Protein–RNA interactions for Protein: P18433

PTPRA, Receptor-type tyrosine-protein phosphatase alpha, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRAP18433 Y_RNA.148-201ENST00000363557 117 ntBASIC5.72□□□□□ -1.49
PTPRAP18433 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
PTPRAP18433 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
PTPRAP18433 U3.20-201ENST00000390909 217 ntBASIC5.72□□□□□ -1.49
PTPRAP18433 AL121834.1-202ENST00000404494 277 ntBASIC5.72□□□□□ -1.49
PTPRAP18433 RPL23AP1-201ENST00000428990 471 ntBASIC5.72□□□□□ -1.49
PTPRAP18433 AC108734.1-201ENST00000439549 399 ntBASIC5.72□□□□□ -1.49
PTPRAP18433 RPL23AP11-201ENST00000475260 469 ntBASIC5.72□□□□□ -1.49
PTPRAP18433 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC5.72□□□□□ -1.49
PTPRAP18433 AC126389.1-201ENST00000477436 290 ntBASIC5.72□□□□□ -1.49
PTPRAP18433 AL049874.2-201ENST00000492636 288 ntBASIC5.72□□□□□ -1.49
PTPRAP18433 MTCO2P24-201ENST00000515611 426 ntBASIC5.72□□□□□ -1.49
PTPRAP18433 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.72□□□□□ -1.49
PTPRAP18433 PARP1P2-201ENST00000556806 195 ntBASIC5.72□□□□□ -1.49
PTPRAP18433 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5.72□□□□□ -1.49
PTPRAP18433 RN7SL290P-201ENST00000578661 300 ntBASIC5.72□□□□□ -1.49
PTPRAP18433 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC5.72□□□□□ -1.49
PTPRAP18433 BNIP3P25-201ENST00000596023 559 ntBASIC5.72□□□□□ -1.49
PTPRAP18433 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC5.72□□□□□ -1.49
PTPRAP18433 AC113194.1-201ENST00000606037 500 ntBASIC5.72□□□□□ -1.49
PTPRAP18433 AC010424.2-201ENST00000607594 443 ntBASIC5.72□□□□□ -1.49
PTPRAP18433 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC5.72□□□□□ -1.49
PTPRAP18433 AL049794.2-201ENST00000616301 365 ntBASIC5.72□□□□□ -1.49
PTPRAP18433 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.72□□□□□ -1.49
PTPRAP18433 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC5.72□□□□□ -1.49
PTPRAP18433 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC5.72□□□□□ -1.49
PTPRAP18433 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
PTPRAP18433 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
PTPRAP18433 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC5.71□□□□□ -1.49
PTPRAP18433 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.49
PTPRAP18433 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
PTPRAP18433 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
PTPRAP18433 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
PTPRAP18433 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.49
PTPRAP18433 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
PTPRAP18433 API5-210ENST00000534600 1760 ntTSL 5 BASIC5.71□□□□□ -1.5
PTPRAP18433 MTCO1P7-201ENST00000419523 1542 ntBASIC5.71□□□□□ -1.5
PTPRAP18433 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC5.71□□□□□ -1.5
PTPRAP18433 U3.22-201ENST00000391120 215 ntBASIC5.71□□□□□ -1.5
PTPRAP18433 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
PTPRAP18433 RN7SKP247-201ENST00000411094 308 ntBASIC5.71□□□□□ -1.5
PTPRAP18433 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC5.71□□□□□ -1.5
PTPRAP18433 FTH1P1-201ENST00000437933 532 ntBASIC5.71□□□□□ -1.5
PTPRAP18433 AC016831.4-201ENST00000438302 307 ntBASIC5.71□□□□□ -1.5
PTPRAP18433 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC5.71□□□□□ -1.5
PTPRAP18433 AL731563.1-201ENST00000442202 214 ntBASIC5.71□□□□□ -1.5
PTPRAP18433 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC5.71□□□□□ -1.5
PTPRAP18433 AL161722.1-201ENST00000446972 1032 ntBASIC5.71□□□□□ -1.5
PTPRAP18433 AC000111.2-201ENST00000448200 210 ntBASIC5.71□□□□□ -1.5
PTPRAP18433 AL118520.1-201ENST00000450770 291 ntBASIC5.71□□□□□ -1.5
PTPRAP18433 AL691482.1-201ENST00000453255 87 ntBASIC5.71□□□□□ -1.5
PTPRAP18433 BTF3P15-201ENST00000455606 336 ntBASIC5.71□□□□□ -1.5
PTPRAP18433 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC5.71□□□□□ -1.5
PTPRAP18433 RNU7-182P-201ENST00000459009 62 ntBASIC5.71□□□□□ -1.5
PTPRAP18433 RNU7-180P-201ENST00000459240 63 ntBASIC5.71□□□□□ -1.5
PTPRAP18433 AC103987.1-201ENST00000473394 348 ntBASIC5.71□□□□□ -1.5
PTPRAP18433 PPP1R11P1-201ENST00000486095 376 ntBASIC5.71□□□□□ -1.5
PTPRAP18433 ALDH7A1P3-201ENST00000492517 345 ntBASIC5.71□□□□□ -1.5
PTPRAP18433 AC020893.1-201ENST00000502452 580 ntBASIC5.71□□□□□ -1.5
PTPRAP18433 AC018442.3-201ENST00000523025 183 ntBASIC5.71□□□□□ -1.5
PTPRAP18433 AP000889.2-201ENST00000532684 490 ntBASIC5.71□□□□□ -1.5
PTPRAP18433 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC5.71□□□□□ -1.5
PTPRAP18433 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC5.71□□□□□ -1.5
PTPRAP18433 ATP5J2P6-201ENST00000565203 266 ntBASIC5.71□□□□□ -1.5
PTPRAP18433 AC022884.2-201ENST00000578535 580 ntBASIC5.71□□□□□ -1.5
PTPRAP18433 MIR4775-201ENST00000581168 75 ntBASIC5.71□□□□□ -1.5
PTPRAP18433 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC5.71□□□□□ -1.5
PTPRAP18433 AC022726.1-201ENST00000587475 207 ntBASIC5.71□□□□□ -1.5
PTPRAP18433 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC5.71□□□□□ -1.5
PTPRAP18433 AL592436.1-201ENST00000605135 558 ntBASIC5.71□□□□□ -1.5
PTPRAP18433 AC022893.3-201ENST00000607665 437 ntBASIC5.71□□□□□ -1.5
PTPRAP18433 AL355816.1-201ENST00000607951 118 ntBASIC5.71□□□□□ -1.5
PTPRAP18433 AC092807.2-201ENST00000609367 243 ntBASIC5.71□□□□□ -1.5
PTPRAP18433 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC5.71□□□□□ -1.5
PTPRAP18433 AC103710.2-201ENST00000609912 942 ntBASIC5.71□□□□□ -1.5
PTPRAP18433 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC5.71□□□□□ -1.5
PTPRAP18433 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC5.71□□□□□ -1.5
PTPRAP18433 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
PTPRAP18433 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
PTPRAP18433 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
PTPRAP18433 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
PTPRAP18433 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.71□□□□□ -1.5
PTPRAP18433 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC5.71□□□□□ -1.5
PTPRAP18433 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.71□□□□□ -1.5
PTPRAP18433 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC5.71□□□□□ -1.5
PTPRAP18433 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.71□□□□□ -1.5
PTPRAP18433 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC5.71□□□□□ -1.5
PTPRAP18433 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.7□□□□□ -1.5
PTPRAP18433 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC5.7□□□□□ -1.5
PTPRAP18433 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
PTPRAP18433 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
PTPRAP18433 AP002512.4-202ENST00000641599 4530 ntBASIC5.7□□□□□ -1.5
PTPRAP18433 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
PTPRAP18433 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
PTPRAP18433 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
PTPRAP18433 AC139713.2-214ENST00000642059 1811 ntBASIC5.7□□□□□ -1.5
PTPRAP18433 AC140134.1-201ENST00000511830 3544 ntBASIC5.7□□□□□ -1.5
PTPRAP18433 AL139276.1-201ENST00000311910 1001 ntBASIC5.7□□□□□ -1.5
PTPRAP18433 HSPE1P11-201ENST00000339579 310 ntBASIC5.7□□□□□ -1.5
PTPRAP18433 Y_RNA.378-201ENST00000365652 113 ntBASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 125 ms