Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 AC080013.4-201ENST00000607624 649 ntBASIC4.29□□□□□ -1.72
USP29Q9HBJ7 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC4.29□□□□□ -1.72
USP29Q9HBJ7 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC4.29□□□□□ -1.72
USP29Q9HBJ7 RNA5SP196-201ENST00000625967 102 ntBASIC4.29□□□□□ -1.72
USP29Q9HBJ7 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.29□□□□□ -1.72
USP29Q9HBJ7 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.29□□□□□ -1.72
USP29Q9HBJ7 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
USP29Q9HBJ7 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.29□□□□□ -1.72
USP29Q9HBJ7 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.29□□□□□ -1.72
USP29Q9HBJ7 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
USP29Q9HBJ7 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.28□□□□□ -1.72
USP29Q9HBJ7 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
USP29Q9HBJ7 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
USP29Q9HBJ7 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC4.28□□□□□ -1.72
USP29Q9HBJ7 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.28□□□□□ -1.72
USP29Q9HBJ7 DCAF13P1-201ENST00000495256 1330 ntBASIC4.28□□□□□ -1.72
USP29Q9HBJ7 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
USP29Q9HBJ7 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
USP29Q9HBJ7 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
USP29Q9HBJ7 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
USP29Q9HBJ7 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
USP29Q9HBJ7 RNU6-259P-201ENST00000383999 107 ntBASIC4.28□□□□□ -1.72
USP29Q9HBJ7 Y_RNA.598-201ENST00000410480 95 ntBASIC4.28□□□□□ -1.72
USP29Q9HBJ7 FCF1P9-201ENST00000412546 282 ntBASIC4.28□□□□□ -1.72
USP29Q9HBJ7 PGBD4P3-201ENST00000440731 581 ntBASIC4.28□□□□□ -1.72
USP29Q9HBJ7 AC244505.5-201ENST00000443639 207 ntBASIC4.28□□□□□ -1.72
USP29Q9HBJ7 USP9YP12-201ENST00000450481 570 ntBASIC4.28□□□□□ -1.72
USP29Q9HBJ7 HMGB3P22-202ENST00000451823 572 ntBASIC4.28□□□□□ -1.72
USP29Q9HBJ7 AC091153.1-201ENST00000466297 402 ntBASIC4.28□□□□□ -1.72
USP29Q9HBJ7 PABPC1P3-201ENST00000469174 459 ntBASIC4.28□□□□□ -1.72
USP29Q9HBJ7 HMGB1P36-201ENST00000487709 576 ntBASIC4.28□□□□□ -1.72
USP29Q9HBJ7 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC4.28□□□□□ -1.72
USP29Q9HBJ7 SLC25A15P5-201ENST00000508033 253 ntBASIC4.28□□□□□ -1.72
USP29Q9HBJ7 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC4.28□□□□□ -1.72
USP29Q9HBJ7 AC024589.1-201ENST00000512207 263 ntBASIC4.28□□□□□ -1.72
USP29Q9HBJ7 AC034159.1-201ENST00000513885 583 ntBASIC4.28□□□□□ -1.72
USP29Q9HBJ7 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC4.28□□□□□ -1.72
USP29Q9HBJ7 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC4.28□□□□□ -1.72
USP29Q9HBJ7 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC4.28□□□□□ -1.72
USP29Q9HBJ7 AC022878.1-201ENST00000530684 149 ntBASIC4.28□□□□□ -1.72
USP29Q9HBJ7 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC4.28□□□□□ -1.72
USP29Q9HBJ7 AP002453.2-201ENST00000533503 320 ntBASIC4.28□□□□□ -1.72
USP29Q9HBJ7 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.28□□□□□ -1.72
USP29Q9HBJ7 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC4.28□□□□□ -1.72
USP29Q9HBJ7 HMGB3P26-201ENST00000560051 582 ntBASIC4.28□□□□□ -1.72
USP29Q9HBJ7 AC106785.1-201ENST00000565935 262 ntBASIC4.28□□□□□ -1.72
USP29Q9HBJ7 AL360157.1-201ENST00000565962 87 ntBASIC4.28□□□□□ -1.72
USP29Q9HBJ7 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC4.28□□□□□ -1.72
USP29Q9HBJ7 BNIP3P33-201ENST00000598912 569 ntBASIC4.28□□□□□ -1.72
USP29Q9HBJ7 ACTR3BP1-201ENST00000605584 1247 ntBASIC4.28□□□□□ -1.72
USP29Q9HBJ7 AC098614.4-201ENST00000607601 462 ntBASIC4.28□□□□□ -1.72
USP29Q9HBJ7 AC138749.5-201ENST00000611461 208 ntBASIC4.28□□□□□ -1.72
USP29Q9HBJ7 AC116165.2-201ENST00000616705 206 ntBASIC4.28□□□□□ -1.72
USP29Q9HBJ7 AC233309.1-201ENST00000619522 751 ntBASIC4.28□□□□□ -1.72
USP29Q9HBJ7 AC099654.12-201ENST00000639868 649 ntBASIC4.28□□□□□ -1.72
USP29Q9HBJ7 ZNF962P-201ENST00000443465 3140 ntBASIC4.28□□□□□ -1.72
USP29Q9HBJ7 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC4.28□□□□□ -1.72
USP29Q9HBJ7 AC027287.1-201ENST00000553115 1453 ntBASIC4.28□□□□□ -1.72
USP29Q9HBJ7 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
USP29Q9HBJ7 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.28□□□□□ -1.72
USP29Q9HBJ7 AC007390.2-201ENST00000606229 3803 ntBASIC4.28□□□□□ -1.72
USP29Q9HBJ7 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.28□□□□□ -1.72
USP29Q9HBJ7 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
USP29Q9HBJ7 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.27□□□□□ -1.73
USP29Q9HBJ7 AL122126.1-201ENST00000546905 1318 ntBASIC4.27□□□□□ -1.73
USP29Q9HBJ7 OR11H5P-202ENST00000641612 1325 ntBASIC4.27□□□□□ -1.73
USP29Q9HBJ7 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
USP29Q9HBJ7 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
USP29Q9HBJ7 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.27□□□□□ -1.73
USP29Q9HBJ7 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC4.27□□□□□ -1.73
USP29Q9HBJ7 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
USP29Q9HBJ7 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
USP29Q9HBJ7 RNU6-1042P-201ENST00000384204 107 ntBASIC4.27□□□□□ -1.73
USP29Q9HBJ7 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
USP29Q9HBJ7 SNORA48.7-201ENST00000391302 135 ntBASIC4.27□□□□□ -1.73
USP29Q9HBJ7 RNU6-628P-201ENST00000410675 107 ntBASIC4.27□□□□□ -1.73
USP29Q9HBJ7 RNA5SP306-201ENST00000411087 107 ntBASIC4.27□□□□□ -1.73
USP29Q9HBJ7 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.27□□□□□ -1.73
USP29Q9HBJ7 AIMP1P1-201ENST00000418670 937 ntBASIC4.27□□□□□ -1.73
USP29Q9HBJ7 Z97055.1-201ENST00000419730 712 ntBASIC4.27□□□□□ -1.73
USP29Q9HBJ7 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.27□□□□□ -1.73
USP29Q9HBJ7 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC4.27□□□□□ -1.73
USP29Q9HBJ7 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.27□□□□□ -1.73
USP29Q9HBJ7 AC122718.1-201ENST00000439448 744 ntBASIC4.27□□□□□ -1.73
USP29Q9HBJ7 MTCO2P3-201ENST00000442543 421 ntBASIC4.27□□□□□ -1.73
USP29Q9HBJ7 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC4.27□□□□□ -1.73
USP29Q9HBJ7 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.27□□□□□ -1.73
USP29Q9HBJ7 AC002381.1-201ENST00000447049 280 ntBASIC4.27□□□□□ -1.73
USP29Q9HBJ7 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC4.27□□□□□ -1.73
USP29Q9HBJ7 NANOGNBP1-201ENST00000448444 480 ntBASIC4.27□□□□□ -1.73
USP29Q9HBJ7 PDSS1P2-201ENST00000449397 678 ntBASIC4.27□□□□□ -1.73
USP29Q9HBJ7 AC093392.2-201ENST00000450682 337 ntBASIC4.27□□□□□ -1.73
USP29Q9HBJ7 AL033528.1-201ENST00000453780 140 ntBASIC4.27□□□□□ -1.73
USP29Q9HBJ7 FAM133DP-201ENST00000464802 691 ntBASIC4.27□□□□□ -1.73
USP29Q9HBJ7 FPGT-203ENST00000467578 601 ntTSL 2 BASIC4.27□□□□□ -1.73
USP29Q9HBJ7 AC023424.2-201ENST00000493479 777 ntBASIC4.27□□□□□ -1.73
USP29Q9HBJ7 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.27□□□□□ -1.73
USP29Q9HBJ7 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
USP29Q9HBJ7 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC4.27□□□□□ -1.73
USP29Q9HBJ7 RN7SKP298-201ENST00000515950 94 ntBASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms