Protein–RNA interactions for Protein: Q9NVW2

RLIM, E3 ubiquitin-protein ligase RLIM, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RLIMQ9NVW2 AL391684.1-202ENST00000641293 1636 ntBASIC4.27□□□□□ -1.73
RLIMQ9NVW2 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
RLIMQ9NVW2 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.27□□□□□ -1.73
RLIMQ9NVW2 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
RLIMQ9NVW2 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
RLIMQ9NVW2 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
RLIMQ9NVW2 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
RLIMQ9NVW2 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
RLIMQ9NVW2 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
RLIMQ9NVW2 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
RLIMQ9NVW2 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.26□□□□□ -1.73
RLIMQ9NVW2 NMD3P1-201ENST00000439704 1488 ntBASIC4.26□□□□□ -1.73
RLIMQ9NVW2 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
RLIMQ9NVW2 RNU1-94P-201ENST00000362627 173 ntBASIC4.26□□□□□ -1.73
RLIMQ9NVW2 SNORA74A-201ENST00000364089 198 ntBASIC4.26□□□□□ -1.73
RLIMQ9NVW2 RNU2-62P-201ENST00000410868 191 ntBASIC4.26□□□□□ -1.73
RLIMQ9NVW2 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
RLIMQ9NVW2 AMD1P2-201ENST00000412936 992 ntBASIC4.26□□□□□ -1.73
RLIMQ9NVW2 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC4.26□□□□□ -1.73
RLIMQ9NVW2 AC140479.3-201ENST00000418944 1126 ntBASIC4.26□□□□□ -1.73
RLIMQ9NVW2 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.26□□□□□ -1.73
RLIMQ9NVW2 OR1AA1P-201ENST00000419597 916 ntBASIC4.26□□□□□ -1.73
RLIMQ9NVW2 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC4.26□□□□□ -1.73
RLIMQ9NVW2 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC4.26□□□□□ -1.73
RLIMQ9NVW2 AC005154.2-201ENST00000438110 379 ntBASIC4.26□□□□□ -1.73
RLIMQ9NVW2 AC093156.1-201ENST00000440382 670 ntBASIC4.26□□□□□ -1.73
RLIMQ9NVW2 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC4.26□□□□□ -1.73
RLIMQ9NVW2 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC4.26□□□□□ -1.73
RLIMQ9NVW2 NANOGP10-201ENST00000453325 895 ntBASIC4.26□□□□□ -1.73
RLIMQ9NVW2 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.26□□□□□ -1.73
RLIMQ9NVW2 snoU109.4-201ENST00000458953 143 ntBASIC4.26□□□□□ -1.73
RLIMQ9NVW2 AL049714.1-201ENST00000466686 347 ntBASIC4.26□□□□□ -1.73
RLIMQ9NVW2 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
RLIMQ9NVW2 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC4.26□□□□□ -1.73
RLIMQ9NVW2 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.26□□□□□ -1.73
RLIMQ9NVW2 STMN1P2-201ENST00000508435 439 ntBASIC4.26□□□□□ -1.73
RLIMQ9NVW2 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC4.26□□□□□ -1.73
RLIMQ9NVW2 AC074344.1-201ENST00000512823 224 ntBASIC4.26□□□□□ -1.73
RLIMQ9NVW2 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.26□□□□□ -1.73
RLIMQ9NVW2 SCARNA24.1-201ENST00000516465 137 ntBASIC4.26□□□□□ -1.73
RLIMQ9NVW2 HMGB1P19-201ENST00000517578 577 ntBASIC4.26□□□□□ -1.73
RLIMQ9NVW2 AC134698.5-201ENST00000519444 336 ntBASIC4.26□□□□□ -1.73
RLIMQ9NVW2 IGLV3-26-201ENST00000520756 302 ntBASIC4.26□□□□□ -1.73
RLIMQ9NVW2 AC118273.2-201ENST00000532092 465 ntBASIC4.26□□□□□ -1.73
RLIMQ9NVW2 AL512310.1-201ENST00000548639 172 ntBASIC4.26□□□□□ -1.73
RLIMQ9NVW2 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC4.26□□□□□ -1.73
RLIMQ9NVW2 EDDM3DP-201ENST00000554692 434 ntBASIC4.26□□□□□ -1.73
RLIMQ9NVW2 AC034105.3-201ENST00000565294 442 ntBASIC4.26□□□□□ -1.73
RLIMQ9NVW2 OR1F2P-201ENST00000570470 933 ntBASIC4.26□□□□□ -1.73
RLIMQ9NVW2 HNRNPCP4-201ENST00000571636 900 ntBASIC4.26□□□□□ -1.73
RLIMQ9NVW2 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC4.26□□□□□ -1.73
RLIMQ9NVW2 OR4K8P-201ENST00000578842 1048 ntBASIC4.26□□□□□ -1.73
RLIMQ9NVW2 AC098848.2-201ENST00000588023 330 ntBASIC4.26□□□□□ -1.73
RLIMQ9NVW2 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC4.26□□□□□ -1.73
RLIMQ9NVW2 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC4.26□□□□□ -1.73
RLIMQ9NVW2 BNIP3P30-201ENST00000601184 574 ntBASIC4.26□□□□□ -1.73
RLIMQ9NVW2 RPL26P30-202ENST00000602923 645 ntBASIC4.26□□□□□ -1.73
RLIMQ9NVW2 AL512782.1-201ENST00000603093 364 ntBASIC4.26□□□□□ -1.73
RLIMQ9NVW2 IGKV1OR2-118-201ENST00000603238 347 ntBASIC4.26□□□□□ -1.73
RLIMQ9NVW2 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC4.26□□□□□ -1.73
RLIMQ9NVW2 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.26□□□□□ -1.73
RLIMQ9NVW2 MIR1321-201ENST00000637766 79 ntBASIC4.26□□□□□ -1.73
RLIMQ9NVW2 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC4.26□□□□□ -1.73
RLIMQ9NVW2 DHX40P1-201ENST00000588725 1412 ntBASIC4.26□□□□□ -1.73
RLIMQ9NVW2 MTCO1P24-201ENST00000515438 1558 ntBASIC4.26□□□□□ -1.73
RLIMQ9NVW2 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
RLIMQ9NVW2 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
RLIMQ9NVW2 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.26□□□□□ -1.73
RLIMQ9NVW2 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
RLIMQ9NVW2 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
RLIMQ9NVW2 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.26□□□□□ -1.73
RLIMQ9NVW2 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.26□□□□□ -1.73
RLIMQ9NVW2 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
RLIMQ9NVW2 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC4.26□□□□□ -1.73
RLIMQ9NVW2 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
RLIMQ9NVW2 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC4.26□□□□□ -1.73
RLIMQ9NVW2 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
RLIMQ9NVW2 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
RLIMQ9NVW2 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
RLIMQ9NVW2 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.25□□□□□ -1.73
RLIMQ9NVW2 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
RLIMQ9NVW2 ZFRP1-201ENST00000457579 2970 ntBASIC4.25□□□□□ -1.73
RLIMQ9NVW2 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.25□□□□□ -1.73
RLIMQ9NVW2 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
RLIMQ9NVW2 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC4.25□□□□□ -1.73
RLIMQ9NVW2 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
RLIMQ9NVW2 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC4.25□□□□□ -1.73
RLIMQ9NVW2 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC4.25□□□□□ -1.73
RLIMQ9NVW2 MIR1-2-201ENST00000384961 85 ntBASIC4.25□□□□□ -1.73
RLIMQ9NVW2 RN7SKP285-201ENST00000410137 318 ntBASIC4.25□□□□□ -1.73
RLIMQ9NVW2 RN7SKP100-201ENST00000411258 284 ntBASIC4.25□□□□□ -1.73
RLIMQ9NVW2 RNU6-516P-201ENST00000411381 104 ntBASIC4.25□□□□□ -1.73
RLIMQ9NVW2 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC4.25□□□□□ -1.73
RLIMQ9NVW2 AL807761.1-201ENST00000417622 171 ntBASIC4.25□□□□□ -1.73
RLIMQ9NVW2 PDSS1P1-201ENST00000422953 1114 ntBASIC4.25□□□□□ -1.73
RLIMQ9NVW2 AC010655.1-201ENST00000449336 292 ntBASIC4.25□□□□□ -1.73
RLIMQ9NVW2 AC140076.1-201ENST00000449897 361 ntBASIC4.25□□□□□ -1.73
RLIMQ9NVW2 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC4.25□□□□□ -1.73
RLIMQ9NVW2 RNU6-420P-201ENST00000458780 107 ntBASIC4.25□□□□□ -1.73
RLIMQ9NVW2 RPL36AP41-201ENST00000493820 306 ntBASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 132.1 ms