Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 AL110115.1-201ENST00000614396 364 ntBASIC3.56□□□□□ -1.84
PDLIM5Q96HC4 PACRG-211ENST00000621363 360 ntTSL 5 BASIC3.56□□□□□ -1.84
PDLIM5Q96HC4 AC073348.1-201ENST00000623002 331 ntBASIC3.56□□□□□ -1.84
PDLIM5Q96HC4 AC068724.3-201ENST00000625906 87 ntBASIC3.56□□□□□ -1.84
PDLIM5Q96HC4 MIR1322-201ENST00000638013 71 ntBASIC3.56□□□□□ -1.84
PDLIM5Q96HC4 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC3.56□□□□□ -1.84
PDLIM5Q96HC4 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.56□□□□□ -1.84
PDLIM5Q96HC4 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
PDLIM5Q96HC4 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC3.55□□□□□ -1.84
PDLIM5Q96HC4 AC097714.1-201ENST00000511272 1647 ntBASIC3.55□□□□□ -1.84
PDLIM5Q96HC4 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
PDLIM5Q96HC4 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.55□□□□□ -1.84
PDLIM5Q96HC4 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
PDLIM5Q96HC4 OR4G11P-202ENST00000642116 1414 ntBASIC3.55□□□□□ -1.84
PDLIM5Q96HC4 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
PDLIM5Q96HC4 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
PDLIM5Q96HC4 NF1-214ENST00000490416 1329 ntTSL 3 BASIC3.55□□□□□ -1.84
PDLIM5Q96HC4 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
PDLIM5Q96HC4 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
PDLIM5Q96HC4 SNORD113-6-201ENST00000363345 75 ntBASIC3.55□□□□□ -1.84
PDLIM5Q96HC4 RNU6-1214P-201ENST00000363650 109 ntBASIC3.55□□□□□ -1.84
PDLIM5Q96HC4 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC3.55□□□□□ -1.84
PDLIM5Q96HC4 SNORA57.3-201ENST00000411095 141 ntBASIC3.55□□□□□ -1.84
PDLIM5Q96HC4 AC245052.5-201ENST00000416320 649 ntBASIC3.55□□□□□ -1.84
PDLIM5Q96HC4 MTATP6P27-201ENST00000416987 621 ntBASIC3.55□□□□□ -1.84
PDLIM5Q96HC4 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.55□□□□□ -1.84
PDLIM5Q96HC4 USP9YP31-201ENST00000431405 881 ntBASIC3.55□□□□□ -1.84
PDLIM5Q96HC4 AC004866.2-201ENST00000438285 481 ntBASIC3.55□□□□□ -1.84
PDLIM5Q96HC4 RABEPKP1-201ENST00000440529 1026 ntBASIC3.55□□□□□ -1.84
PDLIM5Q96HC4 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC3.55□□□□□ -1.84
PDLIM5Q96HC4 RPL17P49-201ENST00000443728 411 ntBASIC3.55□□□□□ -1.84
PDLIM5Q96HC4 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC3.55□□□□□ -1.84
PDLIM5Q96HC4 Z82190.1-201ENST00000454534 490 ntBASIC3.55□□□□□ -1.84
PDLIM5Q96HC4 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC3.55□□□□□ -1.84
PDLIM5Q96HC4 AC092754.2-201ENST00000463506 460 ntBASIC3.55□□□□□ -1.84
PDLIM5Q96HC4 AC004263.1-201ENST00000479327 332 ntBASIC3.55□□□□□ -1.84
PDLIM5Q96HC4 NIPA2P2-201ENST00000496376 1083 ntBASIC3.55□□□□□ -1.84
PDLIM5Q96HC4 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC3.55□□□□□ -1.84
PDLIM5Q96HC4 ARL2BPP6-201ENST00000512757 439 ntBASIC3.55□□□□□ -1.84
PDLIM5Q96HC4 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.55□□□□□ -1.84
PDLIM5Q96HC4 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.55□□□□□ -1.84
PDLIM5Q96HC4 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC3.55□□□□□ -1.84
PDLIM5Q96HC4 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC3.55□□□□□ -1.84
PDLIM5Q96HC4 OR5AP1P-201ENST00000529730 940 ntBASIC3.55□□□□□ -1.84
PDLIM5Q96HC4 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC3.55□□□□□ -1.84
PDLIM5Q96HC4 AC024224.1-201ENST00000538284 609 ntBASIC3.55□□□□□ -1.84
PDLIM5Q96HC4 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC3.55□□□□□ -1.84
PDLIM5Q96HC4 MRPS36P5-201ENST00000551909 298 ntBASIC3.55□□□□□ -1.84
PDLIM5Q96HC4 AL163153.1-201ENST00000554223 283 ntBASIC3.55□□□□□ -1.84
PDLIM5Q96HC4 HIGD1AP17-201ENST00000554576 276 ntBASIC3.55□□□□□ -1.84
PDLIM5Q96HC4 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC3.55□□□□□ -1.84
PDLIM5Q96HC4 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.55□□□□□ -1.84
PDLIM5Q96HC4 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC3.55□□□□□ -1.84
PDLIM5Q96HC4 AC145350.1-201ENST00000567426 208 ntBASIC3.55□□□□□ -1.84
PDLIM5Q96HC4 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.55□□□□□ -1.84
PDLIM5Q96HC4 AC006077.1-201ENST00000604746 343 ntBASIC3.55□□□□□ -1.84
PDLIM5Q96HC4 AC022509.4-201ENST00000621404 572 ntBASIC3.55□□□□□ -1.84
PDLIM5Q96HC4 AC004009.2-201ENST00000623016 728 ntBASIC3.55□□□□□ -1.84
PDLIM5Q96HC4 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
PDLIM5Q96HC4 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
PDLIM5Q96HC4 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.55□□□□□ -1.84
PDLIM5Q96HC4 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.55□□□□□ -1.84
PDLIM5Q96HC4 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.55□□□□□ -1.84
PDLIM5Q96HC4 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC3.55□□□□□ -1.84
PDLIM5Q96HC4 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.55□□□□□ -1.84
PDLIM5Q96HC4 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
PDLIM5Q96HC4 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.55□□□□□ -1.84
PDLIM5Q96HC4 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
PDLIM5Q96HC4 AL356473.1-201ENST00000406203 1408 ntBASIC3.54□□□□□ -1.84
PDLIM5Q96HC4 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC3.54□□□□□ -1.84
PDLIM5Q96HC4 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
PDLIM5Q96HC4 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
PDLIM5Q96HC4 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
PDLIM5Q96HC4 OR5H2-201ENST00000355273 945 ntBASIC3.54□□□□□ -1.84
PDLIM5Q96HC4 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
PDLIM5Q96HC4 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
PDLIM5Q96HC4 RN7SKP280-201ENST00000364196 304 ntBASIC3.54□□□□□ -1.84
PDLIM5Q96HC4 RNA5SP515-201ENST00000364570 118 ntBASIC3.54□□□□□ -1.84
PDLIM5Q96HC4 RNU6-83P-201ENST00000384568 112 ntBASIC3.54□□□□□ -1.84
PDLIM5Q96HC4 U8.11-201ENST00000384699 133 ntBASIC3.54□□□□□ -1.84
PDLIM5Q96HC4 U8.12-201ENST00000384701 133 ntBASIC3.54□□□□□ -1.84
PDLIM5Q96HC4 AL049545.1-201ENST00000401856 572 ntBASIC3.54□□□□□ -1.84
PDLIM5Q96HC4 RN7SKP263-201ENST00000411194 309 ntBASIC3.54□□□□□ -1.84
PDLIM5Q96HC4 AL161449.1-201ENST00000414531 1199 ntBASIC3.54□□□□□ -1.84
PDLIM5Q96HC4 AL008987.1-201ENST00000415528 237 ntBASIC3.54□□□□□ -1.84
PDLIM5Q96HC4 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC3.54□□□□□ -1.84
PDLIM5Q96HC4 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC3.54□□□□□ -1.84
PDLIM5Q96HC4 YPEL5P1-201ENST00000419731 367 ntBASIC3.54□□□□□ -1.84
PDLIM5Q96HC4 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
PDLIM5Q96HC4 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC3.54□□□□□ -1.84
PDLIM5Q96HC4 AC079780.1-201ENST00000428259 207 ntBASIC3.54□□□□□ -1.84
PDLIM5Q96HC4 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.54□□□□□ -1.84
PDLIM5Q96HC4 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC3.54□□□□□ -1.84
PDLIM5Q96HC4 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.54□□□□□ -1.84
PDLIM5Q96HC4 COX7BP2-201ENST00000437976 242 ntBASIC3.54□□□□□ -1.84
PDLIM5Q96HC4 RPS29P7-201ENST00000439662 171 ntBASIC3.54□□□□□ -1.84
PDLIM5Q96HC4 MTND2P20-201ENST00000440805 661 ntBASIC3.54□□□□□ -1.84
PDLIM5Q96HC4 HSPE1P28-201ENST00000443139 211 ntBASIC3.54□□□□□ -1.84
PDLIM5Q96HC4 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC3.54□□□□□ -1.84
PDLIM5Q96HC4 RPL12P26-201ENST00000452430 487 ntBASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms