Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC5.95□□□□□ -1.46
GFRA3O60609 AC110491.1-201ENST00000562191 2010 ntBASIC5.95□□□□□ -1.46
GFRA3O60609 MIR4659A-201ENST00000580269 81 ntBASIC5.95□□□□□ -1.46
GFRA3O60609 RN7SL52P-201ENST00000584271 284 ntBASIC5.95□□□□□ -1.46
GFRA3O60609 AC007566.2-201ENST00000603642 413 ntBASIC5.95□□□□□ -1.46
GFRA3O60609 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC5.95□□□□□ -1.46
GFRA3O60609 AC011603.4-201ENST00000611325 277 ntBASIC5.95□□□□□ -1.46
GFRA3O60609 AC011476.5-201ENST00000615594 130 ntBASIC5.95□□□□□ -1.46
GFRA3O60609 RN7SL722P-201ENST00000617780 284 ntBASIC5.95□□□□□ -1.46
GFRA3O60609 RN7SL565P-201ENST00000618246 284 ntBASIC5.95□□□□□ -1.46
GFRA3O60609 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC5.95□□□□□ -1.46
GFRA3O60609 MIR548A1HG-202ENST00000637804 784 ntTSL 5 BASIC5.95□□□□□ -1.46
GFRA3O60609 CX3CR1-202ENST00000399220 3106 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
GFRA3O60609 CXCR6-204ENST00000458629 2805 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
GFRA3O60609 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
GFRA3O60609 AL023495.1-201ENST00000413005 1923 ntTSL 2 BASIC5.95□□□□□ -1.46
GFRA3O60609 HSPA8P4-201ENST00000511877 1920 ntBASIC5.95□□□□□ -1.46
GFRA3O60609 VCAN-202ENST00000342785 7154 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
GFRA3O60609 AL390036.1-202ENST00000634635 2439 ntTSL 5 BASIC5.95□□□□□ -1.46
GFRA3O60609 JAM3-202ENST00000441717 3363 ntTSL 2 BASIC5.95□□□□□ -1.46
GFRA3O60609 DEFB132-201ENST00000382376 2121 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
GFRA3O60609 TBX15-201ENST00000207157 3492 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
GFRA3O60609 CDKL5-201ENST00000379989 3463 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
GFRA3O60609 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
GFRA3O60609 FOCAD-216ENST00000605086 4195 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
GFRA3O60609 RASGEF1B-214ENST00000638048 2386 ntTSL 5 BASIC5.94□□□□□ -1.46
GFRA3O60609 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC5.94□□□□□ -1.46
GFRA3O60609 LARS-212ENST00000510191 3737 ntTSL 2 BASIC5.94□□□□□ -1.46
GFRA3O60609 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
GFRA3O60609 AL109941.1-201ENST00000401925 229 ntBASIC5.94□□□□□ -1.46
GFRA3O60609 AC016739.1-201ENST00000405359 345 ntBASIC5.94□□□□□ -1.46
GFRA3O60609 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC5.94□□□□□ -1.46
GFRA3O60609 AC004870.2-202ENST00000423781 706 ntTSL 3 BASIC5.94□□□□□ -1.46
GFRA3O60609 AC024067.1-201ENST00000426199 223 ntBASIC5.94□□□□□ -1.46
GFRA3O60609 HMGB3P24-201ENST00000433260 622 ntBASIC5.94□□□□□ -1.46
GFRA3O60609 IGKV1OR10-1-201ENST00000442306 329 ntBASIC5.94□□□□□ -1.46
GFRA3O60609 AL136981.1-203ENST00000451452 3844 ntBASIC5.94□□□□□ -1.46
GFRA3O60609 RPS29P33-201ENST00000456717 146 ntBASIC5.94□□□□□ -1.46
GFRA3O60609 snoU13.8-201ENST00000458890 104 ntBASIC5.94□□□□□ -1.46
GFRA3O60609 HMGB3P3-201ENST00000510526 400 ntBASIC5.94□□□□□ -1.46
GFRA3O60609 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC5.94□□□□□ -1.46
GFRA3O60609 RNU6-537P-201ENST00000517277 103 ntBASIC5.94□□□□□ -1.46
GFRA3O60609 COX6B1P6-201ENST00000522347 255 ntBASIC5.94□□□□□ -1.46
GFRA3O60609 AC100784.1-201ENST00000522790 310 ntBASIC5.94□□□□□ -1.46
GFRA3O60609 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC5.94□□□□□ -1.46
GFRA3O60609 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC5.94□□□□□ -1.46
GFRA3O60609 AL020997.2-201ENST00000602607 184 ntBASIC5.94□□□□□ -1.46
GFRA3O60609 FAM25E-202ENST00000608562 189 ntBASIC5.94□□□□□ -1.46
GFRA3O60609 AC091953.3-201ENST00000623220 236 ntBASIC5.94□□□□□ -1.46
GFRA3O60609 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC5.94□□□□□ -1.46
GFRA3O60609 AC093278.2-201ENST00000564956 2485 ntBASIC5.94□□□□□ -1.46
GFRA3O60609 LINC00282-202ENST00000627246 4008 ntAPPRIS P5 TSL 2 BASIC5.94□□□□□ -1.46
GFRA3O60609 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
GFRA3O60609 AC025809.2-201ENST00000625085 1802 ntBASIC5.94□□□□□ -1.46
GFRA3O60609 AC092821.2-201ENST00000545710 2042 ntBASIC5.94□□□□□ -1.46
GFRA3O60609 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
GFRA3O60609 SPATA31C1-201ENST00000420021 3895 ntBASIC5.94□□□□□ -1.46
GFRA3O60609 RGPD3-201ENST00000304514 5510 ntAPPRIS ALT2 TSL 2 BASIC5.94□□□□□ -1.46
GFRA3O60609 STIL-201ENST00000337817 5087 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
GFRA3O60609 AMOT-203ENST00000371959 7319 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
GFRA3O60609 SH3D19-210ENST00000514152 5107 ntAPPRIS ALT1 TSL 2 BASIC5.93□□□□□ -1.46
GFRA3O60609 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
GFRA3O60609 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC5.93□□□□□ -1.46
GFRA3O60609 NEDD9-216ENST00000620854 4086 ntTSL 5 BASIC5.93□□□□□ -1.46
GFRA3O60609 TRIM5-203ENST00000396847 3170 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
GFRA3O60609 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
GFRA3O60609 Y_RNA.7-201ENST00000362352 102 ntBASIC5.93□□□□□ -1.46
GFRA3O60609 RNA5SP305-201ENST00000362665 119 ntBASIC5.93□□□□□ -1.46
GFRA3O60609 SNORA62-201ENST00000365493 153 ntBASIC5.93□□□□□ -1.46
GFRA3O60609 HMGN3P1-201ENST00000453847 193 ntBASIC5.93□□□□□ -1.46
GFRA3O60609 SNORD97-201ENST00000459187 142 ntBASIC5.93□□□□□ -1.46
GFRA3O60609 RPL23AP40-201ENST00000487630 390 ntBASIC5.93□□□□□ -1.46
GFRA3O60609 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC5.93□□□□□ -1.46
GFRA3O60609 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC5.93□□□□□ -1.46
GFRA3O60609 TOMM20P2-201ENST00000540082 421 ntBASIC5.93□□□□□ -1.46
GFRA3O60609 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC5.93□□□□□ -1.46
GFRA3O60609 AC017100.2-201ENST00000584628 355 ntBASIC5.93□□□□□ -1.46
GFRA3O60609 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC5.93□□□□□ -1.46
GFRA3O60609 LINC01441-201ENST00000433766 2290 ntTSL 2 BASIC5.93□□□□□ -1.46
GFRA3O60609 ZNF585A-201ENST00000292841 8618 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
GFRA3O60609 PROX1-203ENST00000435016 3075 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
GFRA3O60609 MAPK10-251ENST00000640858 3052 ntTSL 5 BASIC5.93□□□□□ -1.46
GFRA3O60609 GPRIN3-202ENST00000609438 14244 ntAPPRIS P1 TSL 2 BASIC5.93□□□□□ -1.46
GFRA3O60609 SLC39A12-202ENST00000377371 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC5.93□□□□□ -1.46
GFRA3O60609 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
GFRA3O60609 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
GFRA3O60609 TLR7-201ENST00000380659 5011 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
GFRA3O60609 TMC1-201ENST00000297784 3201 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
GFRA3O60609 PPP2R3A-201ENST00000264977 6795 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
GFRA3O60609 AC007938.2-201ENST00000604666 2634 ntBASIC5.93□□□□□ -1.46
GFRA3O60609 AP004289.1-201ENST00000436307 2205 ntBASIC5.93□□□□□ -1.46
GFRA3O60609 ARHGAP32-201ENST00000310343 10111 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
GFRA3O60609 NEXMIF-203ENST00000616200 10624 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
GFRA3O60609 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC5.92□□□□□ -1.46
GFRA3O60609 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC5.92□□□□□ -1.46
GFRA3O60609 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC5.92□□□□□ -1.46
GFRA3O60609 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5.92□□□□□ -1.46
GFRA3O60609 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
GFRA3O60609 GAPVD1-215ENST00000470056 8923 ntTSL 5 BASIC5.92□□□□□ -1.46
GFRA3O60609 ZNF826P-207ENST00000622273 1910 ntBASIC5.92□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 90 ms