Protein–RNA interactions for Protein: Q9H7N4

SCAF1, Splicing factor, arginine/serine-rich 19, humanhuman

Known RBP Predictions only

Length 1,312 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1Q9H7N4 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC9.95□□□□□ -0.82
SCAF1Q9H7N4 AC005225.5-201ENST00000623547 2225 ntBASIC9.95□□□□□ -0.82
SCAF1Q9H7N4 GRIA4-212ENST00000530497 5059 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
SCAF1Q9H7N4 ZNF816-203ENST00000357666 2697 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
SCAF1Q9H7N4 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC9.95□□□□□ -0.82
SCAF1Q9H7N4 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
SCAF1Q9H7N4 RNF213-220ENST00000582970 21055 ntAPPRIS P2 TSL 1 (best) BASIC9.95□□□□□ -0.82
SCAF1Q9H7N4 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
SCAF1Q9H7N4 USP45-204ENST00000369233 2514 ntTSL 5 BASIC9.95□□□□□ -0.82
SCAF1Q9H7N4 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC9.95□□□□□ -0.82
SCAF1Q9H7N4 NEMP2-202ENST00000409150 6168 ntAPPRIS P1 TSL 2 BASIC9.95□□□□□ -0.82
SCAF1Q9H7N4 RNU6-36P-201ENST00000384172 107 ntBASIC9.95□□□□□ -0.82
SCAF1Q9H7N4 RNU6-16P-201ENST00000384385 107 ntBASIC9.95□□□□□ -0.82
SCAF1Q9H7N4 RNU6-843P-201ENST00000384454 104 ntBASIC9.95□□□□□ -0.82
SCAF1Q9H7N4 RNU6-15P-201ENST00000384534 107 ntBASIC9.95□□□□□ -0.82
SCAF1Q9H7N4 RPL26P26-201ENST00000480251 434 ntBASIC9.95□□□□□ -0.82
SCAF1Q9H7N4 OR1F2P-201ENST00000570470 933 ntBASIC9.95□□□□□ -0.82
SCAF1Q9H7N4 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC9.95□□□□□ -0.82
SCAF1Q9H7N4 RPL23AP87-202ENST00000573039 466 ntBASIC9.95□□□□□ -0.82
SCAF1Q9H7N4 AC104581.3-201ENST00000573621 348 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
SCAF1Q9H7N4 AC008752.2-201ENST00000591174 750 ntTSL 3 BASIC9.95□□□□□ -0.82
SCAF1Q9H7N4 U7.2-201ENST00000607576 63 ntBASIC9.95□□□□□ -0.82
SCAF1Q9H7N4 MIR6768-201ENST00000610734 72 ntBASIC9.95□□□□□ -0.82
SCAF1Q9H7N4 AP001340.1-201ENST00000624405 217 ntBASIC9.95□□□□□ -0.82
SCAF1Q9H7N4 ZNF204P-201ENST00000416749 2397 ntBASIC9.95□□□□□ -0.82
SCAF1Q9H7N4 CTNND1-233ENST00000532787 5751 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
SCAF1Q9H7N4 RPGRIP1L-202ENST00000379925 5297 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
SCAF1Q9H7N4 PSEN1-201ENST00000324501 6078 ntAPPRIS P4 TSL 1 (best) BASIC9.95□□□□□ -0.82
SCAF1Q9H7N4 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
SCAF1Q9H7N4 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
SCAF1Q9H7N4 RBM25-201ENST00000261973 6910 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
SCAF1Q9H7N4 SLC26A7-202ENST00000309536 2656 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
SCAF1Q9H7N4 TRPM6-204ENST00000449912 8244 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
SCAF1Q9H7N4 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
SCAF1Q9H7N4 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
SCAF1Q9H7N4 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
SCAF1Q9H7N4 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC9.94□□□□□ -0.82
SCAF1Q9H7N4 ZNF507-203ENST00000544431 5764 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
SCAF1Q9H7N4 RNA5SP472-201ENST00000363868 119 ntBASIC9.94□□□□□ -0.82
SCAF1Q9H7N4 RNU6-1179P-201ENST00000384667 107 ntBASIC9.94□□□□□ -0.82
SCAF1Q9H7N4 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC9.94□□□□□ -0.82
SCAF1Q9H7N4 OR2A2-201ENST00000408979 1051 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
SCAF1Q9H7N4 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC9.94□□□□□ -0.82
SCAF1Q9H7N4 RPS3P2-201ENST00000421346 701 ntBASIC9.94□□□□□ -0.82
SCAF1Q9H7N4 RPS20P1-201ENST00000434853 354 ntBASIC9.94□□□□□ -0.82
SCAF1Q9H7N4 RPS15AP5-201ENST00000436276 388 ntBASIC9.94□□□□□ -0.82
SCAF1Q9H7N4 AC010655.1-201ENST00000449336 292 ntBASIC9.94□□□□□ -0.82
SCAF1Q9H7N4 AC053481.1-201ENST00000467217 306 ntBASIC9.94□□□□□ -0.82
SCAF1Q9H7N4 RN7SKP11-201ENST00000517018 287 ntBASIC9.94□□□□□ -0.82
SCAF1Q9H7N4 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC9.94□□□□□ -0.82
SCAF1Q9H7N4 RN7SL802P-201ENST00000577858 299 ntBASIC9.94□□□□□ -0.82
SCAF1Q9H7N4 RN7SL667P-201ENST00000582817 298 ntBASIC9.94□□□□□ -0.82
SCAF1Q9H7N4 EFCAB8-204ENST00000618684 435 ntTSL 5 BASIC9.94□□□□□ -0.82
SCAF1Q9H7N4 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
SCAF1Q9H7N4 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC9.94□□□□□ -0.82
SCAF1Q9H7N4 AC010401.2-201ENST00000575137 4934 ntBASIC9.94□□□□□ -0.82
SCAF1Q9H7N4 BABAM2-203ENST00000361704 1686 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
SCAF1Q9H7N4 RBM23-203ENST00000359890 10040 ntAPPRIS P4 TSL 1 (best) BASIC9.94□□□□□ -0.82
SCAF1Q9H7N4 METTL8-217ENST00000612742 8132 ntAPPRIS P1 TSL 2 BASIC9.94□□□□□ -0.82
SCAF1Q9H7N4 EZH1-222ENST00000592743 2501 ntAPPRIS P1 TSL 2 BASIC9.94□□□□□ -0.82
SCAF1Q9H7N4 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC9.94□□□□□ -0.82
SCAF1Q9H7N4 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
SCAF1Q9H7N4 STS-201ENST00000217961 6521 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
SCAF1Q9H7N4 APOOL-202ENST00000613473 6445 ntAPPRIS ALT1 TSL 5 BASIC9.93□□□□□ -0.82
SCAF1Q9H7N4 AL031119.1-201ENST00000404707 1879 ntBASIC9.93□□□□□ -0.82
SCAF1Q9H7N4 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
SCAF1Q9H7N4 UG0898H09-202ENST00000623646 7040 ntBASIC9.93□□□□□ -0.82
SCAF1Q9H7N4 JPX-212ENST00000639185 9658 ntTSL 5 BASIC9.93□□□□□ -0.82
SCAF1Q9H7N4 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
SCAF1Q9H7N4 RNU6-235P-201ENST00000362644 107 ntBASIC9.93□□□□□ -0.82
SCAF1Q9H7N4 Y_RNA.337-201ENST00000365312 102 ntBASIC9.93□□□□□ -0.82
SCAF1Q9H7N4 AL096701.2-201ENST00000416920 238 ntBASIC9.93□□□□□ -0.82
SCAF1Q9H7N4 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC9.93□□□□□ -0.82
SCAF1Q9H7N4 RPL7AP14-201ENST00000424041 802 ntBASIC9.93□□□□□ -0.82
SCAF1Q9H7N4 BTF3P11-201ENST00000426582 477 ntBASIC9.93□□□□□ -0.82
SCAF1Q9H7N4 AL031737.1-201ENST00000450125 223 ntBASIC9.93□□□□□ -0.82
SCAF1Q9H7N4 TEX41-209ENST00000451478 452 ntTSL 2 BASIC9.93□□□□□ -0.82
SCAF1Q9H7N4 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC9.93□□□□□ -0.82
SCAF1Q9H7N4 AL133445.1-201ENST00000467051 452 ntBASIC9.93□□□□□ -0.82
SCAF1Q9H7N4 DUTP1-201ENST00000493631 470 ntBASIC9.93□□□□□ -0.82
SCAF1Q9H7N4 RN7SL284P-201ENST00000498823 275 ntBASIC9.93□□□□□ -0.82
SCAF1Q9H7N4 SNRPCP2-201ENST00000504370 475 ntBASIC9.93□□□□□ -0.82
SCAF1Q9H7N4 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC9.93□□□□□ -0.82
SCAF1Q9H7N4 LIMCH1-201ENST00000313860 6165 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
SCAF1Q9H7N4 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC9.93□□□□□ -0.82
SCAF1Q9H7N4 AC006116.1-201ENST00000587908 2171 ntBASIC9.93□□□□□ -0.82
SCAF1Q9H7N4 RRS1-AS1-201ENST00000499642 4366 ntTSL 2 BASIC9.93□□□□□ -0.82
SCAF1Q9H7N4 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC9.93□□□□□ -0.82
SCAF1Q9H7N4 VTA1-202ENST00000367630 7028 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
SCAF1Q9H7N4 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
SCAF1Q9H7N4 TNPO1P2-201ENST00000426249 2665 ntBASIC9.93□□□□□ -0.82
SCAF1Q9H7N4 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
SCAF1Q9H7N4 CARD8-202ENST00000391898 5263 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
SCAF1Q9H7N4 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
SCAF1Q9H7N4 LINC02249-202ENST00000562624 4260 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
SCAF1Q9H7N4 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
SCAF1Q9H7N4 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
SCAF1Q9H7N4 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC9.92□□□□□ -0.82
SCAF1Q9H7N4 P3H2-203ENST00000427335 2963 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
SCAF1Q9H7N4 ARCN1-201ENST00000264028 3845 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Retrieved 100 of 98,524 protein–RNA pairs in 117.5 ms