Protein–RNA interactions for Protein: Q9C0D0

PHACTR1, Phosphatase and actin regulator 1, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR1Q9C0D0 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC5.75□□□□□ -1.49
PHACTR1Q9C0D0 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.75□□□□□ -1.49
PHACTR1Q9C0D0 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC5.75□□□□□ -1.49
PHACTR1Q9C0D0 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC5.75□□□□□ -1.49
PHACTR1Q9C0D0 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
PHACTR1Q9C0D0 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
PHACTR1Q9C0D0 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.74□□□□□ -1.49
PHACTR1Q9C0D0 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
PHACTR1Q9C0D0 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
PHACTR1Q9C0D0 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.74□□□□□ -1.49
PHACTR1Q9C0D0 AC026523.2-201ENST00000625039 7739 ntBASIC5.74□□□□□ -1.49
PHACTR1Q9C0D0 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.74□□□□□ -1.49
PHACTR1Q9C0D0 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
PHACTR1Q9C0D0 RNA5SP500-201ENST00000364486 119 ntBASIC5.74□□□□□ -1.49
PHACTR1Q9C0D0 RNA5SP30-201ENST00000365552 115 ntBASIC5.74□□□□□ -1.49
PHACTR1Q9C0D0 SNORD51-201ENST00000384320 80 ntBASIC5.74□□□□□ -1.49
PHACTR1Q9C0D0 Y_RNA.489-201ENST00000384410 101 ntBASIC5.74□□□□□ -1.49
PHACTR1Q9C0D0 SNORA16.2-201ENST00000390991 127 ntBASIC5.74□□□□□ -1.49
PHACTR1Q9C0D0 RNU6-1109P-201ENST00000391187 107 ntBASIC5.74□□□□□ -1.49
PHACTR1Q9C0D0 PLA2G12AP2-201ENST00000424744 264 ntBASIC5.74□□□□□ -1.49
PHACTR1Q9C0D0 CYCSP12-201ENST00000437729 300 ntBASIC5.74□□□□□ -1.49
PHACTR1Q9C0D0 HIGD1AP11-201ENST00000438361 280 ntBASIC5.74□□□□□ -1.49
PHACTR1Q9C0D0 ATP6V1E1P1-201ENST00000439215 681 ntBASIC5.74□□□□□ -1.49
PHACTR1Q9C0D0 AC009963.3-201ENST00000458090 486 ntBASIC5.74□□□□□ -1.49
PHACTR1Q9C0D0 RNU7-167P-201ENST00000459160 62 ntBASIC5.74□□□□□ -1.49
PHACTR1Q9C0D0 AC010350.1-201ENST00000504908 231 ntBASIC5.74□□□□□ -1.49
PHACTR1Q9C0D0 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC5.74□□□□□ -1.49
PHACTR1Q9C0D0 IGKV3D-25-201ENST00000519599 235 ntBASIC5.74□□□□□ -1.49
PHACTR1Q9C0D0 AP003396.4-201ENST00000527574 265 ntBASIC5.74□□□□□ -1.49
PHACTR1Q9C0D0 AP000827.1-201ENST00000527814 258 ntBASIC5.74□□□□□ -1.49
PHACTR1Q9C0D0 HMGN2P36-201ENST00000529541 409 ntBASIC5.74□□□□□ -1.49
PHACTR1Q9C0D0 APAF1-207ENST00000547743 651 ntTSL 3 BASIC5.74□□□□□ -1.49
PHACTR1Q9C0D0 AC018552.1-201ENST00000562099 811 ntBASIC5.74□□□□□ -1.49
PHACTR1Q9C0D0 AC092266.1-201ENST00000610958 165 ntBASIC5.74□□□□□ -1.49
PHACTR1Q9C0D0 MIR6778-201ENST00000617912 73 ntBASIC5.74□□□□□ -1.49
PHACTR1Q9C0D0 U2.1-201ENST00000618978 145 ntBASIC5.74□□□□□ -1.49
PHACTR1Q9C0D0 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
PHACTR1Q9C0D0 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
PHACTR1Q9C0D0 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
PHACTR1Q9C0D0 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
PHACTR1Q9C0D0 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
PHACTR1Q9C0D0 AC008758.3-201ENST00000507003 1829 ntBASIC5.74□□□□□ -1.49
PHACTR1Q9C0D0 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
PHACTR1Q9C0D0 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
PHACTR1Q9C0D0 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
PHACTR1Q9C0D0 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
PHACTR1Q9C0D0 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
PHACTR1Q9C0D0 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
PHACTR1Q9C0D0 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
PHACTR1Q9C0D0 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
PHACTR1Q9C0D0 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
PHACTR1Q9C0D0 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.73□□□□□ -1.49
PHACTR1Q9C0D0 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
PHACTR1Q9C0D0 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
PHACTR1Q9C0D0 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
PHACTR1Q9C0D0 Y_RNA.473-201ENST00000384333 102 ntBASIC5.73□□□□□ -1.49
PHACTR1Q9C0D0 Y_RNA.493-201ENST00000384422 102 ntBASIC5.73□□□□□ -1.49
PHACTR1Q9C0D0 AL445189.1-201ENST00000405722 338 ntBASIC5.73□□□□□ -1.49
PHACTR1Q9C0D0 AL590632.1-201ENST00000424289 371 ntBASIC5.73□□□□□ -1.49
PHACTR1Q9C0D0 FAR2P4-202ENST00000425399 584 ntBASIC5.73□□□□□ -1.49
PHACTR1Q9C0D0 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC5.73□□□□□ -1.49
PHACTR1Q9C0D0 AL360081.1-201ENST00000428299 555 ntBASIC5.73□□□□□ -1.49
PHACTR1Q9C0D0 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC5.73□□□□□ -1.49
PHACTR1Q9C0D0 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC5.73□□□□□ -1.49
PHACTR1Q9C0D0 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC5.73□□□□□ -1.49
PHACTR1Q9C0D0 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC5.73□□□□□ -1.49
PHACTR1Q9C0D0 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC5.73□□□□□ -1.49
PHACTR1Q9C0D0 CEACAMP4-201ENST00000457676 421 ntBASIC5.73□□□□□ -1.49
PHACTR1Q9C0D0 AC098847.1-201ENST00000473094 348 ntBASIC5.73□□□□□ -1.49
PHACTR1Q9C0D0 RN7SL170P-201ENST00000487098 295 ntBASIC5.73□□□□□ -1.49
PHACTR1Q9C0D0 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC5.73□□□□□ -1.49
PHACTR1Q9C0D0 RNU6-1332P-201ENST00000516666 104 ntBASIC5.73□□□□□ -1.49
PHACTR1Q9C0D0 SETP7-201ENST00000552169 453 ntBASIC5.73□□□□□ -1.49
PHACTR1Q9C0D0 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.73□□□□□ -1.49
PHACTR1Q9C0D0 AC124916.2-201ENST00000604416 224 ntBASIC5.73□□□□□ -1.49
PHACTR1Q9C0D0 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC5.73□□□□□ -1.49
PHACTR1Q9C0D0 AC073593.1-201ENST00000624500 411 ntBASIC5.73□□□□□ -1.49
PHACTR1Q9C0D0 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC5.73□□□□□ -1.49
PHACTR1Q9C0D0 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC5.73□□□□□ -1.49
PHACTR1Q9C0D0 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.73□□□□□ -1.49
PHACTR1Q9C0D0 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
PHACTR1Q9C0D0 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
PHACTR1Q9C0D0 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
PHACTR1Q9C0D0 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
PHACTR1Q9C0D0 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
PHACTR1Q9C0D0 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
PHACTR1Q9C0D0 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
PHACTR1Q9C0D0 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
PHACTR1Q9C0D0 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
PHACTR1Q9C0D0 AC116667.1-201ENST00000604855 2072 ntBASIC5.72□□□□□ -1.49
PHACTR1Q9C0D0 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.72□□□□□ -1.49
PHACTR1Q9C0D0 RNU1-65P-201ENST00000363919 148 ntBASIC5.72□□□□□ -1.49
PHACTR1Q9C0D0 RNU6-946P-201ENST00000383878 107 ntBASIC5.72□□□□□ -1.49
PHACTR1Q9C0D0 RNU6-637P-201ENST00000384050 107 ntBASIC5.72□□□□□ -1.49
PHACTR1Q9C0D0 RNU6-393P-201ENST00000384475 107 ntBASIC5.72□□□□□ -1.49
PHACTR1Q9C0D0 MIR130B-202ENST00000385018 82 ntBASIC5.72□□□□□ -1.49
PHACTR1Q9C0D0 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
PHACTR1Q9C0D0 RNU6-101P-201ENST00000410323 104 ntBASIC5.72□□□□□ -1.49
PHACTR1Q9C0D0 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
PHACTR1Q9C0D0 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 122 ms