Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC5.52□□□□□ -1.53
THBS1P07996 AC073488.3-201ENST00000631611 778 ntBASIC5.52□□□□□ -1.53
THBS1P07996 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
THBS1P07996 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC5.52□□□□□ -1.53
THBS1P07996 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC5.52□□□□□ -1.53
THBS1P07996 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
THBS1P07996 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
THBS1P07996 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC5.52□□□□□ -1.53
THBS1P07996 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
THBS1P07996 AL161756.3-201ENST00000641216 2071 ntBASIC5.52□□□□□ -1.53
THBS1P07996 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
THBS1P07996 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
THBS1P07996 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC5.52□□□□□ -1.53
THBS1P07996 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
THBS1P07996 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
THBS1P07996 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
THBS1P07996 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
THBS1P07996 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.52□□□□□ -1.53
THBS1P07996 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
THBS1P07996 AL031119.1-201ENST00000404707 1879 ntBASIC5.51□□□□□ -1.53
THBS1P07996 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
THBS1P07996 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
THBS1P07996 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
THBS1P07996 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
THBS1P07996 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
THBS1P07996 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
THBS1P07996 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
THBS1P07996 RNU1-134P-201ENST00000362935 165 ntBASIC5.51□□□□□ -1.53
THBS1P07996 Y_RNA.237-201ENST00000364439 102 ntBASIC5.51□□□□□ -1.53
THBS1P07996 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
THBS1P07996 RNU6-637P-201ENST00000384050 107 ntBASIC5.51□□□□□ -1.53
THBS1P07996 RNA5SP122-201ENST00000384457 108 ntBASIC5.51□□□□□ -1.53
THBS1P07996 MIR613-201ENST00000385248 95 ntBASIC5.51□□□□□ -1.53
THBS1P07996 GCNT1P4-201ENST00000404096 329 ntBASIC5.51□□□□□ -1.53
THBS1P07996 RNU6-1140P-201ENST00000410517 106 ntBASIC5.51□□□□□ -1.53
THBS1P07996 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC5.51□□□□□ -1.53
THBS1P07996 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC5.51□□□□□ -1.53
THBS1P07996 RPL21P38-201ENST00000418090 167 ntBASIC5.51□□□□□ -1.53
THBS1P07996 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC5.51□□□□□ -1.53
THBS1P07996 PNKDP1-201ENST00000435914 430 ntBASIC5.51□□□□□ -1.53
THBS1P07996 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC5.51□□□□□ -1.53
THBS1P07996 RNU7-169P-201ENST00000459456 61 ntBASIC5.51□□□□□ -1.53
THBS1P07996 RPL37P6-201ENST00000460682 294 ntBASIC5.51□□□□□ -1.53
THBS1P07996 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC5.51□□□□□ -1.53
THBS1P07996 HMGB1P21-201ENST00000502313 581 ntBASIC5.51□□□□□ -1.53
THBS1P07996 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.51□□□□□ -1.53
THBS1P07996 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC5.51□□□□□ -1.53
THBS1P07996 Y_RNA.687-201ENST00000516558 91 ntBASIC5.51□□□□□ -1.53
THBS1P07996 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC5.51□□□□□ -1.53
THBS1P07996 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC5.51□□□□□ -1.53
THBS1P07996 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC5.51□□□□□ -1.53
THBS1P07996 AC009852.2-201ENST00000567898 485 ntBASIC5.51□□□□□ -1.53
THBS1P07996 RN7SL802P-201ENST00000577858 299 ntBASIC5.51□□□□□ -1.53
THBS1P07996 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC5.51□□□□□ -1.53
THBS1P07996 AC010900.2-201ENST00000604508 210 ntBASIC5.51□□□□□ -1.53
THBS1P07996 ELOCP5-201ENST00000604924 333 ntBASIC5.51□□□□□ -1.53
THBS1P07996 SDR42E1P1-201ENST00000611327 477 ntBASIC5.51□□□□□ -1.53
THBS1P07996 uc_338.26-201ENST00000612659 160 ntBASIC5.51□□□□□ -1.53
THBS1P07996 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC5.51□□□□□ -1.53
THBS1P07996 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC5.51□□□□□ -1.53
THBS1P07996 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
THBS1P07996 RBMY1HP-201ENST00000382759 1389 ntBASIC5.51□□□□□ -1.53
THBS1P07996 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
THBS1P07996 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
THBS1P07996 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
THBS1P07996 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC5.51□□□□□ -1.53
THBS1P07996 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
THBS1P07996 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC5.51□□□□□ -1.53
THBS1P07996 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
THBS1P07996 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
THBS1P07996 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
THBS1P07996 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
THBS1P07996 AC015799.1-201ENST00000622996 3122 ntBASIC5.5□□□□□ -1.53
THBS1P07996 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
THBS1P07996 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC5.5□□□□□ -1.53
THBS1P07996 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
THBS1P07996 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
THBS1P07996 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC5.5□□□□□ -1.53
THBS1P07996 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
THBS1P07996 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
THBS1P07996 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC5.5□□□□□ -1.53
THBS1P07996 RNA5SP110-201ENST00000362638 115 ntBASIC5.5□□□□□ -1.53
THBS1P07996 RNU6-1243P-201ENST00000364028 107 ntBASIC5.5□□□□□ -1.53
THBS1P07996 RNU11-201ENST00000387069 134 ntBASIC5.5□□□□□ -1.53
THBS1P07996 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
THBS1P07996 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
THBS1P07996 RNU2-22P-201ENST00000411266 212 ntBASIC5.5□□□□□ -1.53
THBS1P07996 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC5.5□□□□□ -1.53
THBS1P07996 AL031736.2-201ENST00000426573 787 ntBASIC5.5□□□□□ -1.53
THBS1P07996 AL590399.2-201ENST00000427536 309 ntBASIC5.5□□□□□ -1.53
THBS1P07996 SETP5-201ENST00000437270 562 ntBASIC5.5□□□□□ -1.53
THBS1P07996 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.5□□□□□ -1.53
THBS1P07996 AP000942.1-201ENST00000463969 747 ntBASIC5.5□□□□□ -1.53
THBS1P07996 CBX1-205ENST00000495350 550 ntTSL 2 BASIC5.5□□□□□ -1.53
THBS1P07996 Y_RNA.713-201ENST00000517013 96 ntBASIC5.5□□□□□ -1.53
THBS1P07996 IGKV2-23-201ENST00000518729 323 ntBASIC5.5□□□□□ -1.53
THBS1P07996 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC5.5□□□□□ -1.53
THBS1P07996 AC091144.1-201ENST00000519573 138 ntBASIC5.5□□□□□ -1.53
THBS1P07996 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
THBS1P07996 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 86.7 ms