Protein–RNA interactions for Protein: Q96HJ3

CCDC34, Coiled-coil domain-containing protein 34, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC34Q96HJ3 SNORA70.2-201ENST00000364506 135 ntBASIC4.03□□□□□ -1.76
CCDC34Q96HJ3 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CCDC34Q96HJ3 DHFRP6-201ENST00000401776 268 ntBASIC4.03□□□□□ -1.76
CCDC34Q96HJ3 MIR1284-201ENST00000408337 120 ntBASIC4.03□□□□□ -1.76
CCDC34Q96HJ3 RN7SKP156-201ENST00000410308 342 ntBASIC4.03□□□□□ -1.76
CCDC34Q96HJ3 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC4.03□□□□□ -1.76
CCDC34Q96HJ3 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC4.03□□□□□ -1.76
CCDC34Q96HJ3 HMGB1P49-201ENST00000418882 569 ntBASIC4.03□□□□□ -1.76
CCDC34Q96HJ3 TIMM9P2-201ENST00000419324 266 ntBASIC4.03□□□□□ -1.76
CCDC34Q96HJ3 AC245054.1-201ENST00000420944 258 ntBASIC4.03□□□□□ -1.76
CCDC34Q96HJ3 NEK4P1-201ENST00000433383 879 ntBASIC4.03□□□□□ -1.76
CCDC34Q96HJ3 OR4C10P-201ENST00000434991 931 ntBASIC4.03□□□□□ -1.76
CCDC34Q96HJ3 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC4.03□□□□□ -1.76
CCDC34Q96HJ3 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC4.03□□□□□ -1.76
CCDC34Q96HJ3 HMGB3P8-201ENST00000449709 577 ntBASIC4.03□□□□□ -1.76
CCDC34Q96HJ3 RPL18AP17-201ENST00000455326 198 ntBASIC4.03□□□□□ -1.76
CCDC34Q96HJ3 AC087312.1-201ENST00000471411 480 ntBASIC4.03□□□□□ -1.76
CCDC34Q96HJ3 TAF8-207ENST00000482432 556 ntTSL 2 BASIC4.03□□□□□ -1.76
CCDC34Q96HJ3 NAA50-206ENST00000493454 964 ntTSL 2 BASIC4.03□□□□□ -1.76
CCDC34Q96HJ3 AC020893.1-201ENST00000502452 580 ntBASIC4.03□□□□□ -1.76
CCDC34Q96HJ3 PCBP2P3-201ENST00000509726 843 ntBASIC4.03□□□□□ -1.76
CCDC34Q96HJ3 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC4.03□□□□□ -1.76
CCDC34Q96HJ3 SNORA31.20-201ENST00000517111 133 ntBASIC4.03□□□□□ -1.76
CCDC34Q96HJ3 TBCA-206ENST00000518338 551 ntTSL 2 BASIC4.03□□□□□ -1.76
CCDC34Q96HJ3 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
CCDC34Q96HJ3 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC4.03□□□□□ -1.76
CCDC34Q96HJ3 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CCDC34Q96HJ3 DUXAP6-201ENST00000553858 601 ntBASIC4.03□□□□□ -1.76
CCDC34Q96HJ3 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC4.03□□□□□ -1.76
CCDC34Q96HJ3 PARP1P2-201ENST00000556806 195 ntBASIC4.03□□□□□ -1.76
CCDC34Q96HJ3 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC4.03□□□□□ -1.76
CCDC34Q96HJ3 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC4.03□□□□□ -1.76
CCDC34Q96HJ3 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC4.03□□□□□ -1.76
CCDC34Q96HJ3 AC025588.2-201ENST00000604851 466 ntBASIC4.03□□□□□ -1.76
CCDC34Q96HJ3 AL590392.1-201ENST00000604960 446 ntBASIC4.03□□□□□ -1.76
CCDC34Q96HJ3 AL390240.1-201ENST00000612950 384 ntBASIC4.03□□□□□ -1.76
CCDC34Q96HJ3 AL139418.1-201ENST00000613613 177 ntBASIC4.03□□□□□ -1.76
CCDC34Q96HJ3 5S_rRNA.12-201ENST00000617631 107 ntBASIC4.03□□□□□ -1.76
CCDC34Q96HJ3 AC118273.1-201ENST00000525324 3006 ntBASIC4.03□□□□□ -1.76
CCDC34Q96HJ3 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CCDC34Q96HJ3 GDI2P1-201ENST00000429312 1336 ntBASIC4.02□□□□□ -1.77
CCDC34Q96HJ3 AC007256.1-201ENST00000392253 2765 ntBASIC4.02□□□□□ -1.77
CCDC34Q96HJ3 CUBN-201ENST00000377823 705 ntTSL 3 BASIC4.02□□□□□ -1.77
CCDC34Q96HJ3 DEFB109C-201ENST00000382575 264 ntBASIC4.02□□□□□ -1.77
CCDC34Q96HJ3 DEFB109B-201ENST00000382656 264 ntBASIC4.02□□□□□ -1.77
CCDC34Q96HJ3 RNA5SP129-201ENST00000410276 118 ntBASIC4.02□□□□□ -1.77
CCDC34Q96HJ3 RNU2-15P-201ENST00000410692 191 ntBASIC4.02□□□□□ -1.77
CCDC34Q96HJ3 USP9YP33-201ENST00000412220 421 ntBASIC4.02□□□□□ -1.77
CCDC34Q96HJ3 RPS24P7-201ENST00000416921 246 ntBASIC4.02□□□□□ -1.77
CCDC34Q96HJ3 RPL22P18-201ENST00000417197 377 ntBASIC4.02□□□□□ -1.77
CCDC34Q96HJ3 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC4.02□□□□□ -1.77
CCDC34Q96HJ3 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC4.02□□□□□ -1.77
CCDC34Q96HJ3 USP9YP35-201ENST00000435696 412 ntBASIC4.02□□□□□ -1.77
CCDC34Q96HJ3 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC4.02□□□□□ -1.77
CCDC34Q96HJ3 SSXP4-201ENST00000451349 245 ntBASIC4.02□□□□□ -1.77
CCDC34Q96HJ3 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC4.02□□□□□ -1.77
CCDC34Q96HJ3 AC034244.1-201ENST00000507687 207 ntBASIC4.02□□□□□ -1.77
CCDC34Q96HJ3 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC4.02□□□□□ -1.77
CCDC34Q96HJ3 RNU6-27P-201ENST00000516146 107 ntBASIC4.02□□□□□ -1.77
CCDC34Q96HJ3 RNA5SP468-201ENST00000516782 93 ntBASIC4.02□□□□□ -1.77
CCDC34Q96HJ3 RNU6-352P-201ENST00000516908 107 ntBASIC4.02□□□□□ -1.77
CCDC34Q96HJ3 OR5AK1P-201ENST00000524837 922 ntBASIC4.02□□□□□ -1.77
CCDC34Q96HJ3 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC4.02□□□□□ -1.77
CCDC34Q96HJ3 SMILR-201ENST00000533992 553 ntTSL 4 BASIC4.02□□□□□ -1.77
CCDC34Q96HJ3 REXO2-218ENST00000544827 880 ntTSL 3 BASIC4.02□□□□□ -1.77
CCDC34Q96HJ3 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CCDC34Q96HJ3 NACA-211ENST00000548563 827 ntTSL 5 BASIC4.02□□□□□ -1.77
CCDC34Q96HJ3 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC4.02□□□□□ -1.77
CCDC34Q96HJ3 AC009712.1-201ENST00000564938 316 ntBASIC4.02□□□□□ -1.77
CCDC34Q96HJ3 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC4.02□□□□□ -1.77
CCDC34Q96HJ3 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC4.02□□□□□ -1.77
CCDC34Q96HJ3 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC4.02□□□□□ -1.77
CCDC34Q96HJ3 AC245036.5-201ENST00000596330 847 ntBASIC4.02□□□□□ -1.77
CCDC34Q96HJ3 RNU1-30P-201ENST00000606575 163 ntBASIC4.02□□□□□ -1.77
CCDC34Q96HJ3 AC245297.2-201ENST00000610119 565 ntBASIC4.02□□□□□ -1.77
CCDC34Q96HJ3 AC022149.2-201ENST00000621061 203 ntBASIC4.02□□□□□ -1.77
CCDC34Q96HJ3 MTND2P41-201ENST00000637599 773 ntBASIC4.02□□□□□ -1.77
CCDC34Q96HJ3 MIR7153-201ENST00000637758 57 ntBASIC4.02□□□□□ -1.77
CCDC34Q96HJ3 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC4.02□□□□□ -1.77
CCDC34Q96HJ3 AC006927.4-201ENST00000639187 543 ntBASIC4.02□□□□□ -1.77
CCDC34Q96HJ3 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CCDC34Q96HJ3 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
CCDC34Q96HJ3 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CCDC34Q96HJ3 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC4.02□□□□□ -1.77
CCDC34Q96HJ3 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CCDC34Q96HJ3 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CCDC34Q96HJ3 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
CCDC34Q96HJ3 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CCDC34Q96HJ3 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
CCDC34Q96HJ3 RPL7P26-201ENST00000333817 754 ntBASIC4.01□□□□□ -1.77
CCDC34Q96HJ3 SOD2P1-201ENST00000396543 562 ntBASIC4.01□□□□□ -1.77
CCDC34Q96HJ3 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC4.01□□□□□ -1.77
CCDC34Q96HJ3 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC4.01□□□□□ -1.77
CCDC34Q96HJ3 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC4.01□□□□□ -1.77
CCDC34Q96HJ3 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC4.01□□□□□ -1.77
CCDC34Q96HJ3 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC4.01□□□□□ -1.77
CCDC34Q96HJ3 PSMA6P3-201ENST00000428242 164 ntBASIC4.01□□□□□ -1.77
CCDC34Q96HJ3 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC4.01□□□□□ -1.77
CCDC34Q96HJ3 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CCDC34Q96HJ3 TRGVB-201ENST00000453257 471 ntBASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms