Protein–RNA interactions for Protein: A0A0J9YWV2

TRBV4-1, T-cell receptor beta variable 4-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV4-1A0A0J9YWV2 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
TRBV4-1A0A0J9YWV2 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.33□□□□□ -1.88
TRBV4-1A0A0J9YWV2 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
TRBV4-1A0A0J9YWV2 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.32□□□□□ -1.88
TRBV4-1A0A0J9YWV2 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
TRBV4-1A0A0J9YWV2 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
TRBV4-1A0A0J9YWV2 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.32□□□□□ -1.88
TRBV4-1A0A0J9YWV2 MIR372-201ENST00000362225 67 ntBASIC3.32□□□□□ -1.88
TRBV4-1A0A0J9YWV2 RNU6-777P-201ENST00000364265 104 ntBASIC3.32□□□□□ -1.88
TRBV4-1A0A0J9YWV2 SNORD6-201ENST00000365444 73 ntBASIC3.32□□□□□ -1.88
TRBV4-1A0A0J9YWV2 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.32□□□□□ -1.88
TRBV4-1A0A0J9YWV2 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
TRBV4-1A0A0J9YWV2 RPL7P60-201ENST00000397636 735 ntBASIC3.32□□□□□ -1.88
TRBV4-1A0A0J9YWV2 RNU4-78P-201ENST00000410940 126 ntBASIC3.32□□□□□ -1.88
TRBV4-1A0A0J9YWV2 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC3.32□□□□□ -1.88
TRBV4-1A0A0J9YWV2 COX6CP17-201ENST00000421389 185 ntBASIC3.32□□□□□ -1.88
TRBV4-1A0A0J9YWV2 TEX41-204ENST00000423031 491 ntTSL 4 BASIC3.32□□□□□ -1.88
TRBV4-1A0A0J9YWV2 AL117339.2-201ENST00000430475 180 ntBASIC3.32□□□□□ -1.88
TRBV4-1A0A0J9YWV2 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC3.32□□□□□ -1.88
TRBV4-1A0A0J9YWV2 AL117351.1-201ENST00000438864 766 ntBASIC3.32□□□□□ -1.88
TRBV4-1A0A0J9YWV2 BTF3P5-201ENST00000457252 467 ntBASIC3.32□□□□□ -1.88
TRBV4-1A0A0J9YWV2 AP000873.1-201ENST00000463987 400 ntBASIC3.32□□□□□ -1.88
TRBV4-1A0A0J9YWV2 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.32□□□□□ -1.88
TRBV4-1A0A0J9YWV2 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC3.32□□□□□ -1.88
TRBV4-1A0A0J9YWV2 AC078817.1-201ENST00000492623 435 ntBASIC3.32□□□□□ -1.88
TRBV4-1A0A0J9YWV2 RPL5P23-201ENST00000496040 868 ntBASIC3.32□□□□□ -1.88
TRBV4-1A0A0J9YWV2 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC3.32□□□□□ -1.88
TRBV4-1A0A0J9YWV2 AC111000.2-201ENST00000507775 550 ntBASIC3.32□□□□□ -1.88
TRBV4-1A0A0J9YWV2 AC093809.1-201ENST00000509155 340 ntBASIC3.32□□□□□ -1.88
TRBV4-1A0A0J9YWV2 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC3.32□□□□□ -1.88
TRBV4-1A0A0J9YWV2 CDH12P4-201ENST00000517835 295 ntBASIC3.32□□□□□ -1.88
TRBV4-1A0A0J9YWV2 CDH12P3-201ENST00000517935 295 ntBASIC3.32□□□□□ -1.88
TRBV4-1A0A0J9YWV2 CDH12P1-201ENST00000518435 295 ntBASIC3.32□□□□□ -1.88
TRBV4-1A0A0J9YWV2 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.32□□□□□ -1.88
TRBV4-1A0A0J9YWV2 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
TRBV4-1A0A0J9YWV2 AC109446.2-201ENST00000567872 497 ntBASIC3.32□□□□□ -1.88
TRBV4-1A0A0J9YWV2 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.32□□□□□ -1.88
TRBV4-1A0A0J9YWV2 AC087499.8-201ENST00000578406 226 ntBASIC3.32□□□□□ -1.88
TRBV4-1A0A0J9YWV2 AC008088.1-201ENST00000580993 280 ntBASIC3.32□□□□□ -1.88
TRBV4-1A0A0J9YWV2 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC3.32□□□□□ -1.88
TRBV4-1A0A0J9YWV2 AC122133.1-201ENST00000613964 233 ntBASIC3.32□□□□□ -1.88
TRBV4-1A0A0J9YWV2 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC3.32□□□□□ -1.88
TRBV4-1A0A0J9YWV2 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC3.32□□□□□ -1.88
TRBV4-1A0A0J9YWV2 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
TRBV4-1A0A0J9YWV2 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
TRBV4-1A0A0J9YWV2 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
TRBV4-1A0A0J9YWV2 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.32□□□□□ -1.88
TRBV4-1A0A0J9YWV2 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.32□□□□□ -1.88
TRBV4-1A0A0J9YWV2 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
TRBV4-1A0A0J9YWV2 AC068647.1-201ENST00000489539 2265 ntBASIC3.31□□□□□ -1.88
TRBV4-1A0A0J9YWV2 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC3.31□□□□□ -1.88
TRBV4-1A0A0J9YWV2 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
TRBV4-1A0A0J9YWV2 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
TRBV4-1A0A0J9YWV2 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
TRBV4-1A0A0J9YWV2 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
TRBV4-1A0A0J9YWV2 RNA5SP258-201ENST00000362750 119 ntBASIC3.31□□□□□ -1.88
TRBV4-1A0A0J9YWV2 RNA5SP167-201ENST00000365461 116 ntBASIC3.31□□□□□ -1.88
TRBV4-1A0A0J9YWV2 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
TRBV4-1A0A0J9YWV2 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC3.31□□□□□ -1.88
TRBV4-1A0A0J9YWV2 RNU1-13P-201ENST00000384499 162 ntBASIC3.31□□□□□ -1.88
TRBV4-1A0A0J9YWV2 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
TRBV4-1A0A0J9YWV2 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.31□□□□□ -1.88
TRBV4-1A0A0J9YWV2 AIMP1P1-201ENST00000418670 937 ntBASIC3.31□□□□□ -1.88
TRBV4-1A0A0J9YWV2 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC3.31□□□□□ -1.88
TRBV4-1A0A0J9YWV2 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
TRBV4-1A0A0J9YWV2 AL139247.1-201ENST00000422768 325 ntBASIC3.31□□□□□ -1.88
TRBV4-1A0A0J9YWV2 OR8F1P-201ENST00000425243 930 ntBASIC3.31□□□□□ -1.88
TRBV4-1A0A0J9YWV2 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC3.31□□□□□ -1.88
TRBV4-1A0A0J9YWV2 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC3.31□□□□□ -1.88
TRBV4-1A0A0J9YWV2 AL590103.1-201ENST00000434488 307 ntBASIC3.31□□□□□ -1.88
TRBV4-1A0A0J9YWV2 MTCYBP45-201ENST00000435243 565 ntBASIC3.31□□□□□ -1.88
TRBV4-1A0A0J9YWV2 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.31□□□□□ -1.88
TRBV4-1A0A0J9YWV2 AC002381.1-201ENST00000447049 280 ntBASIC3.31□□□□□ -1.88
TRBV4-1A0A0J9YWV2 AC097262.1-201ENST00000452559 548 ntBASIC3.31□□□□□ -1.88
TRBV4-1A0A0J9YWV2 SBDSP1-204ENST00000453858 737 ntBASIC3.31□□□□□ -1.88
TRBV4-1A0A0J9YWV2 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC3.31□□□□□ -1.88
TRBV4-1A0A0J9YWV2 RPL9P32-201ENST00000464118 620 ntBASIC3.31□□□□□ -1.88
TRBV4-1A0A0J9YWV2 ACTR3BP4-201ENST00000503033 1244 ntBASIC3.31□□□□□ -1.88
TRBV4-1A0A0J9YWV2 RPF2P2-201ENST00000504693 896 ntBASIC3.31□□□□□ -1.88
TRBV4-1A0A0J9YWV2 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC3.31□□□□□ -1.88
TRBV4-1A0A0J9YWV2 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC3.31□□□□□ -1.88
TRBV4-1A0A0J9YWV2 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC3.31□□□□□ -1.88
TRBV4-1A0A0J9YWV2 AC024589.1-201ENST00000512207 263 ntBASIC3.31□□□□□ -1.88
TRBV4-1A0A0J9YWV2 AC093677.1-201ENST00000514414 678 ntBASIC3.31□□□□□ -1.88
TRBV4-1A0A0J9YWV2 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.31□□□□□ -1.88
TRBV4-1A0A0J9YWV2 RNU6-759P-201ENST00000516740 103 ntBASIC3.31□□□□□ -1.88
TRBV4-1A0A0J9YWV2 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC3.31□□□□□ -1.88
TRBV4-1A0A0J9YWV2 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.31□□□□□ -1.88
TRBV4-1A0A0J9YWV2 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
TRBV4-1A0A0J9YWV2 AC024224.1-201ENST00000538284 609 ntBASIC3.31□□□□□ -1.88
TRBV4-1A0A0J9YWV2 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.31□□□□□ -1.88
TRBV4-1A0A0J9YWV2 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC3.31□□□□□ -1.88
TRBV4-1A0A0J9YWV2 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.31□□□□□ -1.88
TRBV4-1A0A0J9YWV2 OR6C7P-201ENST00000547875 934 ntBASIC3.31□□□□□ -1.88
TRBV4-1A0A0J9YWV2 AC007954.1-201ENST00000554198 494 ntBASIC3.31□□□□□ -1.88
TRBV4-1A0A0J9YWV2 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC3.31□□□□□ -1.88
TRBV4-1A0A0J9YWV2 ANKRD36BP2-206ENST00000575193 1245 ntBASIC3.31□□□□□ -1.88
TRBV4-1A0A0J9YWV2 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC3.31□□□□□ -1.88
TRBV4-1A0A0J9YWV2 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.31□□□□□ -1.88
TRBV4-1A0A0J9YWV2 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 116.9 ms