6 RN7SL261P-201ENST00000613441 282 ntBASIC6.19□□□□□ -1.42
PCDHB3Q9Y5E6 SNORD39.4-201ENST00000620099 78 ntBASIC6.19□□□□□ -1.42
PCDHB3Q9Y5E6 AC097372.5-201ENST00000623665 376 ntBASIC6.19□□□□□ -1.42
PCDHB3Q9Y5E6 LINC02495-203ENST00000636704 242 ntBASIC6.19□□□□□ -1.42
PCDHB3Q9Y5E6 AC007842.1-201ENST00000597336 2039 ntBASIC6.19□□□□□ -1.42
PCDHB3Q9Y5E6 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
PCDHB3Q9Y5E6 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
PCDHB3Q9Y5E6 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC6.19□□□□□ -1.42
PCDHB3Q9Y5E6 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
PCDHB3Q9Y5E6 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
PCDHB3Q9Y5E6 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC6.19□□□□□ -1.42
PCDHB3Q9Y5E6 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC6.19□□□□□ -1.42
PCDHB3Q9Y5E6 MTND5P9-201ENST00000503854 1755 ntBASIC6.18□□□□□ -1.42
PCDHB3Q9Y5E6 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC6.18□□□□□ -1.42
PCDHB3Q9Y5E6 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
PCDHB3Q9Y5E6 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
PCDHB3Q9Y5E6 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
PCDHB3Q9Y5E6 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
PCDHB3Q9Y5E6 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
PCDHB3Q9Y5E6 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
PCDHB3Q9Y5E6 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC6.18□□□□□ -1.42
PCDHB3Q9Y5E6 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
PCDHB3Q9Y5E6 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC6.18□□□□□ -1.42
PCDHB3Q9Y5E6 RN7SKP292-201ENST00000365522 317 ntBASIC6.18□□□□□ -1.42
PCDHB3Q9Y5E6 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC6.18□□□□□ -1.42
PCDHB3Q9Y5E6 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
PCDHB3Q9Y5E6 RPL21P75-201ENST00000396599 483 ntBASIC6.18□□□□□ -1.42
PCDHB3Q9Y5E6 RPL21P28-201ENST00000401418 483 ntBASIC6.18□□□□□ -1.42
PCDHB3Q9Y5E6 AL079342.1-201ENST00000401460 267 ntBASIC6.18□□□□□ -1.42
PCDHB3Q9Y5E6 HMGA1P8-201ENST00000414130 321 ntBASIC6.18□□□□□ -1.42
PCDHB3Q9Y5E6 AL590556.1-201ENST00000423231 483 ntBASIC6.18□□□□□ -1.42
PCDHB3Q9Y5E6 AL591043.1-201ENST00000432461 424 ntBASIC6.18□□□□□ -1.42
PCDHB3Q9Y5E6 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
PCDHB3Q9Y5E6 AP000936.3-201ENST00000438127 255 ntBASIC6.18□□□□□ -1.42
PCDHB3Q9Y5E6 COX4I1P2-201ENST00000447446 547 ntBASIC6.18□□□□□ -1.42
PCDHB3Q9Y5E6 HSPE1P25-201ENST00000455484 251 ntBASIC6.18□□□□□ -1.42
PCDHB3Q9Y5E6 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC6.18□□□□□ -1.42
PCDHB3Q9Y5E6 AC009963.3-201ENST00000458090 486 ntBASIC6.18□□□□□ -1.42
PCDHB3Q9Y5E6 SNX18P26-201ENST00000458433 740 ntBASIC6.18□□□□□ -1.42
PCDHB3Q9Y5E6 RPL21P11-201ENST00000461458 483 ntBASIC6.18□□□□□ -1.42
PCDHB3Q9Y5E6 RPL21P39-201ENST00000463605 483 ntBASIC6.18□□□□□ -1.42
PCDHB3Q9Y5E6 VN1R105P-201ENST00000486595 910 ntBASIC6.18□□□□□ -1.42
PCDHB3Q9Y5E6 AC132942.1-201ENST00000486753 483 ntBASIC6.18□□□□□ -1.42
PCDHB3Q9Y5E6 AC093591.1-201ENST00000491435 481 ntBASIC6.18□□□□□ -1.42
PCDHB3Q9Y5E6 RPL21P16-201ENST00000495531 483 ntBASIC6.18□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms