Protein–RNA interactions for Protein: Q9NWF9

RNF216, E3 ubiquitin-protein ligase RNF216, humanhuman

Predicted RBP Predictions only

Length 866 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF216Q9NWF9 RNU6-144P-201ENST00000383951 107 ntBASIC8.45□□□□□ -1.06
RNF216Q9NWF9 SNORA51.7-201ENST00000384171 134 ntBASIC8.45□□□□□ -1.06
RNF216Q9NWF9 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC8.45□□□□□ -1.06
RNF216Q9NWF9 RNU6-855P-201ENST00000410395 104 ntBASIC8.45□□□□□ -1.06
RNF216Q9NWF9 CYCSP10-201ENST00000417973 294 ntBASIC8.45□□□□□ -1.06
RNF216Q9NWF9 RPS3P2-201ENST00000421346 701 ntBASIC8.45□□□□□ -1.06
RNF216Q9NWF9 RN7SL870P-201ENST00000460111 296 ntBASIC8.45□□□□□ -1.06
RNF216Q9NWF9 AC138035.1-201ENST00000499986 992 ntTSL 5 BASIC8.45□□□□□ -1.06
RNF216Q9NWF9 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC8.45□□□□□ -1.06
RNF216Q9NWF9 AC100823.2-201ENST00000518337 699 ntBASIC8.45□□□□□ -1.06
RNF216Q9NWF9 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC8.45□□□□□ -1.06
RNF216Q9NWF9 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC8.45□□□□□ -1.06
RNF216Q9NWF9 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC8.45□□□□□ -1.06
RNF216Q9NWF9 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC8.45□□□□□ -1.06
RNF216Q9NWF9 AC140658.6-201ENST00000603958 201 ntBASIC8.45□□□□□ -1.06
RNF216Q9NWF9 pRNA.9-201ENST00000618609 89 ntBASIC8.45□□□□□ -1.06
RNF216Q9NWF9 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC8.45□□□□□ -1.06
RNF216Q9NWF9 PRDM2-201ENST00000235372 7957 ntAPPRIS P4 TSL 1 (best) BASIC8.45□□□□□ -1.06
RNF216Q9NWF9 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC8.45□□□□□ -1.06
RNF216Q9NWF9 ITSN1-206ENST00000381318 17015 ntAPPRIS P3 TSL 1 (best) BASIC8.45□□□□□ -1.06
RNF216Q9NWF9 CD163-209ENST00000541972 3590 ntAPPRIS ALT2 TSL 5 BASIC8.45□□□□□ -1.06
RNF216Q9NWF9 PHKB-201ENST00000299167 5464 ntTSL 5 BASIC8.45□□□□□ -1.06
RNF216Q9NWF9 SETDB1-205ENST00000368969 4370 ntAPPRIS P3 TSL 1 (best) BASIC8.45□□□□□ -1.06
RNF216Q9NWF9 CR1-203ENST00000367051 7469 ntTSL 5 BASIC8.45□□□□□ -1.06
RNF216Q9NWF9 CR1-204ENST00000367052 7469 ntTSL 5 BASIC8.45□□□□□ -1.06
RNF216Q9NWF9 CR1-205ENST00000367053 7469 ntTSL 5 BASIC8.45□□□□□ -1.06
RNF216Q9NWF9 LINC01204-203ENST00000609127 2900 ntTSL 2 BASIC8.45□□□□□ -1.06
RNF216Q9NWF9 OR2T33-202ENST00000641220 4118 ntAPPRIS P1 BASIC8.45□□□□□ -1.06
RNF216Q9NWF9 ABCB5-205ENST00000443026 2247 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
RNF216Q9NWF9 KAT6B-204ENST00000372724 7106 ntAPPRIS ALT2 TSL 5 BASIC8.45□□□□□ -1.06
RNF216Q9NWF9 NPHP1-203ENST00000393272 2752 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
RNF216Q9NWF9 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC8.44□□□□□ -1.06
RNF216Q9NWF9 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC8.44□□□□□ -1.06
RNF216Q9NWF9 FAM221B-203ENST00000423537 2931 ntAPPRIS P2 TSL 1 (best) BASIC8.44□□□□□ -1.06
RNF216Q9NWF9 ACSL4-204ENST00000469796 5225 ntAPPRIS P4 TSL 5 BASIC8.44□□□□□ -1.06
RNF216Q9NWF9 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC8.44□□□□□ -1.06
RNF216Q9NWF9 USP16-204ENST00000399976 2963 ntAPPRIS P3 TSL 1 (best) BASIC8.44□□□□□ -1.06
RNF216Q9NWF9 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC8.44□□□□□ -1.06
RNF216Q9NWF9 AL671511.1-201ENST00000425033 3458 ntTSL 2 BASIC8.44□□□□□ -1.06
RNF216Q9NWF9 CD96-202ENST00000352690 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC8.44□□□□□ -1.06
RNF216Q9NWF9 CATSPER2-202ENST00000381761 1758 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
RNF216Q9NWF9 RNU6-1285P-201ENST00000363480 105 ntBASIC8.44□□□□□ -1.06
RNF216Q9NWF9 RNA5SP378-201ENST00000363646 120 ntBASIC8.44□□□□□ -1.06
RNF216Q9NWF9 RNU6-1134P-201ENST00000365156 101 ntBASIC8.44□□□□□ -1.06
RNF216Q9NWF9 Y_RNA.341-201ENST00000365341 102 ntBASIC8.44□□□□□ -1.06
RNF216Q9NWF9 SNORA10B-201ENST00000384458 133 ntBASIC8.44□□□□□ -1.06
RNF216Q9NWF9 MRPS21P1-201ENST00000453850 223 ntBASIC8.44□□□□□ -1.06
RNF216Q9NWF9 AC011276.1-201ENST00000469688 323 ntBASIC8.44□□□□□ -1.06
RNF216Q9NWF9 RN7SL585P-201ENST00000470538 280 ntBASIC8.44□□□□□ -1.06
RNF216Q9NWF9 AC083906.1-201ENST00000509298 406 ntBASIC8.44□□□□□ -1.06
RNF216Q9NWF9 AC117383.2-201ENST00000514722 322 ntBASIC8.44□□□□□ -1.06
RNF216Q9NWF9 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC8.44□□□□□ -1.06
RNF216Q9NWF9 MIR3202-2-201ENST00000635980 79 ntBASIC8.44□□□□□ -1.06
RNF216Q9NWF9 SEL1L3-201ENST00000264868 4369 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
RNF216Q9NWF9 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
RNF216Q9NWF9 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC8.44□□□□□ -1.06
RNF216Q9NWF9 CTAGE11P-201ENST00000451540 2353 ntBASIC8.44□□□□□ -1.06
RNF216Q9NWF9 GLRA3-201ENST00000274093 8770 ntAPPRIS P3 TSL 1 (best) BASIC8.44□□□□□ -1.06
RNF216Q9NWF9 FAF2-201ENST00000261942 4515 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
RNF216Q9NWF9 MYOF-202ENST00000359263 6719 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
RNF216Q9NWF9 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
RNF216Q9NWF9 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
RNF216Q9NWF9 OR4D10-201ENST00000530162 2482 ntAPPRIS P1 BASIC8.44□□□□□ -1.06
RNF216Q9NWF9 USP32P2-201ENST00000412260 4329 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
RNF216Q9NWF9 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
RNF216Q9NWF9 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
RNF216Q9NWF9 A2M-201ENST00000318602 4844 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
RNF216Q9NWF9 HSDL2-201ENST00000398803 2983 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
RNF216Q9NWF9 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
RNF216Q9NWF9 CUL4B-201ENST00000336592 3109 ntTSL 5 BASIC8.43□□□□□ -1.06
RNF216Q9NWF9 AC123769.2-201ENST00000624332 5984 ntBASIC8.43□□□□□ -1.06
RNF216Q9NWF9 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
RNF216Q9NWF9 CLCC1-203ENST00000356970 4803 ntAPPRIS ALT2 TSL 5 BASIC8.43□□□□□ -1.06
RNF216Q9NWF9 HMGCS2-204ENST00000544913 1925 ntTSL 2 BASIC8.43□□□□□ -1.06
RNF216Q9NWF9 MEIS1-209ENST00000488550 5111 ntAPPRIS ALT1 TSL 1 (best) BASIC8.43□□□□□ -1.06
RNF216Q9NWF9 LINC01968-202ENST00000423318 3647 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
RNF216Q9NWF9 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC8.43□□□□□ -1.06
RNF216Q9NWF9 SNORA72-201ENST00000384339 132 ntBASIC8.43□□□□□ -1.06
RNF216Q9NWF9 IGLJ2-201ENST00000390322 175 ntAPPRIS P1 BASIC8.43□□□□□ -1.06
RNF216Q9NWF9 AL031003.1-201ENST00000404229 172 ntBASIC8.43□□□□□ -1.06
RNF216Q9NWF9 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC8.43□□□□□ -1.06
RNF216Q9NWF9 RN7SL36P-201ENST00000469345 276 ntBASIC8.43□□□□□ -1.06
RNF216Q9NWF9 AC093870.1-201ENST00000506837 213 ntBASIC8.43□□□□□ -1.06
RNF216Q9NWF9 MRPS36P2-201ENST00000512569 299 ntBASIC8.43□□□□□ -1.06
RNF216Q9NWF9 RNA5SP395-201ENST00000516567 118 ntBASIC8.43□□□□□ -1.06
RNF216Q9NWF9 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
RNF216Q9NWF9 RN7SL689P-201ENST00000577215 297 ntBASIC8.43□□□□□ -1.06
RNF216Q9NWF9 AC008385.1-201ENST00000604421 355 ntBASIC8.43□□□□□ -1.06
RNF216Q9NWF9 XPNPEP3-206ENST00000614001 230 ntTSL 5 BASIC8.43□□□□□ -1.06
RNF216Q9NWF9 AC244100.4-201ENST00000617747 388 ntBASIC8.43□□□□□ -1.06
RNF216Q9NWF9 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
RNF216Q9NWF9 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
RNF216Q9NWF9 MAGT1-201ENST00000358075 4047 ntAPPRIS P2 TSL 1 (best) BASIC8.43□□□□□ -1.06
RNF216Q9NWF9 DAZ3-201ENST00000315357 3277 ntAPPRIS ALT2 TSL 1 (best) BASIC8.43□□□□□ -1.06
RNF216Q9NWF9 DAZ2-201ENST00000382294 3277 ntAPPRIS ALT2 TSL 5 BASIC8.43□□□□□ -1.06
RNF216Q9NWF9 DAZ4-204ENST00000415508 3277 ntTSL 5 BASIC8.43□□□□□ -1.06
RNF216Q9NWF9 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC8.43□□□□□ -1.06
RNF216Q9NWF9 SYNPO2-202ENST00000429713 9920 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
RNF216Q9NWF9 AC116366.1-201ENST00000443093 3730 ntTSL 5 BASIC8.43□□□□□ -1.06
RNF216Q9NWF9 ESRP1-201ENST00000358397 3756 ntAPPRIS ALT1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 120.9 ms