Protein–RNA interactions for Protein: O75127

PTCD1, Pentatricopeptide repeat-containing protein 1, mitochondrial, humanhuman

Known RBP Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1O75127 Y_RNA.615-201ENST00000410769 117 ntBASIC6.21□□□□□ -1.42
PTCD1O75127 ELOCP19-201ENST00000411919 318 ntBASIC6.21□□□□□ -1.42
PTCD1O75127 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC6.21□□□□□ -1.42
PTCD1O75127 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
PTCD1O75127 AC105402.2-201ENST00000438503 358 ntBASIC6.21□□□□□ -1.42
PTCD1O75127 MTND2P29-201ENST00000438595 412 ntBASIC6.21□□□□□ -1.42
PTCD1O75127 HMGB1P18-201ENST00000438801 619 ntBASIC6.21□□□□□ -1.42
PTCD1O75127 SUMO1P3-201ENST00000439961 304 ntBASIC6.21□□□□□ -1.42
PTCD1O75127 EEF1A1P1-201ENST00000447052 739 ntBASIC6.21□□□□□ -1.42
PTCD1O75127 AC073415.1-201ENST00000449240 153 ntBASIC6.21□□□□□ -1.42
PTCD1O75127 MTND3P16-201ENST00000452205 344 ntBASIC6.21□□□□□ -1.42
PTCD1O75127 PPP1R2P5-201ENST00000457256 603 ntBASIC6.21□□□□□ -1.42
PTCD1O75127 AC007547.1-201ENST00000462177 490 ntBASIC6.21□□□□□ -1.42
PTCD1O75127 HMGN2P26-201ENST00000463169 339 ntBASIC6.21□□□□□ -1.42
PTCD1O75127 TAF8-207ENST00000482432 556 ntTSL 2 BASIC6.21□□□□□ -1.42
PTCD1O75127 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC6.21□□□□□ -1.42
PTCD1O75127 COX6CP5-201ENST00000527162 228 ntBASIC6.21□□□□□ -1.42
PTCD1O75127 OR5BN1P-201ENST00000532955 829 ntBASIC6.21□□□□□ -1.42
PTCD1O75127 TOMM20P2-201ENST00000540082 421 ntBASIC6.21□□□□□ -1.42
PTCD1O75127 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC6.21□□□□□ -1.42
PTCD1O75127 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC6.21□□□□□ -1.42
PTCD1O75127 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC6.21□□□□□ -1.42
PTCD1O75127 AC105224.1-201ENST00000587055 421 ntBASIC6.21□□□□□ -1.42
PTCD1O75127 AL109918.3-201ENST00000603072 338 ntBASIC6.21□□□□□ -1.42
PTCD1O75127 AL356218.2-201ENST00000605264 187 ntBASIC6.21□□□□□ -1.42
PTCD1O75127 AL121932.1-201ENST00000605542 214 ntBASIC6.21□□□□□ -1.42
PTCD1O75127 AC130324.3-201ENST00000614165 542 ntBASIC6.21□□□□□ -1.42
PTCD1O75127 AC090971.5-201ENST00000621102 293 ntBASIC6.21□□□□□ -1.42
PTCD1O75127 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
PTCD1O75127 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
PTCD1O75127 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
PTCD1O75127 AL442639.1-201ENST00000625030 1899 ntBASIC6.21□□□□□ -1.42
PTCD1O75127 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
PTCD1O75127 AC009902.3-201ENST00000606235 2172 ntBASIC6.21□□□□□ -1.42
PTCD1O75127 AC004656.1-201ENST00000568479 4951 ntBASIC6.21□□□□□ -1.42
PTCD1O75127 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
PTCD1O75127 AC108751.5-201ENST00000492880 1336 ntBASIC6.21□□□□□ -1.42
PTCD1O75127 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
PTCD1O75127 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
PTCD1O75127 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC6.21□□□□□ -1.42
PTCD1O75127 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
PTCD1O75127 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
PTCD1O75127 AC004817.4-201ENST00000602396 3625 ntBASIC6.2□□□□□ -1.42
PTCD1O75127 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC6.2□□□□□ -1.42
PTCD1O75127 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC6.2□□□□□ -1.42
PTCD1O75127 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
PTCD1O75127 Y_RNA.128-201ENST00000363391 112 ntBASIC6.2□□□□□ -1.42
PTCD1O75127 SNORD42.2-201ENST00000365570 69 ntBASIC6.2□□□□□ -1.42
PTCD1O75127 AL603908.1-201ENST00000406098 201 ntBASIC6.2□□□□□ -1.42
PTCD1O75127 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC6.2□□□□□ -1.42
PTCD1O75127 MRPS21P2-201ENST00000424704 264 ntBASIC6.2□□□□□ -1.42
PTCD1O75127 FTH1P1-201ENST00000437933 532 ntBASIC6.2□□□□□ -1.42
PTCD1O75127 Z98949.2-201ENST00000440996 144 ntBASIC6.2□□□□□ -1.42
PTCD1O75127 RPL10P17-201ENST00000453852 316 ntBASIC6.2□□□□□ -1.42
PTCD1O75127 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC6.2□□□□□ -1.42
PTCD1O75127 RPS4XP10-201ENST00000465034 731 ntBASIC6.2□□□□□ -1.42
PTCD1O75127 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
PTCD1O75127 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC6.2□□□□□ -1.42
PTCD1O75127 AC016559.2-201ENST00000510759 359 ntBASIC6.2□□□□□ -1.42
PTCD1O75127 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC6.2□□□□□ -1.42
PTCD1O75127 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC6.2□□□□□ -1.42
PTCD1O75127 RN7SKP122-201ENST00000515923 296 ntBASIC6.2□□□□□ -1.42
PTCD1O75127 RNU4-29P-201ENST00000515943 174 ntBASIC6.2□□□□□ -1.42
PTCD1O75127 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC6.2□□□□□ -1.42
PTCD1O75127 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC6.2□□□□□ -1.42
PTCD1O75127 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC6.2□□□□□ -1.42
PTCD1O75127 MIR5699-201ENST00000578903 90 ntBASIC6.2□□□□□ -1.42
PTCD1O75127 AC113139.1-201ENST00000605049 239 ntBASIC6.2□□□□□ -1.42
PTCD1O75127 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC6.2□□□□□ -1.42
PTCD1O75127 AC019193.3-201ENST00000609144 554 ntBASIC6.2□□□□□ -1.42
PTCD1O75127 AL133215.3-201ENST00000609801 448 ntBASIC6.2□□□□□ -1.42
PTCD1O75127 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC6.2□□□□□ -1.42
PTCD1O75127 Z95114.1-201ENST00000624264 14574 ntBASIC6.2□□□□□ -1.42
PTCD1O75127 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC6.2□□□□□ -1.42
PTCD1O75127 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC6.2□□□□□ -1.42
PTCD1O75127 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
PTCD1O75127 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC6.2□□□□□ -1.42
PTCD1O75127 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC6.2□□□□□ -1.42
PTCD1O75127 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
PTCD1O75127 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
PTCD1O75127 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
PTCD1O75127 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC6.19□□□□□ -1.42
PTCD1O75127 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC6.19□□□□□ -1.42
PTCD1O75127 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC6.19□□□□□ -1.42
PTCD1O75127 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
PTCD1O75127 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
PTCD1O75127 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC6.19□□□□□ -1.42
PTCD1O75127 Y_RNA.231-201ENST00000364358 102 ntBASIC6.19□□□□□ -1.42
PTCD1O75127 Y_RNA.422-201ENST00000384054 114 ntBASIC6.19□□□□□ -1.42
PTCD1O75127 Y_RNA.474-201ENST00000384341 102 ntBASIC6.19□□□□□ -1.42
PTCD1O75127 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
PTCD1O75127 RNU1-82P-201ENST00000390851 165 ntBASIC6.19□□□□□ -1.42
PTCD1O75127 RNU4-25P-201ENST00000410569 230 ntBASIC6.19□□□□□ -1.42
PTCD1O75127 RNU2-62P-201ENST00000410868 191 ntBASIC6.19□□□□□ -1.42
PTCD1O75127 AC104308.1-201ENST00000454621 333 ntBASIC6.19□□□□□ -1.42
PTCD1O75127 GMFBP1-201ENST00000467831 427 ntBASIC6.19□□□□□ -1.42
PTCD1O75127 AC020893.1-201ENST00000502452 580 ntBASIC6.19□□□□□ -1.42
PTCD1O75127 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
PTCD1O75127 Y_RNA.711-201ENST00000516993 102 ntBASIC6.19□□□□□ -1.42
PTCD1O75127 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC6.19□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms