Protein–RNA interactions for Protein: Q05086

UBE3A, Ubiquitin-protein ligase E3A, humanhuman

Predictions only

Length 875 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3AQ05086 C2orf27A-204ENST00000623058 969 ntBASIC4.2□□□□□ -1.74
UBE3AQ05086 PCMTD1P7-201ENST00000634506 357 ntBASIC4.2□□□□□ -1.74
UBE3AQ05086 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
UBE3AQ05086 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
UBE3AQ05086 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
UBE3AQ05086 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
UBE3AQ05086 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.2□□□□□ -1.74
UBE3AQ05086 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
UBE3AQ05086 AL157700.1-201ENST00000561973 1432 ntBASIC4.2□□□□□ -1.74
UBE3AQ05086 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC4.2□□□□□ -1.74
UBE3AQ05086 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
UBE3AQ05086 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC4.2□□□□□ -1.74
UBE3AQ05086 OR11H5P-202ENST00000641612 1325 ntBASIC4.2□□□□□ -1.74
UBE3AQ05086 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
UBE3AQ05086 PAPPA-AS1-201ENST00000445861 2450 ntBASIC4.19□□□□□ -1.74
UBE3AQ05086 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
UBE3AQ05086 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
UBE3AQ05086 AC073346.2-201ENST00000624724 2058 ntBASIC4.19□□□□□ -1.74
UBE3AQ05086 RNU1-15P-201ENST00000353977 144 ntBASIC4.19□□□□□ -1.74
UBE3AQ05086 RNA5SP399-201ENST00000364003 117 ntBASIC4.19□□□□□ -1.74
UBE3AQ05086 RNU6-553P-201ENST00000364047 96 ntBASIC4.19□□□□□ -1.74
UBE3AQ05086 SNORD116-8-201ENST00000384365 95 ntBASIC4.19□□□□□ -1.74
UBE3AQ05086 PTMAP5-201ENST00000393073 333 ntBASIC4.19□□□□□ -1.74
UBE3AQ05086 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC4.19□□□□□ -1.74
UBE3AQ05086 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC4.19□□□□□ -1.74
UBE3AQ05086 PGBD4P8-201ENST00000412993 562 ntBASIC4.19□□□□□ -1.74
UBE3AQ05086 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC4.19□□□□□ -1.74
UBE3AQ05086 AC009237.5-201ENST00000414271 501 ntBASIC4.19□□□□□ -1.74
UBE3AQ05086 RPS23P10-201ENST00000416185 486 ntBASIC4.19□□□□□ -1.74
UBE3AQ05086 PRELID3BP10-201ENST00000431957 584 ntBASIC4.19□□□□□ -1.74
UBE3AQ05086 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC4.19□□□□□ -1.74
UBE3AQ05086 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC4.19□□□□□ -1.74
UBE3AQ05086 ZNF736P5Y-201ENST00000451173 805 ntBASIC4.19□□□□□ -1.74
UBE3AQ05086 AL353691.1-201ENST00000451332 387 ntBASIC4.19□□□□□ -1.74
UBE3AQ05086 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC4.19□□□□□ -1.74
UBE3AQ05086 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC4.19□□□□□ -1.74
UBE3AQ05086 BET1P1-201ENST00000482276 359 ntBASIC4.19□□□□□ -1.74
UBE3AQ05086 AC078918.1-201ENST00000498515 228 ntBASIC4.19□□□□□ -1.74
UBE3AQ05086 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.19□□□□□ -1.74
UBE3AQ05086 AC111000.2-201ENST00000507775 550 ntBASIC4.19□□□□□ -1.74
UBE3AQ05086 AC093677.1-201ENST00000514414 678 ntBASIC4.19□□□□□ -1.74
UBE3AQ05086 RNA5SP154-201ENST00000516193 111 ntBASIC4.19□□□□□ -1.74
UBE3AQ05086 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC4.19□□□□□ -1.74
UBE3AQ05086 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
UBE3AQ05086 MTCO1P47-201ENST00000523889 1271 ntBASIC4.19□□□□□ -1.74
UBE3AQ05086 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
UBE3AQ05086 MTCYBP41-201ENST00000528913 1123 ntBASIC4.19□□□□□ -1.74
UBE3AQ05086 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC4.19□□□□□ -1.74
UBE3AQ05086 VBP1-203ENST00000535916 944 ntTSL 2 BASIC4.19□□□□□ -1.74
UBE3AQ05086 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.19□□□□□ -1.74
UBE3AQ05086 AC126177.3-201ENST00000551839 688 ntBASIC4.19□□□□□ -1.74
UBE3AQ05086 SETP7-201ENST00000552169 453 ntBASIC4.19□□□□□ -1.74
UBE3AQ05086 AL121603.1-201ENST00000553815 142 ntBASIC4.19□□□□□ -1.74
UBE3AQ05086 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC4.19□□□□□ -1.74
UBE3AQ05086 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC4.19□□□□□ -1.74
UBE3AQ05086 AL353997.4-201ENST00000586196 166 ntBASIC4.19□□□□□ -1.74
UBE3AQ05086 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC4.19□□□□□ -1.74
UBE3AQ05086 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
UBE3AQ05086 AL357559.1-201ENST00000622228 274 ntBASIC4.19□□□□□ -1.74
UBE3AQ05086 AF246928.1-201ENST00000623768 87 ntBASIC4.19□□□□□ -1.74
UBE3AQ05086 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
UBE3AQ05086 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.19□□□□□ -1.74
UBE3AQ05086 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
UBE3AQ05086 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
UBE3AQ05086 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
UBE3AQ05086 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.18□□□□□ -1.74
UBE3AQ05086 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
UBE3AQ05086 RNU6-660P-201ENST00000364566 109 ntBASIC4.18□□□□□ -1.74
UBE3AQ05086 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
UBE3AQ05086 AL138880.1-201ENST00000405824 642 ntBASIC4.18□□□□□ -1.74
UBE3AQ05086 MIR1251-201ENST00000408552 70 ntBASIC4.18□□□□□ -1.74
UBE3AQ05086 RNA5SP104-201ENST00000410989 118 ntBASIC4.18□□□□□ -1.74
UBE3AQ05086 RNA5SP39-201ENST00000411245 120 ntBASIC4.18□□□□□ -1.74
UBE3AQ05086 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.18□□□□□ -1.74
UBE3AQ05086 HMGB1P11-201ENST00000413899 637 ntBASIC4.18□□□□□ -1.74
UBE3AQ05086 RPS7P15-201ENST00000415804 584 ntBASIC4.18□□□□□ -1.74
UBE3AQ05086 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC4.18□□□□□ -1.74
UBE3AQ05086 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC4.18□□□□□ -1.74
UBE3AQ05086 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC4.18□□□□□ -1.74
UBE3AQ05086 AC091390.3-201ENST00000426478 338 ntBASIC4.18□□□□□ -1.74
UBE3AQ05086 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC4.18□□□□□ -1.74
UBE3AQ05086 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC4.18□□□□□ -1.74
UBE3AQ05086 HMGN2P31-201ENST00000432430 273 ntBASIC4.18□□□□□ -1.74
UBE3AQ05086 LSM1P1-201ENST00000438629 273 ntBASIC4.18□□□□□ -1.74
UBE3AQ05086 AL831737.1-201ENST00000441288 271 ntBASIC4.18□□□□□ -1.74
UBE3AQ05086 PRDX3P3-201ENST00000447765 522 ntBASIC4.18□□□□□ -1.74
UBE3AQ05086 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
UBE3AQ05086 HMGB1P36-201ENST00000487709 576 ntBASIC4.18□□□□□ -1.74
UBE3AQ05086 AC106872.3-201ENST00000495104 446 ntBASIC4.18□□□□□ -1.74
UBE3AQ05086 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC4.18□□□□□ -1.74
UBE3AQ05086 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC4.18□□□□□ -1.74
UBE3AQ05086 AC005178.1-201ENST00000508392 440 ntBASIC4.18□□□□□ -1.74
UBE3AQ05086 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC4.18□□□□□ -1.74
UBE3AQ05086 RNA5SP164-201ENST00000516533 110 ntBASIC4.18□□□□□ -1.74
UBE3AQ05086 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC4.18□□□□□ -1.74
UBE3AQ05086 AC068587.4-201ENST00000533893 186 ntBASIC4.18□□□□□ -1.74
UBE3AQ05086 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC4.18□□□□□ -1.74
UBE3AQ05086 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC4.18□□□□□ -1.74
UBE3AQ05086 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC4.18□□□□□ -1.74
UBE3AQ05086 AC006270.2-201ENST00000578523 652 ntBASIC4.18□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms