Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 SNORA24.1-201ENST00000384401 135 ntBASIC5.74□□□□□ -1.49
CNTNAP3Q9BZ76 RN7SKP51-201ENST00000410781 304 ntBASIC5.74□□□□□ -1.49
CNTNAP3Q9BZ76 AC009237.10-201ENST00000414112 510 ntBASIC5.74□□□□□ -1.49
CNTNAP3Q9BZ76 BMS1P22-201ENST00000414726 313 ntBASIC5.74□□□□□ -1.49
CNTNAP3Q9BZ76 AC114491.1-201ENST00000416095 246 ntBASIC5.74□□□□□ -1.49
CNTNAP3Q9BZ76 RHOT1P3-201ENST00000436571 331 ntBASIC5.74□□□□□ -1.49
CNTNAP3Q9BZ76 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC5.74□□□□□ -1.49
CNTNAP3Q9BZ76 FTH1P1-201ENST00000437933 532 ntBASIC5.74□□□□□ -1.49
CNTNAP3Q9BZ76 PPIAP10-201ENST00000438675 458 ntBASIC5.74□□□□□ -1.49
CNTNAP3Q9BZ76 AL031274.1-201ENST00000450334 232 ntBASIC5.74□□□□□ -1.49
CNTNAP3Q9BZ76 AC087884.1-201ENST00000469738 328 ntBASIC5.74□□□□□ -1.49
CNTNAP3Q9BZ76 AC117503.1-201ENST00000472241 394 ntBASIC5.74□□□□□ -1.49
CNTNAP3Q9BZ76 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC5.74□□□□□ -1.49
CNTNAP3Q9BZ76 AC110792.1-201ENST00000491826 472 ntBASIC5.74□□□□□ -1.49
CNTNAP3Q9BZ76 RN7SL57P-201ENST00000493687 290 ntBASIC5.74□□□□□ -1.49
CNTNAP3Q9BZ76 RNU6-1338P-201ENST00000516328 91 ntBASIC5.74□□□□□ -1.49
CNTNAP3Q9BZ76 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC5.74□□□□□ -1.49
CNTNAP3Q9BZ76 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
CNTNAP3Q9BZ76 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
CNTNAP3Q9BZ76 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC5.74□□□□□ -1.49
CNTNAP3Q9BZ76 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC5.74□□□□□ -1.49
CNTNAP3Q9BZ76 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC5.74□□□□□ -1.49
CNTNAP3Q9BZ76 IGBP1P1-201ENST00000554337 1009 ntBASIC5.74□□□□□ -1.49
CNTNAP3Q9BZ76 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC5.74□□□□□ -1.49
CNTNAP3Q9BZ76 AC091193.1-201ENST00000604640 448 ntBASIC5.74□□□□□ -1.49
CNTNAP3Q9BZ76 AC123768.4-201ENST00000616244 701 ntBASIC5.74□□□□□ -1.49
CNTNAP3Q9BZ76 MIR6758-201ENST00000620653 63 ntBASIC5.74□□□□□ -1.49
CNTNAP3Q9BZ76 AP000843.1-201ENST00000624880 701 ntBASIC5.74□□□□□ -1.49
CNTNAP3Q9BZ76 BDP1P-201ENST00000582658 1990 ntBASIC5.74□□□□□ -1.49
CNTNAP3Q9BZ76 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC5.74□□□□□ -1.49
CNTNAP3Q9BZ76 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC5.74□□□□□ -1.49
CNTNAP3Q9BZ76 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
CNTNAP3Q9BZ76 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CNTNAP3Q9BZ76 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CNTNAP3Q9BZ76 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
CNTNAP3Q9BZ76 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CNTNAP3Q9BZ76 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CNTNAP3Q9BZ76 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.74□□□□□ -1.49
CNTNAP3Q9BZ76 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CNTNAP3Q9BZ76 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CNTNAP3Q9BZ76 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC5.73□□□□□ -1.49
CNTNAP3Q9BZ76 LRRC37B-201ENST00000327564 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
CNTNAP3Q9BZ76 RASGRF1-201ENST00000394745 2850 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CNTNAP3Q9BZ76 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CNTNAP3Q9BZ76 THAP12P4-201ENST00000528321 2266 ntBASIC5.73□□□□□ -1.49
CNTNAP3Q9BZ76 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
CNTNAP3Q9BZ76 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CNTNAP3Q9BZ76 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
CNTNAP3Q9BZ76 SNORD81.1-201ENST00000363064 77 ntBASIC5.73□□□□□ -1.49
CNTNAP3Q9BZ76 Y_RNA.399-201ENST00000383955 105 ntBASIC5.73□□□□□ -1.49
CNTNAP3Q9BZ76 Y_RNA.418-201ENST00000384029 102 ntBASIC5.73□□□□□ -1.49
CNTNAP3Q9BZ76 RNA5SP487-201ENST00000410186 122 ntBASIC5.73□□□□□ -1.49
CNTNAP3Q9BZ76 RNU6-293P-201ENST00000411259 106 ntBASIC5.73□□□□□ -1.49
CNTNAP3Q9BZ76 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC5.73□□□□□ -1.49
CNTNAP3Q9BZ76 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.73□□□□□ -1.49
CNTNAP3Q9BZ76 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC5.73□□□□□ -1.49
CNTNAP3Q9BZ76 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC5.73□□□□□ -1.49
CNTNAP3Q9BZ76 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC5.73□□□□□ -1.49
CNTNAP3Q9BZ76 RPL36AP13-201ENST00000457490 317 ntBASIC5.73□□□□□ -1.49
CNTNAP3Q9BZ76 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC5.73□□□□□ -1.49
CNTNAP3Q9BZ76 SERF1AP1-201ENST00000514575 187 ntBASIC5.73□□□□□ -1.49
CNTNAP3Q9BZ76 Y_RNA.662-201ENST00000516028 97 ntBASIC5.73□□□□□ -1.49
CNTNAP3Q9BZ76 RNU7-4P-201ENST00000516961 62 ntBASIC5.73□□□□□ -1.49
CNTNAP3Q9BZ76 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC5.73□□□□□ -1.49
CNTNAP3Q9BZ76 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC5.73□□□□□ -1.49
CNTNAP3Q9BZ76 APAF1-207ENST00000547743 651 ntTSL 3 BASIC5.73□□□□□ -1.49
CNTNAP3Q9BZ76 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC5.73□□□□□ -1.49
CNTNAP3Q9BZ76 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.73□□□□□ -1.49
CNTNAP3Q9BZ76 DLEU2_2.2-201ENST00000615474 90 ntBASIC5.73□□□□□ -1.49
CNTNAP3Q9BZ76 AL590240.4-201ENST00000616908 390 ntBASIC5.73□□□□□ -1.49
CNTNAP3Q9BZ76 U6.106-201ENST00000636360 105 ntBASIC5.73□□□□□ -1.49
CNTNAP3Q9BZ76 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC5.73□□□□□ -1.49
CNTNAP3Q9BZ76 ZMAT1-206ENST00000540921 3139 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
CNTNAP3Q9BZ76 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CNTNAP3Q9BZ76 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
CNTNAP3Q9BZ76 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CNTNAP3Q9BZ76 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC5.73□□□□□ -1.49
CNTNAP3Q9BZ76 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
CNTNAP3Q9BZ76 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CNTNAP3Q9BZ76 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CNTNAP3Q9BZ76 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC5.73□□□□□ -1.49
CNTNAP3Q9BZ76 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
CNTNAP3Q9BZ76 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
CNTNAP3Q9BZ76 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CNTNAP3Q9BZ76 LRRC37A3-203ENST00000339474 2589 ntTSL 2 BASIC5.72□□□□□ -1.49
CNTNAP3Q9BZ76 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CNTNAP3Q9BZ76 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC5.72□□□□□ -1.49
CNTNAP3Q9BZ76 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CNTNAP3Q9BZ76 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
CNTNAP3Q9BZ76 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC5.72□□□□□ -1.49
CNTNAP3Q9BZ76 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC5.72□□□□□ -1.49
CNTNAP3Q9BZ76 AC126755.2-208ENST00000327792 462 ntBASIC5.72□□□□□ -1.49
CNTNAP3Q9BZ76 AC138969.1-213ENST00000331436 462 ntBASIC5.72□□□□□ -1.49
CNTNAP3Q9BZ76 Y_RNA.48-201ENST00000362710 103 ntBASIC5.72□□□□□ -1.49
CNTNAP3Q9BZ76 RNU1-49P-201ENST00000363468 159 ntBASIC5.72□□□□□ -1.49
CNTNAP3Q9BZ76 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC5.72□□□□□ -1.49
CNTNAP3Q9BZ76 Y_RNA.398-201ENST00000383952 99 ntBASIC5.72□□□□□ -1.49
CNTNAP3Q9BZ76 RNU6-1226P-201ENST00000384317 107 ntBASIC5.72□□□□□ -1.49
CNTNAP3Q9BZ76 MIR23B-201ENST00000384832 97 ntBASIC5.72□□□□□ -1.49
CNTNAP3Q9BZ76 SNORA48.7-201ENST00000391302 135 ntBASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms