Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 KITLG-201ENST00000228280 1642 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
SVIPQ8NHG7 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC3.23□□□□□ -1.89
SVIPQ8NHG7 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
SVIPQ8NHG7 MGST2-201ENST00000265498 801 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
SVIPQ8NHG7 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC3.23□□□□□ -1.89
SVIPQ8NHG7 RNA5SP85-201ENST00000365378 119 ntBASIC3.23□□□□□ -1.89
SVIPQ8NHG7 RNU6-827P-201ENST00000365553 106 ntBASIC3.23□□□□□ -1.89
SVIPQ8NHG7 RNU6-622P-201ENST00000384272 103 ntBASIC3.23□□□□□ -1.89
SVIPQ8NHG7 SNORA10B-201ENST00000384458 133 ntBASIC3.23□□□□□ -1.89
SVIPQ8NHG7 RNU1-57P-201ENST00000384491 166 ntBASIC3.23□□□□□ -1.89
SVIPQ8NHG7 Y_RNA.530-201ENST00000384587 101 ntBASIC3.23□□□□□ -1.89
SVIPQ8NHG7 Y_RNA.615-201ENST00000410769 117 ntBASIC3.23□□□□□ -1.89
SVIPQ8NHG7 AC019181.1-201ENST00000417151 310 ntBASIC3.23□□□□□ -1.89
SVIPQ8NHG7 ACTG1P10-201ENST00000428275 1082 ntBASIC3.23□□□□□ -1.89
SVIPQ8NHG7 LINC00106-201ENST00000430235 370 ntTSL 2 BASIC3.23□□□□□ -1.89
SVIPQ8NHG7 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC3.23□□□□□ -1.89
SVIPQ8NHG7 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC3.23□□□□□ -1.89
SVIPQ8NHG7 RPS17P8-201ENST00000434525 335 ntBASIC3.23□□□□□ -1.89
SVIPQ8NHG7 RPE-210ENST00000438204 796 ntTSL 2 BASIC3.23□□□□□ -1.89
SVIPQ8NHG7 ZNF816-205ENST00000438970 491 ntTSL 4 BASIC3.23□□□□□ -1.89
SVIPQ8NHG7 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC3.23□□□□□ -1.89
SVIPQ8NHG7 EEF1B2P7-201ENST00000451177 676 ntBASIC3.23□□□□□ -1.89
SVIPQ8NHG7 RPE-214ENST00000452025 779 ntTSL 3 BASIC3.23□□□□□ -1.89
SVIPQ8NHG7 PFN1P10-201ENST00000455962 327 ntBASIC3.23□□□□□ -1.89
SVIPQ8NHG7 TREX1-203ENST00000456089 629 ntTSL 3 BASIC3.23□□□□□ -1.89
SVIPQ8NHG7 AL121721.1-201ENST00000460400 568 ntTSL 4 BASIC3.23□□□□□ -1.89
SVIPQ8NHG7 AC117503.1-201ENST00000472241 394 ntBASIC3.23□□□□□ -1.89
SVIPQ8NHG7 FXYD4-201ENST00000476166 770 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
SVIPQ8NHG7 CKS1BP2-201ENST00000497342 240 ntBASIC3.23□□□□□ -1.89
SVIPQ8NHG7 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC3.23□□□□□ -1.89
SVIPQ8NHG7 AL645949.1-201ENST00000510094 324 ntBASIC3.23□□□□□ -1.89
SVIPQ8NHG7 AC104619.4-201ENST00000510773 249 ntBASIC3.23□□□□□ -1.89
SVIPQ8NHG7 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.23□□□□□ -1.89
SVIPQ8NHG7 AC114781.2-201ENST00000515670 394 ntTSL 3 BASIC3.23□□□□□ -1.89
SVIPQ8NHG7 IGKV2-18-201ENST00000522607 343 ntBASIC3.23□□□□□ -1.89
SVIPQ8NHG7 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC3.23□□□□□ -1.89
SVIPQ8NHG7 AC100770.1-201ENST00000532310 322 ntBASIC3.23□□□□□ -1.89
SVIPQ8NHG7 OR7E1P-201ENST00000533891 958 ntBASIC3.23□□□□□ -1.89
SVIPQ8NHG7 LINC02439-201ENST00000538783 450 ntTSL 3 BASIC3.23□□□□□ -1.89
SVIPQ8NHG7 BICD1-206ENST00000551086 423 ntTSL 3 BASIC3.23□□□□□ -1.89
SVIPQ8NHG7 LINC02413-202ENST00000552353 898 ntTSL 5 BASIC3.23□□□□□ -1.89
SVIPQ8NHG7 PSMA3P-201ENST00000555485 635 ntBASIC3.23□□□□□ -1.89
SVIPQ8NHG7 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC3.23□□□□□ -1.89
SVIPQ8NHG7 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC3.23□□□□□ -1.89
SVIPQ8NHG7 AC051619.1-201ENST00000560007 616 ntBASIC3.23□□□□□ -1.89
SVIPQ8NHG7 AC023906.4-202ENST00000560613 823 ntTSL 2 BASIC3.23□□□□□ -1.89
SVIPQ8NHG7 AL121578.3-201ENST00000567273 710 ntTSL 3 BASIC3.23□□□□□ -1.89
SVIPQ8NHG7 MIR5572-201ENST00000583188 137 ntBASIC3.23□□□□□ -1.89
SVIPQ8NHG7 MIR4506-201ENST00000584693 77 ntBASIC3.23□□□□□ -1.89
SVIPQ8NHG7 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC3.23□□□□□ -1.89
SVIPQ8NHG7 BNIP3P16-201ENST00000589779 534 ntBASIC3.23□□□□□ -1.89
SVIPQ8NHG7 ZIM2-202ENST00000593931 483 ntTSL 3 BASIC3.23□□□□□ -1.89
SVIPQ8NHG7 VN1R107P-201ENST00000601784 209 ntBASIC3.23□□□□□ -1.89
SVIPQ8NHG7 DMKN-268ENST00000602781 827 ntAPPRIS ALT2 TSL 3 BASIC3.23□□□□□ -1.89
SVIPQ8NHG7 CHCHD2P3-201ENST00000603038 451 ntBASIC3.23□□□□□ -1.89
SVIPQ8NHG7 IGLCOR22-2-201ENST00000605398 313 ntBASIC3.23□□□□□ -1.89
SVIPQ8NHG7 AC002059.1-201ENST00000608014 477 ntBASIC3.23□□□□□ -1.89
SVIPQ8NHG7 VDAC1P8-210ENST00000610068 1251 ntTSL 5 BASIC3.23□□□□□ -1.89
SVIPQ8NHG7 Metazoa_SRP.122-201ENST00000610476 285 ntBASIC3.23□□□□□ -1.89
SVIPQ8NHG7 MIR486-1-201ENST00000612171 68 ntBASIC3.23□□□□□ -1.89
SVIPQ8NHG7 AC100827.5-201ENST00000615883 426 ntBASIC3.23□□□□□ -1.89
SVIPQ8NHG7 SEM1-223ENST00000623498 582 ntTSL 5 BASIC3.23□□□□□ -1.89
SVIPQ8NHG7 AC006065.6-201ENST00000625201 545 ntBASIC3.23□□□□□ -1.89
SVIPQ8NHG7 DPCD-206ENST00000626968 541 ntTSL 5 BASIC3.23□□□□□ -1.89
SVIPQ8NHG7 RN7SK-201ENST00000636484 328 ntBASIC3.23□□□□□ -1.89
SVIPQ8NHG7 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.23□□□□□ -1.89
SVIPQ8NHG7 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
SVIPQ8NHG7 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.23□□□□□ -1.89
SVIPQ8NHG7 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.23□□□□□ -1.89
SVIPQ8NHG7 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.23□□□□□ -1.89
SVIPQ8NHG7 SRRM1P3-201ENST00000426911 2678 ntBASIC3.23□□□□□ -1.89
SVIPQ8NHG7 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
SVIPQ8NHG7 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
SVIPQ8NHG7 Z82217.1-201ENST00000625157 8149 ntBASIC3.22□□□□□ -1.89
SVIPQ8NHG7 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
SVIPQ8NHG7 FANCB-201ENST00000324138 2894 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
SVIPQ8NHG7 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC3.22□□□□□ -1.89
SVIPQ8NHG7 FIGNL1-214ENST00000617389 3259 ntAPPRIS P1 TSL 4 BASIC3.22□□□□□ -1.89
SVIPQ8NHG7 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC3.22□□□□□ -1.89
SVIPQ8NHG7 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
SVIPQ8NHG7 GNG8-201ENST00000300873 216 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
SVIPQ8NHG7 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
SVIPQ8NHG7 SNORA80C-201ENST00000362917 135 ntBASIC3.22□□□□□ -1.89
SVIPQ8NHG7 SNORA38-201ENST00000363946 132 ntBASIC3.22□□□□□ -1.89
SVIPQ8NHG7 RNU6-522P-201ENST00000364497 107 ntBASIC3.22□□□□□ -1.89
SVIPQ8NHG7 RN7SKP6-201ENST00000364795 319 ntBASIC3.22□□□□□ -1.89
SVIPQ8NHG7 HLA-DRA-201ENST00000374982 1169 ntBASIC3.22□□□□□ -1.89
SVIPQ8NHG7 MIR187-201ENST00000385062 109 ntBASIC3.22□□□□□ -1.89
SVIPQ8NHG7 IGLV3-9-201ENST00000390316 461 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
SVIPQ8NHG7 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC3.22□□□□□ -1.89
SVIPQ8NHG7 AC009494.1-201ENST00000406090 455 ntBASIC3.22□□□□□ -1.89
SVIPQ8NHG7 U3.33-201ENST00000408117 204 ntBASIC3.22□□□□□ -1.89
SVIPQ8NHG7 RNU6-293P-201ENST00000411259 106 ntBASIC3.22□□□□□ -1.89
SVIPQ8NHG7 LINC00159-201ENST00000411605 438 ntTSL 3 BASIC3.22□□□□□ -1.89
SVIPQ8NHG7 AL451048.1-201ENST00000413328 217 ntTSL 3 BASIC3.22□□□□□ -1.89
SVIPQ8NHG7 AC126124.2-201ENST00000413542 321 ntBASIC3.22□□□□□ -1.89
SVIPQ8NHG7 AL356108.1-201ENST00000416510 675 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
SVIPQ8NHG7 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC3.22□□□□□ -1.89
SVIPQ8NHG7 USP9YP20-201ENST00000419224 558 ntBASIC3.22□□□□□ -1.89
SVIPQ8NHG7 LINC01980-202ENST00000425195 491 ntTSL 3 BASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 153.2 ms