Protein–RNA interactions for Protein: Q99715

COL12A1, Collagen alpha-1(XII) chain, humanhuman

Predictions only

Length 3,063 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1Q99715 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC1.88□□□□□ -2.11
COL12A1Q99715 AL118520.1-201ENST00000450770 291 ntBASIC1.88□□□□□ -2.11
COL12A1Q99715 RNU7-95P-201ENST00000459222 64 ntBASIC1.88□□□□□ -2.11
COL12A1Q99715 AC007182.2-201ENST00000489251 402 ntBASIC1.88□□□□□ -2.11
COL12A1Q99715 AC147055.1-201ENST00000509261 750 ntBASIC1.88□□□□□ -2.11
COL12A1Q99715 TXNP6-201ENST00000510190 310 ntBASIC1.88□□□□□ -2.11
COL12A1Q99715 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC1.88□□□□□ -2.11
COL12A1Q99715 PSMA3P-201ENST00000555485 635 ntBASIC1.88□□□□□ -2.11
COL12A1Q99715 AMZ2P1-203ENST00000565833 850 ntBASIC1.88□□□□□ -2.11
COL12A1Q99715 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC1.88□□□□□ -2.11
COL12A1Q99715 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC1.88□□□□□ -2.11
COL12A1Q99715 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC1.88□□□□□ -2.11
COL12A1Q99715 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
COL12A1Q99715 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC1.88□□□□□ -2.11
COL12A1Q99715 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC1.88□□□□□ -2.11
COL12A1Q99715 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC1.88□□□□□ -2.11
COL12A1Q99715 AC016717.2-201ENST00000609089 5141 ntBASIC1.87□□□□□ -2.11
COL12A1Q99715 AL023807.1-201ENST00000407932 359 ntBASIC1.87□□□□□ -2.11
COL12A1Q99715 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.87□□□□□ -2.11
COL12A1Q99715 AL513175.2-201ENST00000422071 443 ntBASIC1.87□□□□□ -2.11
COL12A1Q99715 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC1.87□□□□□ -2.11
COL12A1Q99715 AC004263.1-201ENST00000479327 332 ntBASIC1.87□□□□□ -2.11
COL12A1Q99715 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
COL12A1Q99715 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC1.87□□□□□ -2.11
COL12A1Q99715 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC1.87□□□□□ -2.11
COL12A1Q99715 AC012182.1-201ENST00000570133 895 ntBASIC1.87□□□□□ -2.11
COL12A1Q99715 AL078603.1-201ENST00000603824 313 ntBASIC1.87□□□□□ -2.11
COL12A1Q99715 AC093591.3-201ENST00000634516 308 ntBASIC1.87□□□□□ -2.11
COL12A1Q99715 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC1.87□□□□□ -2.11
COL12A1Q99715 LINC02477-201ENST00000512652 1417 ntTSL 5 BASIC1.87□□□□□ -2.11
COL12A1Q99715 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC1.87□□□□□ -2.11
COL12A1Q99715 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC1.87□□□□□ -2.11
COL12A1Q99715 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC1.87□□□□□ -2.11
COL12A1Q99715 OR7K1P-201ENST00000546439 926 ntBASIC1.87□□□□□ -2.11
COL12A1Q99715 AC091515.1-201ENST00000548110 679 ntBASIC1.87□□□□□ -2.11
COL12A1Q99715 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC1.87□□□□□ -2.11
COL12A1Q99715 MIR4255-201ENST00000579351 72 ntBASIC1.87□□□□□ -2.11
COL12A1Q99715 AC011492.1-201ENST00000600023 315 ntBASIC1.87□□□□□ -2.11
COL12A1Q99715 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC1.87□□□□□ -2.11
COL12A1Q99715 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
COL12A1Q99715 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC1.87□□□□□ -2.11
COL12A1Q99715 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
COL12A1Q99715 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC1.87□□□□□ -2.11
COL12A1Q99715 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC1.87□□□□□ -2.11
COL12A1Q99715 RPL23AP14-201ENST00000468281 468 ntBASIC1.87□□□□□ -2.11
COL12A1Q99715 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC1.87□□□□□ -2.11
COL12A1Q99715 RNA5SP61-201ENST00000516453 100 ntBASIC1.87□□□□□ -2.11
COL12A1Q99715 RN7SKP60-201ENST00000516985 239 ntBASIC1.87□□□□□ -2.11
COL12A1Q99715 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC1.87□□□□□ -2.11
COL12A1Q99715 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC1.87□□□□□ -2.11
COL12A1Q99715 AC009831.4-201ENST00000620744 325 ntBASIC1.87□□□□□ -2.11
COL12A1Q99715 EXOC5P1-201ENST00000510543 1969 ntBASIC1.87□□□□□ -2.11
COL12A1Q99715 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
COL12A1Q99715 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
COL12A1Q99715 RN7SKP226-201ENST00000364912 300 ntBASIC1.86□□□□□ -2.11
COL12A1Q99715 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
COL12A1Q99715 AC034244.1-201ENST00000507687 207 ntBASIC1.86□□□□□ -2.11
COL12A1Q99715 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC1.86□□□□□ -2.11
COL12A1Q99715 AL451074.6-201ENST00000608512 729 ntBASIC1.86□□□□□ -2.11
COL12A1Q99715 AC022709.1-201ENST00000615967 87 ntBASIC1.86□□□□□ -2.11
COL12A1Q99715 AC131238.1-201ENST00000617135 328 ntBASIC1.86□□□□□ -2.11
COL12A1Q99715 AL359740.1-201ENST00000624340 592 ntBASIC1.86□□□□□ -2.11
COL12A1Q99715 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC1.86□□□□□ -2.11
COL12A1Q99715 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
COL12A1Q99715 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC1.86□□□□□ -2.11
COL12A1Q99715 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC1.86□□□□□ -2.11
COL12A1Q99715 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC1.86□□□□□ -2.11
COL12A1Q99715 ERHP2-201ENST00000402323 299 ntBASIC1.86□□□□□ -2.11
COL12A1Q99715 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.86□□□□□ -2.11
COL12A1Q99715 AL353597.2-202ENST00000434901 373 ntBASIC1.86□□□□□ -2.11
COL12A1Q99715 AL137159.1-201ENST00000452808 512 ntBASIC1.86□□□□□ -2.11
COL12A1Q99715 RPL21P71-201ENST00000465598 459 ntBASIC1.86□□□□□ -2.11
COL12A1Q99715 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC1.86□□□□□ -2.11
COL12A1Q99715 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC1.86□□□□□ -2.11
COL12A1Q99715 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
COL12A1Q99715 AC012360.2-201ENST00000609349 391 ntBASIC1.86□□□□□ -2.11
COL12A1Q99715 MIR8081-201ENST00000611533 95 ntBASIC1.86□□□□□ -2.11
COL12A1Q99715 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC1.86□□□□□ -2.11
COL12A1Q99715 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
COL12A1Q99715 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
COL12A1Q99715 RNA5SP502-201ENST00000362694 119 ntBASIC1.85□□□□□ -2.11
COL12A1Q99715 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
COL12A1Q99715 AL354719.1-201ENST00000406535 843 ntBASIC1.85□□□□□ -2.11
COL12A1Q99715 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC1.85□□□□□ -2.11
COL12A1Q99715 RNU4-74P-201ENST00000411280 161 ntBASIC1.85□□□□□ -2.11
COL12A1Q99715 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC1.85□□□□□ -2.11
COL12A1Q99715 AC116158.1-201ENST00000560231 2129 ntBASIC1.85□□□□□ -2.11
COL12A1Q99715 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC1.85□□□□□ -2.11
COL12A1Q99715 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC1.85□□□□□ -2.11
COL12A1Q99715 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
COL12A1Q99715 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC1.85□□□□□ -2.11
COL12A1Q99715 API5P2-201ENST00000397055 1498 ntBASIC1.85□□□□□ -2.11
COL12A1Q99715 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC1.85□□□□□ -2.11
COL12A1Q99715 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC1.85□□□□□ -2.11
COL12A1Q99715 AC104332.2-201ENST00000429959 156 ntBASIC1.85□□□□□ -2.11
COL12A1Q99715 SNORD13-201ENST00000459299 104 ntBASIC1.85□□□□□ -2.11
COL12A1Q99715 AC140059.1-201ENST00000489238 361 ntBASIC1.85□□□□□ -2.11
COL12A1Q99715 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC1.85□□□□□ -2.11
COL12A1Q99715 MIR7153-201ENST00000637758 57 ntBASIC1.85□□□□□ -2.11
COL12A1Q99715 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms