Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC3.56□□□□□ -1.84
CFTRP13569 AC010680.1-201ENST00000590024 3590 ntBASIC3.56□□□□□ -1.84
CFTRP13569 TMEM161BP1-201ENST00000457388 1457 ntBASIC3.56□□□□□ -1.84
CFTRP13569 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
CFTRP13569 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
CFTRP13569 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
CFTRP13569 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
CFTRP13569 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CFTRP13569 SDCBPP3-201ENST00000419629 891 ntBASIC3.55□□□□□ -1.84
CFTRP13569 PTP4A1P1-201ENST00000420539 515 ntBASIC3.55□□□□□ -1.84
CFTRP13569 ELOCP13-201ENST00000443934 329 ntBASIC3.55□□□□□ -1.84
CFTRP13569 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC3.55□□□□□ -1.84
CFTRP13569 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC3.55□□□□□ -1.84
CFTRP13569 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC3.55□□□□□ -1.84
CFTRP13569 RNU7-170P-201ENST00000459303 61 ntBASIC3.55□□□□□ -1.84
CFTRP13569 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC3.55□□□□□ -1.84
CFTRP13569 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.55□□□□□ -1.84
CFTRP13569 MIR4255-201ENST00000579351 72 ntBASIC3.55□□□□□ -1.84
CFTRP13569 AL160237.3-201ENST00000604114 1013 ntBASIC3.55□□□□□ -1.84
CFTRP13569 AC013562.2-201ENST00000611632 603 ntBASIC3.55□□□□□ -1.84
CFTRP13569 CYP3A51P-201ENST00000633513 256 ntBASIC3.55□□□□□ -1.84
CFTRP13569 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CFTRP13569 AP005901.5-201ENST00000545779 1796 ntBASIC3.55□□□□□ -1.84
CFTRP13569 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CFTRP13569 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CFTRP13569 ATP8A2P2-201ENST00000437678 1568 ntBASIC3.55□□□□□ -1.84
CFTRP13569 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CFTRP13569 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CFTRP13569 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC3.54□□□□□ -1.84
CFTRP13569 SNORA25.6-201ENST00000364121 118 ntBASIC3.54□□□□□ -1.84
CFTRP13569 RNU6ATAC38P-201ENST00000408119 126 ntBASIC3.54□□□□□ -1.84
CFTRP13569 AL358453.1-201ENST00000422522 250 ntBASIC3.54□□□□□ -1.84
CFTRP13569 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.54□□□□□ -1.84
CFTRP13569 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC3.54□□□□□ -1.84
CFTRP13569 AC087385.1-201ENST00000475062 312 ntBASIC3.54□□□□□ -1.84
CFTRP13569 AC092045.1-201ENST00000495716 1231 ntBASIC3.54□□□□□ -1.84
CFTRP13569 HMGB3P26-201ENST00000560051 582 ntBASIC3.54□□□□□ -1.84
CFTRP13569 AP002967.1-201ENST00000624203 539 ntBASIC3.54□□□□□ -1.84
CFTRP13569 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CFTRP13569 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
CFTRP13569 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
CFTRP13569 RNU6-457P-201ENST00000363999 107 ntBASIC3.54□□□□□ -1.84
CFTRP13569 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC3.54□□□□□ -1.84
CFTRP13569 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC3.54□□□□□ -1.84
CFTRP13569 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC3.54□□□□□ -1.84
CFTRP13569 AL357520.1-201ENST00000441557 453 ntBASIC3.54□□□□□ -1.84
CFTRP13569 AC009237.8-201ENST00000445492 379 ntBASIC3.54□□□□□ -1.84
CFTRP13569 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.54□□□□□ -1.84
CFTRP13569 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC3.54□□□□□ -1.84
CFTRP13569 OR4U1P-201ENST00000554958 912 ntBASIC3.54□□□□□ -1.84
CFTRP13569 AC120053.1-201ENST00000607706 736 ntBASIC3.54□□□□□ -1.84
CFTRP13569 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
CFTRP13569 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
CFTRP13569 RNU1-138P-201ENST00000384093 164 ntBASIC3.53□□□□□ -1.84
CFTRP13569 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.53□□□□□ -1.84
CFTRP13569 MTND5P23-201ENST00000430812 1655 ntBASIC3.53□□□□□ -1.84
CFTRP13569 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC3.53□□□□□ -1.84
CFTRP13569 FABP5P13-201ENST00000452144 328 ntBASIC3.53□□□□□ -1.84
CFTRP13569 RPL23AP44-201ENST00000482216 473 ntBASIC3.53□□□□□ -1.84
CFTRP13569 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC3.53□□□□□ -1.84
CFTRP13569 OR4K7P-201ENST00000580232 945 ntBASIC3.53□□□□□ -1.84
CFTRP13569 VN1R80P-201ENST00000597126 338 ntBASIC3.53□□□□□ -1.84
CFTRP13569 AC084035.1-201ENST00000634543 607 ntBASIC3.53□□□□□ -1.84
CFTRP13569 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CFTRP13569 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
CFTRP13569 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CFTRP13569 ZNF542P-204ENST00000482727 1305 ntBASIC3.52□□□□□ -1.85
CFTRP13569 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
CFTRP13569 AC012498.1-201ENST00000424037 437 ntBASIC3.52□□□□□ -1.85
CFTRP13569 AC239798.3-201ENST00000454459 408 ntBASIC3.52□□□□□ -1.85
CFTRP13569 AC233279.1-201ENST00000455300 423 ntBASIC3.52□□□□□ -1.85
CFTRP13569 SNORD13-201ENST00000459299 104 ntBASIC3.52□□□□□ -1.85
CFTRP13569 AC017007.3-201ENST00000479865 435 ntBASIC3.52□□□□□ -1.85
CFTRP13569 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
CFTRP13569 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC3.52□□□□□ -1.85
CFTRP13569 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC3.52□□□□□ -1.85
CFTRP13569 RPL23AP61-201ENST00000623642 466 ntBASIC3.52□□□□□ -1.85
CFTRP13569 MFSD8-245ENST00000641743 948 ntBASIC3.52□□□□□ -1.85
CFTRP13569 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CFTRP13569 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
CFTRP13569 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.52□□□□□ -1.85
CFTRP13569 AC093909.5-201ENST00000621839 1799 ntBASIC3.51□□□□□ -1.85
CFTRP13569 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CFTRP13569 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CFTRP13569 PNPT1P2-201ENST00000456768 2050 ntBASIC3.51□□□□□ -1.85
CFTRP13569 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC3.51□□□□□ -1.85
CFTRP13569 Y_RNA.508-201ENST00000384502 114 ntBASIC3.51□□□□□ -1.85
CFTRP13569 AC005005.2-201ENST00000420779 380 ntBASIC3.51□□□□□ -1.85
CFTRP13569 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC3.51□□□□□ -1.85
CFTRP13569 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC3.51□□□□□ -1.85
CFTRP13569 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC3.51□□□□□ -1.85
CFTRP13569 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC3.51□□□□□ -1.85
CFTRP13569 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC3.51□□□□□ -1.85
CFTRP13569 AC108479.2-201ENST00000617314 601 ntBASIC3.51□□□□□ -1.85
CFTRP13569 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.5□□□□□ -1.85
CFTRP13569 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.5□□□□□ -1.85
CFTRP13569 RNU6-661P-201ENST00000362409 107 ntBASIC3.5□□□□□ -1.85
CFTRP13569 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
CFTRP13569 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC3.5□□□□□ -1.85
CFTRP13569 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 123.4 ms