Protein–RNA interactions for Protein: P20700

LMNB1, Lamin-B1, humanhuman

Predictions only

Length 586 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1P20700 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC5.75□□□□□ -1.49
LMNB1P20700 AC011712.1-201ENST00000588959 234 ntBASIC5.75□□□□□ -1.49
LMNB1P20700 IGKV1OR2-118-201ENST00000603238 347 ntBASIC5.75□□□□□ -1.49
LMNB1P20700 AC138965.3-201ENST00000623875 498 ntBASIC5.75□□□□□ -1.49
LMNB1P20700 U3.53-201ENST00000628922 216 ntBASIC5.75□□□□□ -1.49
LMNB1P20700 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC5.75□□□□□ -1.49
LMNB1P20700 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC5.75□□□□□ -1.49
LMNB1P20700 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
LMNB1P20700 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC5.75□□□□□ -1.49
LMNB1P20700 AC010300.1-201ENST00000600671 5134 ntBASIC5.75□□□□□ -1.49
LMNB1P20700 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
LMNB1P20700 AC008079.2-201ENST00000623543 20396 ntBASIC5.75□□□□□ -1.49
LMNB1P20700 PHKBP1-201ENST00000450951 1951 ntBASIC5.75□□□□□ -1.49
LMNB1P20700 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
LMNB1P20700 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
LMNB1P20700 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
LMNB1P20700 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.74□□□□□ -1.49
LMNB1P20700 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
LMNB1P20700 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
LMNB1P20700 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
LMNB1P20700 RNU6-28P-201ENST00000362378 107 ntBASIC5.74□□□□□ -1.49
LMNB1P20700 SNORA62.3-201ENST00000365110 153 ntBASIC5.74□□□□□ -1.49
LMNB1P20700 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC5.74□□□□□ -1.49
LMNB1P20700 AL356421.1-201ENST00000403255 413 ntBASIC5.74□□□□□ -1.49
LMNB1P20700 PPIAP31-201ENST00000405422 495 ntBASIC5.74□□□□□ -1.49
LMNB1P20700 AL356432.1-201ENST00000405809 419 ntBASIC5.74□□□□□ -1.49
LMNB1P20700 RNA5SP118-201ENST00000410385 109 ntBASIC5.74□□□□□ -1.49
LMNB1P20700 RN7SKP202-201ENST00000410439 330 ntBASIC5.74□□□□□ -1.49
LMNB1P20700 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC5.74□□□□□ -1.49
LMNB1P20700 RPL6P29-201ENST00000414863 865 ntBASIC5.74□□□□□ -1.49
LMNB1P20700 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC5.74□□□□□ -1.49
LMNB1P20700 RPL31P45-201ENST00000419532 356 ntBASIC5.74□□□□□ -1.49
LMNB1P20700 AL031736.2-201ENST00000426573 787 ntBASIC5.74□□□□□ -1.49
LMNB1P20700 AC006548.1-201ENST00000427470 102 ntBASIC5.74□□□□□ -1.49
LMNB1P20700 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC5.74□□□□□ -1.49
LMNB1P20700 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC5.74□□□□□ -1.49
LMNB1P20700 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC5.74□□□□□ -1.49
LMNB1P20700 PLGLA-201ENST00000465668 449 ntBASIC5.74□□□□□ -1.49
LMNB1P20700 RN7SL542P-201ENST00000467147 294 ntBASIC5.74□□□□□ -1.49
LMNB1P20700 RPL36AP41-201ENST00000493820 306 ntBASIC5.74□□□□□ -1.49
LMNB1P20700 RN7SL558P-201ENST00000497468 299 ntBASIC5.74□□□□□ -1.49
LMNB1P20700 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC5.74□□□□□ -1.49
LMNB1P20700 TXNP6-201ENST00000510190 310 ntBASIC5.74□□□□□ -1.49
LMNB1P20700 RNA5SP401-201ENST00000515920 127 ntBASIC5.74□□□□□ -1.49
LMNB1P20700 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC5.74□□□□□ -1.49
LMNB1P20700 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC5.74□□□□□ -1.49
LMNB1P20700 PHBP17-201ENST00000528576 541 ntBASIC5.74□□□□□ -1.49
LMNB1P20700 SNORA74C-1-201ENST00000580726 201 ntBASIC5.74□□□□□ -1.49
LMNB1P20700 Z84480.1-201ENST00000605131 311 ntBASIC5.74□□□□□ -1.49
LMNB1P20700 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC5.74□□□□□ -1.49
LMNB1P20700 AL132765.2-201ENST00000610812 351 ntBASIC5.74□□□□□ -1.49
LMNB1P20700 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC5.74□□□□□ -1.49
LMNB1P20700 MIR6075-201ENST00000620782 95 ntBASIC5.74□□□□□ -1.49
LMNB1P20700 FRG1KP-201ENST00000623592 341 ntBASIC5.74□□□□□ -1.49
LMNB1P20700 CR381572.1-201ENST00000625098 102 ntBASIC5.74□□□□□ -1.49
LMNB1P20700 MIR3653-201ENST00000625572 110 ntBASIC5.74□□□□□ -1.49
LMNB1P20700 VPS8-228ENST00000628962 207 ntTSL 5 BASIC5.74□□□□□ -1.49
LMNB1P20700 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
LMNB1P20700 ST7-212ENST00000422922 1887 ntTSL 5 BASIC5.74□□□□□ -1.49
LMNB1P20700 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
LMNB1P20700 EEF1A1P42-201ENST00000613436 1331 ntBASIC5.74□□□□□ -1.49
LMNB1P20700 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
LMNB1P20700 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
LMNB1P20700 AL450326.2-201ENST00000421913 1962 ntBASIC5.73□□□□□ -1.49
LMNB1P20700 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
LMNB1P20700 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
LMNB1P20700 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC5.73□□□□□ -1.49
LMNB1P20700 AL161781.1-201ENST00000354277 403 ntBASIC5.73□□□□□ -1.49
LMNB1P20700 FRG1CP-201ENST00000358464 769 ntBASIC5.73□□□□□ -1.49
LMNB1P20700 RNU6-1120P-201ENST00000362988 108 ntBASIC5.73□□□□□ -1.49
LMNB1P20700 Y_RNA.394-201ENST00000383942 103 ntBASIC5.73□□□□□ -1.49
LMNB1P20700 Y_RNA.548-201ENST00000384656 105 ntBASIC5.73□□□□□ -1.49
LMNB1P20700 RPL31P52-201ENST00000407532 367 ntBASIC5.73□□□□□ -1.49
LMNB1P20700 COX5BP7-201ENST00000414780 274 ntBASIC5.73□□□□□ -1.49
LMNB1P20700 AC073136.2-201ENST00000417282 849 ntBASIC5.73□□□□□ -1.49
LMNB1P20700 HMGN2P27-201ENST00000427352 270 ntBASIC5.73□□□□□ -1.49
LMNB1P20700 AC011998.1-201ENST00000433403 117 ntBASIC5.73□□□□□ -1.49
LMNB1P20700 AL132765.1-201ENST00000434165 553 ntBASIC5.73□□□□□ -1.49
LMNB1P20700 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC5.73□□□□□ -1.49
LMNB1P20700 BNIP3P2-201ENST00000441221 577 ntBASIC5.73□□□□□ -1.49
LMNB1P20700 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC5.73□□□□□ -1.49
LMNB1P20700 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC5.73□□□□□ -1.49
LMNB1P20700 PRPF38AP1-201ENST00000451976 933 ntBASIC5.73□□□□□ -1.49
LMNB1P20700 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC5.73□□□□□ -1.49
LMNB1P20700 AC079168.2-201ENST00000453977 416 ntBASIC5.73□□□□□ -1.49
LMNB1P20700 AP1S2P1-201ENST00000457344 379 ntBASIC5.73□□□□□ -1.49
LMNB1P20700 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC5.73□□□□□ -1.49
LMNB1P20700 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC5.73□□□□□ -1.49
LMNB1P20700 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC5.73□□□□□ -1.49
LMNB1P20700 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC5.73□□□□□ -1.49
LMNB1P20700 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
LMNB1P20700 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC5.73□□□□□ -1.49
LMNB1P20700 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC5.73□□□□□ -1.49
LMNB1P20700 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC5.73□□□□□ -1.49
LMNB1P20700 AC040958.1-201ENST00000561102 201 ntBASIC5.73□□□□□ -1.49
LMNB1P20700 RN7SL176P-201ENST00000580352 264 ntBASIC5.73□□□□□ -1.49
LMNB1P20700 PRPF19P1-201ENST00000584766 898 ntBASIC5.73□□□□□ -1.49
LMNB1P20700 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC5.73□□□□□ -1.49
LMNB1P20700 AC024220.1-201ENST00000603675 484 ntBASIC5.73□□□□□ -1.49
LMNB1P20700 AC115621.1-201ENST00000604653 858 ntBASIC5.73□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms