Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 AC109780.2-201ENST00000413467 845 ntBASIC4.85□□□□□ -1.63
UBE3BQ7Z3V4 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC4.85□□□□□ -1.63
UBE3BQ7Z3V4 NPM1P24-201ENST00000428039 894 ntBASIC4.85□□□□□ -1.63
UBE3BQ7Z3V4 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
UBE3BQ7Z3V4 MTND3P21-201ENST00000433774 331 ntBASIC4.85□□□□□ -1.63
UBE3BQ7Z3V4 RPL37P21-201ENST00000435890 276 ntBASIC4.85□□□□□ -1.63
UBE3BQ7Z3V4 MTATP6P23-201ENST00000440153 476 ntBASIC4.85□□□□□ -1.63
UBE3BQ7Z3V4 RPL7P31-201ENST00000450192 724 ntBASIC4.85□□□□□ -1.63
UBE3BQ7Z3V4 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC4.85□□□□□ -1.63
UBE3BQ7Z3V4 MEMO1P3-201ENST00000459811 302 ntBASIC4.85□□□□□ -1.63
UBE3BQ7Z3V4 AC004924.1-201ENST00000480160 781 ntBASIC4.85□□□□□ -1.63
UBE3BQ7Z3V4 RPL7P24-201ENST00000493052 752 ntBASIC4.85□□□□□ -1.63
UBE3BQ7Z3V4 AC023424.2-201ENST00000493479 777 ntBASIC4.85□□□□□ -1.63
UBE3BQ7Z3V4 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC4.85□□□□□ -1.63
UBE3BQ7Z3V4 OR5M7P-201ENST00000526140 972 ntBASIC4.85□□□□□ -1.63
UBE3BQ7Z3V4 AP002748.2-201ENST00000528671 348 ntBASIC4.85□□□□□ -1.63
UBE3BQ7Z3V4 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC4.85□□□□□ -1.63
UBE3BQ7Z3V4 OR6C73P-201ENST00000546432 358 ntBASIC4.85□□□□□ -1.63
UBE3BQ7Z3V4 EEF1B2P4-201ENST00000551398 348 ntBASIC4.85□□□□□ -1.63
UBE3BQ7Z3V4 GNRHR2P1-201ENST00000555315 631 ntBASIC4.85□□□□□ -1.63
UBE3BQ7Z3V4 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC4.85□□□□□ -1.63
UBE3BQ7Z3V4 TPRKBP2-201ENST00000565969 475 ntBASIC4.85□□□□□ -1.63
UBE3BQ7Z3V4 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC4.85□□□□□ -1.63
UBE3BQ7Z3V4 MIR4444-1-201ENST00000581696 74 ntBASIC4.85□□□□□ -1.63
UBE3BQ7Z3V4 MIR4444-2-201ENST00000584390 74 ntBASIC4.85□□□□□ -1.63
UBE3BQ7Z3V4 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.85□□□□□ -1.63
UBE3BQ7Z3V4 OR4G1P-201ENST00000588632 938 ntBASIC4.85□□□□□ -1.63
UBE3BQ7Z3V4 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC4.85□□□□□ -1.63
UBE3BQ7Z3V4 AC005344.1-201ENST00000613391 459 ntBASIC4.85□□□□□ -1.63
UBE3BQ7Z3V4 AL591424.2-201ENST00000617023 128 ntBASIC4.85□□□□□ -1.63
UBE3BQ7Z3V4 TEX41-300ENST00000631048 69 ntTSL 5 BASIC4.85□□□□□ -1.63
UBE3BQ7Z3V4 GDI2P1-201ENST00000429312 1336 ntBASIC4.85□□□□□ -1.63
UBE3BQ7Z3V4 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC4.85□□□□□ -1.63
UBE3BQ7Z3V4 AC114546.3-201ENST00000623582 1734 ntBASIC4.85□□□□□ -1.63
UBE3BQ7Z3V4 MTND5P26-201ENST00000426018 1752 ntBASIC4.85□□□□□ -1.63
UBE3BQ7Z3V4 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.85□□□□□ -1.63
UBE3BQ7Z3V4 AC107081.3-201ENST00000612715 2034 ntBASIC4.85□□□□□ -1.63
UBE3BQ7Z3V4 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
UBE3BQ7Z3V4 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.85□□□□□ -1.63
UBE3BQ7Z3V4 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
UBE3BQ7Z3V4 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
UBE3BQ7Z3V4 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
UBE3BQ7Z3V4 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.84□□□□□ -1.63
UBE3BQ7Z3V4 SNORA73.2-201ENST00000364946 201 ntBASIC4.84□□□□□ -1.63
UBE3BQ7Z3V4 AC019155.1-201ENST00000382242 574 ntBASIC4.84□□□□□ -1.63
UBE3BQ7Z3V4 RNU6-921P-201ENST00000384361 107 ntBASIC4.84□□□□□ -1.63
UBE3BQ7Z3V4 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC4.84□□□□□ -1.63
UBE3BQ7Z3V4 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC4.84□□□□□ -1.63
UBE3BQ7Z3V4 AL139247.1-201ENST00000422768 325 ntBASIC4.84□□□□□ -1.63
UBE3BQ7Z3V4 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC4.84□□□□□ -1.63
UBE3BQ7Z3V4 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC4.84□□□□□ -1.63
UBE3BQ7Z3V4 NPM1P34-201ENST00000428821 893 ntBASIC4.84□□□□□ -1.63
UBE3BQ7Z3V4 RBMX2P4-201ENST00000441256 376 ntBASIC4.84□□□□□ -1.63
UBE3BQ7Z3V4 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC4.84□□□□□ -1.63
UBE3BQ7Z3V4 MTCO1P27-201ENST00000448269 226 ntBASIC4.84□□□□□ -1.63
UBE3BQ7Z3V4 FGF7P6-202ENST00000451282 293 ntBASIC4.84□□□□□ -1.63
UBE3BQ7Z3V4 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC4.84□□□□□ -1.63
UBE3BQ7Z3V4 TMED11P-201ENST00000479478 690 ntBASIC4.84□□□□□ -1.63
UBE3BQ7Z3V4 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC4.84□□□□□ -1.63
UBE3BQ7Z3V4 LARP1BP2-201ENST00000486594 519 ntBASIC4.84□□□□□ -1.63
UBE3BQ7Z3V4 RPL31P61-201ENST00000496160 376 ntBASIC4.84□□□□□ -1.63
UBE3BQ7Z3V4 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
UBE3BQ7Z3V4 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
UBE3BQ7Z3V4 RN7SKP244-201ENST00000516513 307 ntBASIC4.84□□□□□ -1.63
UBE3BQ7Z3V4 PAICSP4-201ENST00000517543 1253 ntBASIC4.84□□□□□ -1.63
UBE3BQ7Z3V4 AC022695.1-201ENST00000522089 237 ntBASIC4.84□□□□□ -1.63
UBE3BQ7Z3V4 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC4.84□□□□□ -1.63
UBE3BQ7Z3V4 CFL2-206ENST00000556161 546 ntTSL 4 BASIC4.84□□□□□ -1.63
UBE3BQ7Z3V4 AL133241.1-201ENST00000556832 487 ntBASIC4.84□□□□□ -1.63
UBE3BQ7Z3V4 ZNF519P2-201ENST00000557032 169 ntBASIC4.84□□□□□ -1.63
UBE3BQ7Z3V4 EIF5A2P1-201ENST00000564027 460 ntBASIC4.84□□□□□ -1.63
UBE3BQ7Z3V4 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC4.84□□□□□ -1.63
UBE3BQ7Z3V4 MIR4637-201ENST00000582405 84 ntBASIC4.84□□□□□ -1.63
UBE3BQ7Z3V4 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.84□□□□□ -1.63
UBE3BQ7Z3V4 AL022154.1-201ENST00000604698 785 ntBASIC4.84□□□□□ -1.63
UBE3BQ7Z3V4 AC012603.1-201ENST00000606424 528 ntBASIC4.84□□□□□ -1.63
UBE3BQ7Z3V4 CRYM-AS1-204ENST00000637983 556 ntBASIC4.84□□□□□ -1.63
UBE3BQ7Z3V4 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.84□□□□□ -1.63
UBE3BQ7Z3V4 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
UBE3BQ7Z3V4 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
UBE3BQ7Z3V4 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
UBE3BQ7Z3V4 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
UBE3BQ7Z3V4 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.84□□□□□ -1.64
UBE3BQ7Z3V4 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
UBE3BQ7Z3V4 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
UBE3BQ7Z3V4 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
UBE3BQ7Z3V4 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC4.83□□□□□ -1.64
UBE3BQ7Z3V4 AC027290.2-201ENST00000623210 18662 ntBASIC4.83□□□□□ -1.64
UBE3BQ7Z3V4 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
UBE3BQ7Z3V4 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
UBE3BQ7Z3V4 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
UBE3BQ7Z3V4 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
UBE3BQ7Z3V4 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.83□□□□□ -1.64
UBE3BQ7Z3V4 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
UBE3BQ7Z3V4 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
UBE3BQ7Z3V4 MIR199A2-201ENST00000385289 110 ntBASIC4.83□□□□□ -1.64
UBE3BQ7Z3V4 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
UBE3BQ7Z3V4 SNRPEP2-201ENST00000397592 279 ntBASIC4.83□□□□□ -1.64
UBE3BQ7Z3V4 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC4.83□□□□□ -1.64
UBE3BQ7Z3V4 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 87.3 ms