Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 AL590004.2-201ENST00000404787 371 ntBASIC3.58□□□□□ -1.84
RIPK4P57078 RPL7P10-201ENST00000417407 739 ntBASIC3.58□□□□□ -1.84
RIPK4P57078 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC3.58□□□□□ -1.84
RIPK4P57078 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC3.58□□□□□ -1.84
RIPK4P57078 RPL39P40-201ENST00000445481 146 ntBASIC3.58□□□□□ -1.84
RIPK4P57078 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC3.58□□□□□ -1.84
RIPK4P57078 AC005002.1-201ENST00000447458 540 ntBASIC3.58□□□□□ -1.84
RIPK4P57078 HMGN1P5-201ENST00000448591 263 ntBASIC3.58□□□□□ -1.84
RIPK4P57078 RPS26P21-201ENST00000475397 348 ntBASIC3.58□□□□□ -1.84
RIPK4P57078 AC090071.1-201ENST00000507713 644 ntBASIC3.58□□□□□ -1.84
RIPK4P57078 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC3.58□□□□□ -1.84
RIPK4P57078 LY96-202ENST00000518893 430 ntTSL 3 BASIC3.58□□□□□ -1.84
RIPK4P57078 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC3.58□□□□□ -1.84
RIPK4P57078 AP000916.1-201ENST00000533869 835 ntBASIC3.58□□□□□ -1.84
RIPK4P57078 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC3.58□□□□□ -1.84
RIPK4P57078 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC3.58□□□□□ -1.84
RIPK4P57078 HMGB1P6-201ENST00000569046 646 ntBASIC3.58□□□□□ -1.84
RIPK4P57078 BNIP3P27-201ENST00000599991 412 ntBASIC3.58□□□□□ -1.84
RIPK4P57078 BNIP3P31-201ENST00000604515 566 ntBASIC3.58□□□□□ -1.84
RIPK4P57078 AC007619.2-201ENST00000605743 379 ntBASIC3.58□□□□□ -1.84
RIPK4P57078 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC3.58□□□□□ -1.84
RIPK4P57078 MIR8084-201ENST00000614105 89 ntBASIC3.58□□□□□ -1.84
RIPK4P57078 AC073348.1-201ENST00000623002 331 ntBASIC3.58□□□□□ -1.84
RIPK4P57078 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
RIPK4P57078 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC3.57□□□□□ -1.84
RIPK4P57078 Y_RNA.111-201ENST00000363248 100 ntBASIC3.57□□□□□ -1.84
RIPK4P57078 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC3.57□□□□□ -1.84
RIPK4P57078 MIR887-201ENST00000401258 79 ntBASIC3.57□□□□□ -1.84
RIPK4P57078 AL356057.3-201ENST00000402607 340 ntBASIC3.57□□□□□ -1.84
RIPK4P57078 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC3.57□□□□□ -1.84
RIPK4P57078 UBE2D3P3-201ENST00000426992 425 ntBASIC3.57□□□□□ -1.84
RIPK4P57078 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC3.57□□□□□ -1.84
RIPK4P57078 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC3.57□□□□□ -1.84
RIPK4P57078 SNORD109B-201ENST00000458961 67 ntBASIC3.57□□□□□ -1.84
RIPK4P57078 SNORD109A-201ENST00000459128 67 ntBASIC3.57□□□□□ -1.84
RIPK4P57078 AC093801.2-201ENST00000503966 1050 ntBASIC3.57□□□□□ -1.84
RIPK4P57078 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC3.57□□□□□ -1.84
RIPK4P57078 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.57□□□□□ -1.84
RIPK4P57078 AC110792.2-201ENST00000510278 224 ntBASIC3.57□□□□□ -1.84
RIPK4P57078 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC3.57□□□□□ -1.84
RIPK4P57078 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.57□□□□□ -1.84
RIPK4P57078 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.57□□□□□ -1.84
RIPK4P57078 AC139103.1-201ENST00000534696 1030 ntBASIC3.57□□□□□ -1.84
RIPK4P57078 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC3.57□□□□□ -1.84
RIPK4P57078 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC3.57□□□□□ -1.84
RIPK4P57078 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC3.57□□□□□ -1.84
RIPK4P57078 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.57□□□□□ -1.84
RIPK4P57078 CASC16-202ENST00000563844 610 ntTSL 3 BASIC3.57□□□□□ -1.84
RIPK4P57078 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.57□□□□□ -1.84
RIPK4P57078 AC126365.2-201ENST00000580630 379 ntBASIC3.57□□□□□ -1.84
RIPK4P57078 AC124283.4-201ENST00000581815 456 ntBASIC3.57□□□□□ -1.84
RIPK4P57078 MIR3605-201ENST00000583214 100 ntBASIC3.57□□□□□ -1.84
RIPK4P57078 VN1R9P-201ENST00000614184 867 ntBASIC3.57□□□□□ -1.84
RIPK4P57078 SCARNA15.3-201ENST00000626315 122 ntBASIC3.57□□□□□ -1.84
RIPK4P57078 SCARNA4.1-201ENST00000628597 123 ntBASIC3.57□□□□□ -1.84
RIPK4P57078 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.57□□□□□ -1.84
RIPK4P57078 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.56□□□□□ -1.84
RIPK4P57078 NSRP1P1-201ENST00000444067 1693 ntBASIC3.56□□□□□ -1.84
RIPK4P57078 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC3.56□□□□□ -1.84
RIPK4P57078 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
RIPK4P57078 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
RIPK4P57078 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
RIPK4P57078 AC062016.1-201ENST00000355719 319 ntBASIC3.56□□□□□ -1.84
RIPK4P57078 RNA5SP391-201ENST00000363456 119 ntBASIC3.56□□□□□ -1.84
RIPK4P57078 RNU6-1339P-201ENST00000363574 91 ntBASIC3.56□□□□□ -1.84
RIPK4P57078 MIR9-1-201ENST00000385198 89 ntBASIC3.56□□□□□ -1.84
RIPK4P57078 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
RIPK4P57078 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
RIPK4P57078 AL035405.1-201ENST00000400795 710 ntBASIC3.56□□□□□ -1.84
RIPK4P57078 ATP5F1P6-201ENST00000402768 767 ntBASIC3.56□□□□□ -1.84
RIPK4P57078 ATF1P1-201ENST00000406040 927 ntBASIC3.56□□□□□ -1.84
RIPK4P57078 RNU2-21P-201ENST00000410368 188 ntBASIC3.56□□□□□ -1.84
RIPK4P57078 MTCO1P43-201ENST00000431831 488 ntBASIC3.56□□□□□ -1.84
RIPK4P57078 SETP8-201ENST00000435341 628 ntBASIC3.56□□□□□ -1.84
RIPK4P57078 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC3.56□□□□□ -1.84
RIPK4P57078 HMGB1P48-201ENST00000446155 598 ntBASIC3.56□□□□□ -1.84
RIPK4P57078 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC3.56□□□□□ -1.84
RIPK4P57078 GSTA11P-201ENST00000452866 669 ntBASIC3.56□□□□□ -1.84
RIPK4P57078 MRPL35P4-201ENST00000453682 566 ntBASIC3.56□□□□□ -1.84
RIPK4P57078 RPL9P33-201ENST00000484311 566 ntBASIC3.56□□□□□ -1.84
RIPK4P57078 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC3.56□□□□□ -1.84
RIPK4P57078 AC121161.1-201ENST00000510606 652 ntBASIC3.56□□□□□ -1.84
RIPK4P57078 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC3.56□□□□□ -1.84
RIPK4P57078 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC3.56□□□□□ -1.84
RIPK4P57078 AC074029.1-201ENST00000552531 1044 ntBASIC3.56□□□□□ -1.84
RIPK4P57078 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.56□□□□□ -1.84
RIPK4P57078 ATP5F1P7-201ENST00000567330 760 ntBASIC3.56□□□□□ -1.84
RIPK4P57078 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC3.56□□□□□ -1.84
RIPK4P57078 AL035413.2-201ENST00000604801 525 ntBASIC3.56□□□□□ -1.84
RIPK4P57078 AC120053.1-201ENST00000607706 736 ntBASIC3.56□□□□□ -1.84
RIPK4P57078 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC3.56□□□□□ -1.84
RIPK4P57078 AL355816.2-201ENST00000610049 647 ntBASIC3.56□□□□□ -1.84
RIPK4P57078 AC096586.1-201ENST00000610267 561 ntBASIC3.56□□□□□ -1.84
RIPK4P57078 AC104763.3-201ENST00000613765 618 ntBASIC3.56□□□□□ -1.84
RIPK4P57078 AC018926.3-201ENST00000618841 406 ntBASIC3.56□□□□□ -1.84
RIPK4P57078 AL049777.1-201ENST00000622740 518 ntBASIC3.56□□□□□ -1.84
RIPK4P57078 AC092608.3-201ENST00000625017 386 ntBASIC3.56□□□□□ -1.84
RIPK4P57078 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC3.56□□□□□ -1.84
RIPK4P57078 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC3.56□□□□□ -1.84
RIPK4P57078 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 109.6 ms