Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.83□□□□□ -1.96
SCN11AQ9UI33 GABPAP-201ENST00000419271 1356 ntBASIC2.83□□□□□ -1.96
SCN11AQ9UI33 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC2.83□□□□□ -1.96
SCN11AQ9UI33 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.83□□□□□ -1.96
SCN11AQ9UI33 RPL23AP36-201ENST00000413895 458 ntBASIC2.83□□□□□ -1.96
SCN11AQ9UI33 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.83□□□□□ -1.96
SCN11AQ9UI33 AL353093.1-201ENST00000441292 436 ntBASIC2.83□□□□□ -1.96
SCN11AQ9UI33 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC2.83□□□□□ -1.96
SCN11AQ9UI33 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.83□□□□□ -1.96
SCN11AQ9UI33 AC073348.1-201ENST00000623002 331 ntBASIC2.83□□□□□ -1.96
SCN11AQ9UI33 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC2.83□□□□□ -1.96
SCN11AQ9UI33 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC2.83□□□□□ -1.96
SCN11AQ9UI33 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC2.83□□□□□ -1.96
SCN11AQ9UI33 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.82□□□□□ -1.96
SCN11AQ9UI33 RNA5SP88-201ENST00000365560 109 ntBASIC2.82□□□□□ -1.96
SCN11AQ9UI33 RNU6-146P-201ENST00000384602 108 ntBASIC2.82□□□□□ -1.96
SCN11AQ9UI33 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
SCN11AQ9UI33 DHFRP5-201ENST00000406944 564 ntBASIC2.82□□□□□ -1.96
SCN11AQ9UI33 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC2.82□□□□□ -1.96
SCN11AQ9UI33 AL009174.1-201ENST00000426577 416 ntBASIC2.82□□□□□ -1.96
SCN11AQ9UI33 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.82□□□□□ -1.96
SCN11AQ9UI33 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC2.82□□□□□ -1.96
SCN11AQ9UI33 FAM92A1P2-202ENST00000504766 877 ntBASIC2.82□□□□□ -1.96
SCN11AQ9UI33 OR5BN1P-201ENST00000532955 829 ntBASIC2.82□□□□□ -1.96
SCN11AQ9UI33 AC012182.1-201ENST00000570133 895 ntBASIC2.82□□□□□ -1.96
SCN11AQ9UI33 AC023043.2-201ENST00000589678 1026 ntBASIC2.82□□□□□ -1.96
SCN11AQ9UI33 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC2.82□□□□□ -1.96
SCN11AQ9UI33 MIR219B-201ENST00000637023 88 ntBASIC2.82□□□□□ -1.96
SCN11AQ9UI33 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
SCN11AQ9UI33 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
SCN11AQ9UI33 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.82□□□□□ -1.96
SCN11AQ9UI33 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.82□□□□□ -1.96
SCN11AQ9UI33 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
SCN11AQ9UI33 Y_RNA.508-201ENST00000384502 114 ntBASIC2.82□□□□□ -1.96
SCN11AQ9UI33 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
SCN11AQ9UI33 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC2.82□□□□□ -1.96
SCN11AQ9UI33 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC2.82□□□□□ -1.96
SCN11AQ9UI33 NPM1P49-201ENST00000448027 714 ntBASIC2.82□□□□□ -1.96
SCN11AQ9UI33 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC2.82□□□□□ -1.96
SCN11AQ9UI33 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC2.82□□□□□ -1.96
SCN11AQ9UI33 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.82□□□□□ -1.96
SCN11AQ9UI33 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
SCN11AQ9UI33 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.82□□□□□ -1.96
SCN11AQ9UI33 RFC1-217ENST00000639695 867 ntTSL 5 BASIC2.82□□□□□ -1.96
SCN11AQ9UI33 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC2.81□□□□□ -1.96
SCN11AQ9UI33 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
SCN11AQ9UI33 SEPT7P7-201ENST00000420492 1301 ntBASIC2.81□□□□□ -1.96
SCN11AQ9UI33 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.81□□□□□ -1.96
SCN11AQ9UI33 RNU1-51P-201ENST00000365345 176 ntBASIC2.81□□□□□ -1.96
SCN11AQ9UI33 U8.13-201ENST00000390842 128 ntBASIC2.81□□□□□ -1.96
SCN11AQ9UI33 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
SCN11AQ9UI33 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC2.81□□□□□ -1.96
SCN11AQ9UI33 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC2.81□□□□□ -1.96
SCN11AQ9UI33 AC010265.1-201ENST00000513509 211 ntBASIC2.81□□□□□ -1.96
SCN11AQ9UI33 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC2.81□□□□□ -1.96
SCN11AQ9UI33 OR4U1P-201ENST00000554958 912 ntBASIC2.81□□□□□ -1.96
SCN11AQ9UI33 AC090695.1-201ENST00000561269 1222 ntBASIC2.81□□□□□ -1.96
SCN11AQ9UI33 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.81□□□□□ -1.96
SCN11AQ9UI33 AC010378.1-201ENST00000619270 362 ntBASIC2.81□□□□□ -1.96
SCN11AQ9UI33 AC093909.5-201ENST00000621839 1799 ntBASIC2.81□□□□□ -1.96
SCN11AQ9UI33 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
SCN11AQ9UI33 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
SCN11AQ9UI33 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.8□□□□□ -1.96
SCN11AQ9UI33 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC2.8□□□□□ -1.96
SCN11AQ9UI33 RNU1-138P-201ENST00000384093 164 ntBASIC2.8□□□□□ -1.96
SCN11AQ9UI33 SNORA48.3-201ENST00000391081 134 ntBASIC2.8□□□□□ -1.96
SCN11AQ9UI33 SAR1AP2-201ENST00000392696 594 ntBASIC2.8□□□□□ -1.96
SCN11AQ9UI33 SAR1AP4-201ENST00000429225 591 ntBASIC2.8□□□□□ -1.96
SCN11AQ9UI33 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC2.8□□□□□ -1.96
SCN11AQ9UI33 ATG10-AS1-201ENST00000504846 648 ntBASIC2.8□□□□□ -1.96
SCN11AQ9UI33 AC108729.3-201ENST00000513484 108 ntBASIC2.8□□□□□ -1.96
SCN11AQ9UI33 RNU6-964P-201ENST00000516524 69 ntBASIC2.8□□□□□ -1.96
SCN11AQ9UI33 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC2.8□□□□□ -1.96
SCN11AQ9UI33 AF127577.6-201ENST00000623352 2191 ntBASIC2.8□□□□□ -1.96
SCN11AQ9UI33 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC2.8□□□□□ -1.96
SCN11AQ9UI33 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
SCN11AQ9UI33 Y_RNA.269-201ENST00000364685 89 ntBASIC2.79□□□□□ -1.96
SCN11AQ9UI33 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
SCN11AQ9UI33 RNU6-14P-201ENST00000384630 106 ntBASIC2.79□□□□□ -1.96
SCN11AQ9UI33 RNA5SP213-201ENST00000391031 106 ntBASIC2.79□□□□□ -1.96
SCN11AQ9UI33 AL096701.2-201ENST00000416920 238 ntBASIC2.79□□□□□ -1.96
SCN11AQ9UI33 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.79□□□□□ -1.96
SCN11AQ9UI33 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC2.79□□□□□ -1.96
SCN11AQ9UI33 TRBV26-201ENST00000456572 344 ntBASIC2.79□□□□□ -1.96
SCN11AQ9UI33 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.79□□□□□ -1.96
SCN11AQ9UI33 AP003117.2-201ENST00000606010 545 ntBASIC2.79□□□□□ -1.96
SCN11AQ9UI33 VPS8-228ENST00000628962 207 ntTSL 5 BASIC2.79□□□□□ -1.96
SCN11AQ9UI33 AC093591.3-201ENST00000634516 308 ntBASIC2.79□□□□□ -1.96
SCN11AQ9UI33 CU459211.1-201ENST00000635667 749 ntBASIC2.79□□□□□ -1.96
SCN11AQ9UI33 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.79□□□□□ -1.96
SCN11AQ9UI33 Y_RNA.466-201ENST00000384294 113 ntBASIC2.79□□□□□ -1.96
SCN11AQ9UI33 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC2.79□□□□□ -1.96
SCN11AQ9UI33 SPA17P1-201ENST00000416656 452 ntBASIC2.79□□□□□ -1.96
SCN11AQ9UI33 RBM6-203ENST00000421682 684 ntTSL 2 BASIC2.79□□□□□ -1.96
SCN11AQ9UI33 AC009414.1-201ENST00000427200 443 ntBASIC2.79□□□□□ -1.96
SCN11AQ9UI33 YWHAZP7-201ENST00000436906 631 ntBASIC2.79□□□□□ -1.96
SCN11AQ9UI33 MTCYBP31-201ENST00000438855 1122 ntBASIC2.79□□□□□ -1.96
SCN11AQ9UI33 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC2.79□□□□□ -1.96
SCN11AQ9UI33 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC2.79□□□□□ -1.96
SCN11AQ9UI33 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC2.79□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 128.4 ms