Protein–RNA interactions for Protein: P52435

POLR2J, DNA-directed RNA polymerase II subunit RPB11-a, humanhuman

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2JP52435 AC006386.2-201ENST00000624491 75 ntBASIC2.14□□□□□ -2.07
POLR2JP52435 AC012005.1-201ENST00000624575 75 ntBASIC2.14□□□□□ -2.07
POLR2JP52435 AP001002.2-201ENST00000625137 386 ntBASIC2.14□□□□□ -2.07
POLR2JP52435 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC2.13□□□□□ -2.07
POLR2JP52435 SNORA7.2-201ENST00000364446 145 ntBASIC2.13□□□□□ -2.07
POLR2JP52435 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC2.13□□□□□ -2.07
POLR2JP52435 AC109780.2-201ENST00000413467 845 ntBASIC2.13□□□□□ -2.07
POLR2JP52435 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC2.13□□□□□ -2.07
POLR2JP52435 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC2.13□□□□□ -2.07
POLR2JP52435 WARS2P1-201ENST00000429678 537 ntBASIC2.13□□□□□ -2.07
POLR2JP52435 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC2.13□□□□□ -2.07
POLR2JP52435 AL031659.1-201ENST00000447075 539 ntBASIC2.13□□□□□ -2.07
POLR2JP52435 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC2.13□□□□□ -2.07
POLR2JP52435 AP001960.1-201ENST00000506494 658 ntBASIC2.13□□□□□ -2.07
POLR2JP52435 RPL7L1P13-201ENST00000511702 739 ntBASIC2.13□□□□□ -2.07
POLR2JP52435 MTCYBP20-201ENST00000524239 1129 ntBASIC2.13□□□□□ -2.07
POLR2JP52435 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC2.13□□□□□ -2.07
POLR2JP52435 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.13□□□□□ -2.07
POLR2JP52435 BDH2P1-201ENST00000602288 736 ntBASIC2.13□□□□□ -2.07
POLR2JP52435 SNORA35B-201ENST00000607417 129 ntBASIC2.13□□□□□ -2.07
POLR2JP52435 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC2.13□□□□□ -2.07
POLR2JP52435 AL390240.1-201ENST00000612950 384 ntBASIC2.13□□□□□ -2.07
POLR2JP52435 AC009831.4-201ENST00000620744 325 ntBASIC2.13□□□□□ -2.07
POLR2JP52435 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
POLR2JP52435 AC091046.2-201ENST00000620775 665 ntBASIC2.13□□□□□ -2.07
POLR2JP52435 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
POLR2JP52435 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.13□□□□□ -2.07
POLR2JP52435 AC008432.1-201ENST00000615912 1320 ntBASIC2.13□□□□□ -2.07
POLR2JP52435 Z99496.1-201ENST00000469424 1477 ntBASIC2.13□□□□□ -2.07
POLR2JP52435 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC2.12□□□□□ -2.07
POLR2JP52435 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
POLR2JP52435 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
POLR2JP52435 MIR491-201ENST00000384877 84 ntBASIC2.12□□□□□ -2.07
POLR2JP52435 FO393413.1-201ENST00000402892 195 ntBASIC2.12□□□□□ -2.07
POLR2JP52435 AL356057.2-201ENST00000403318 432 ntBASIC2.12□□□□□ -2.07
POLR2JP52435 EI24P1-201ENST00000416584 867 ntBASIC2.12□□□□□ -2.07
POLR2JP52435 TOMM22P1-201ENST00000418578 312 ntBASIC2.12□□□□□ -2.07
POLR2JP52435 AC244098.2-201ENST00000422068 99 ntBASIC2.12□□□□□ -2.07
POLR2JP52435 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC2.12□□□□□ -2.07
POLR2JP52435 RPL23AP33-201ENST00000442301 452 ntBASIC2.12□□□□□ -2.07
POLR2JP52435 AC104472.2-201ENST00000469035 601 ntBASIC2.12□□□□□ -2.07
POLR2JP52435 RPS4XP6-201ENST00000477670 797 ntBASIC2.12□□□□□ -2.07
POLR2JP52435 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC2.12□□□□□ -2.07
POLR2JP52435 RN7SL636P-201ENST00000497504 294 ntBASIC2.12□□□□□ -2.07
POLR2JP52435 GTF2IP9-201ENST00000502460 301 ntBASIC2.12□□□□□ -2.07
POLR2JP52435 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
POLR2JP52435 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC2.12□□□□□ -2.07
POLR2JP52435 AC093755.1-201ENST00000512950 1023 ntBASIC2.12□□□□□ -2.07
POLR2JP52435 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC2.12□□□□□ -2.07
POLR2JP52435 OR6C73P-201ENST00000546432 358 ntBASIC2.12□□□□□ -2.07
POLR2JP52435 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC2.12□□□□□ -2.07
POLR2JP52435 AC027176.1-201ENST00000560204 514 ntBASIC2.12□□□□□ -2.07
POLR2JP52435 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC2.12□□□□□ -2.07
POLR2JP52435 AC022069.1-201ENST00000582910 658 ntBASIC2.12□□□□□ -2.07
POLR2JP52435 AC115085.1-201ENST00000588924 229 ntBASIC2.12□□□□□ -2.07
POLR2JP52435 AC107294.1-201ENST00000609524 467 ntBASIC2.12□□□□□ -2.07
POLR2JP52435 AC006023.2-201ENST00000609916 167 ntBASIC2.12□□□□□ -2.07
POLR2JP52435 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.12□□□□□ -2.07
POLR2JP52435 AC015726.3-201ENST00000624501 418 ntBASIC2.12□□□□□ -2.07
POLR2JP52435 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC2.12□□□□□ -2.07
POLR2JP52435 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC2.12□□□□□ -2.07
POLR2JP52435 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.12□□□□□ -2.07
POLR2JP52435 AC073055.1-201ENST00000456901 1621 ntBASIC2.12□□□□□ -2.07
POLR2JP52435 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
POLR2JP52435 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
POLR2JP52435 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.11□□□□□ -2.07
POLR2JP52435 CD24P4-201ENST00000382840 243 ntBASIC2.11□□□□□ -2.07
POLR2JP52435 SNORA67.4-201ENST00000384688 142 ntBASIC2.11□□□□□ -2.07
POLR2JP52435 EIF4EBP2P3-201ENST00000403144 334 ntBASIC2.11□□□□□ -2.07
POLR2JP52435 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.11□□□□□ -2.07
POLR2JP52435 HMGB1P11-201ENST00000413899 637 ntBASIC2.11□□□□□ -2.07
POLR2JP52435 AC107081.1-201ENST00000414975 361 ntBASIC2.11□□□□□ -2.07
POLR2JP52435 CKS1BP5-201ENST00000434172 273 ntBASIC2.11□□□□□ -2.07
POLR2JP52435 RPL21P112-201ENST00000434403 463 ntBASIC2.11□□□□□ -2.07
POLR2JP52435 TPMTP4-201ENST00000450749 678 ntBASIC2.11□□□□□ -2.07
POLR2JP52435 SETP6-201ENST00000479329 568 ntBASIC2.11□□□□□ -2.07
POLR2JP52435 AC109486.1-201ENST00000486833 374 ntBASIC2.11□□□□□ -2.07
POLR2JP52435 C1GALT1P2-201ENST00000510813 1104 ntBASIC2.11□□□□□ -2.07
POLR2JP52435 RNU4-29P-201ENST00000515943 174 ntBASIC2.11□□□□□ -2.07
POLR2JP52435 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC2.11□□□□□ -2.07
POLR2JP52435 AKIRIN1P1-201ENST00000547384 544 ntBASIC2.11□□□□□ -2.07
POLR2JP52435 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
POLR2JP52435 LARP7P3-201ENST00000579888 337 ntBASIC2.11□□□□□ -2.07
POLR2JP52435 SNRPGP15-201ENST00000600149 222 ntBASIC2.11□□□□□ -2.07
POLR2JP52435 AL121917.1-203ENST00000605534 577 ntBASIC2.11□□□□□ -2.07
POLR2JP52435 HSPE1P14-201ENST00000605812 302 ntBASIC2.11□□□□□ -2.07
POLR2JP52435 AC090897.3-201ENST00000636973 1157 ntBASIC2.11□□□□□ -2.07
POLR2JP52435 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.11□□□□□ -2.07
POLR2JP52435 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC2.11□□□□□ -2.07
POLR2JP52435 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
POLR2JP52435 MTCO1P6-201ENST00000481192 1384 ntBASIC2.1□□□□□ -2.07
POLR2JP52435 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
POLR2JP52435 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.1□□□□□ -2.07
POLR2JP52435 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
POLR2JP52435 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
POLR2JP52435 Y_RNA.62-201ENST00000362840 99 ntBASIC2.1□□□□□ -2.07
POLR2JP52435 RNA5SP391-201ENST00000363456 119 ntBASIC2.1□□□□□ -2.07
POLR2JP52435 RNU6-666P-201ENST00000363499 107 ntBASIC2.1□□□□□ -2.07
POLR2JP52435 SNORA80A-201ENST00000363922 136 ntBASIC2.1□□□□□ -2.07
POLR2JP52435 RNU6-1251P-201ENST00000364502 107 ntBASIC2.1□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 182 ms