Protein–RNA interactions for Protein: Q9Y3E1

HDGFL3, Hepatoma-derived growth factor-related protein 3, humanhuman

Predictions only

Length 203 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3Q9Y3E1 AC083865.1-201ENST00000636634 831 ntBASIC2.54□□□□□ -2
HDGFL3Q9Y3E1 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
HDGFL3Q9Y3E1 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC2.54□□□□□ -2
HDGFL3Q9Y3E1 AC092593.1-201ENST00000515413 1815 ntBASIC2.54□□□□□ -2
HDGFL3Q9Y3E1 GABRG2-229ENST00000641017 3628 ntBASIC2.54□□□□□ -2
HDGFL3Q9Y3E1 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
HDGFL3Q9Y3E1 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.53□□□□□ -2
HDGFL3Q9Y3E1 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
HDGFL3Q9Y3E1 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC2.53□□□□□ -2
HDGFL3Q9Y3E1 ASNSP3-201ENST00000451989 1306 ntBASIC2.53□□□□□ -2
HDGFL3Q9Y3E1 GNG5P1-201ENST00000255500 204 ntBASIC2.53□□□□□ -2
HDGFL3Q9Y3E1 Y_RNA.493-201ENST00000384422 102 ntBASIC2.53□□□□□ -2
HDGFL3Q9Y3E1 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC2.53□□□□□ -2
HDGFL3Q9Y3E1 AL590004.2-201ENST00000404787 371 ntBASIC2.53□□□□□ -2
HDGFL3Q9Y3E1 SNORD88.1-201ENST00000408684 91 ntBASIC2.53□□□□□ -2
HDGFL3Q9Y3E1 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC2.53□□□□□ -2
HDGFL3Q9Y3E1 DUTP6-201ENST00000425573 462 ntBASIC2.53□□□□□ -2
HDGFL3Q9Y3E1 AC073508.1-201ENST00000428866 656 ntBASIC2.53□□□□□ -2
HDGFL3Q9Y3E1 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC2.53□□□□□ -2
HDGFL3Q9Y3E1 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC2.53□□□□□ -2
HDGFL3Q9Y3E1 UBE2V2P3-201ENST00000433562 437 ntBASIC2.53□□□□□ -2
HDGFL3Q9Y3E1 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC2.53□□□□□ -2
HDGFL3Q9Y3E1 FABP5P3-201ENST00000437960 408 ntBASIC2.53□□□□□ -2
HDGFL3Q9Y3E1 UBE2V1P5-201ENST00000440070 405 ntBASIC2.53□□□□□ -2
HDGFL3Q9Y3E1 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.53□□□□□ -2
HDGFL3Q9Y3E1 RABEPKP1-201ENST00000440529 1026 ntBASIC2.53□□□□□ -2
HDGFL3Q9Y3E1 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC2.53□□□□□ -2
HDGFL3Q9Y3E1 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC2.53□□□□□ -2
HDGFL3Q9Y3E1 AC015724.1-201ENST00000478577 156 ntBASIC2.53□□□□□ -2
HDGFL3Q9Y3E1 SSR3-208ENST00000496050 579 ntTSL 4 BASIC2.53□□□□□ -2
HDGFL3Q9Y3E1 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC2.53□□□□□ -2
HDGFL3Q9Y3E1 AC104057.1-201ENST00000515547 497 ntBASIC2.53□□□□□ -2
HDGFL3Q9Y3E1 SNORA9.3-201ENST00000516383 129 ntBASIC2.53□□□□□ -2
HDGFL3Q9Y3E1 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC2.53□□□□□ -2
HDGFL3Q9Y3E1 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC2.53□□□□□ -2
HDGFL3Q9Y3E1 AC092470.1-201ENST00000546187 132 ntBASIC2.53□□□□□ -2
HDGFL3Q9Y3E1 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC2.53□□□□□ -2
HDGFL3Q9Y3E1 MIR3605-201ENST00000583214 100 ntBASIC2.53□□□□□ -2
HDGFL3Q9Y3E1 AP001029.3-201ENST00000588063 596 ntBASIC2.53□□□□□ -2
HDGFL3Q9Y3E1 AL451007.1-201ENST00000595491 289 ntBASIC2.53□□□□□ -2
HDGFL3Q9Y3E1 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC2.53□□□□□ -2
HDGFL3Q9Y3E1 AC005000.2-201ENST00000605468 310 ntBASIC2.53□□□□□ -2
HDGFL3Q9Y3E1 AC135507.2-201ENST00000612443 309 ntBASIC2.53□□□□□ -2
HDGFL3Q9Y3E1 AL355493.4-201ENST00000618530 292 ntBASIC2.53□□□□□ -2
HDGFL3Q9Y3E1 AC024595.1-201ENST00000623088 387 ntBASIC2.53□□□□□ -2
HDGFL3Q9Y3E1 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC2.53□□□□□ -2
HDGFL3Q9Y3E1 MAPK10-266ENST00000641066 6555 ntBASIC2.53□□□□□ -2
HDGFL3Q9Y3E1 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.53□□□□□ -2
HDGFL3Q9Y3E1 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2.01
HDGFL3Q9Y3E1 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
HDGFL3Q9Y3E1 ZNF807-201ENST00000328088 1707 ntBASIC2.52□□□□□ -2.01
HDGFL3Q9Y3E1 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC2.52□□□□□ -2.01
HDGFL3Q9Y3E1 RNU6-1226P-201ENST00000384317 107 ntBASIC2.52□□□□□ -2.01
HDGFL3Q9Y3E1 TAF9BP2-201ENST00000400856 499 ntBASIC2.52□□□□□ -2.01
HDGFL3Q9Y3E1 SSXP10-201ENST00000402595 565 ntBASIC2.52□□□□□ -2.01
HDGFL3Q9Y3E1 ZNF736P10Y-201ENST00000403990 1110 ntBASIC2.52□□□□□ -2.01
HDGFL3Q9Y3E1 RNU4-78P-201ENST00000410940 126 ntBASIC2.52□□□□□ -2.01
HDGFL3Q9Y3E1 AC096664.2-201ENST00000411843 406 ntBASIC2.52□□□□□ -2.01
HDGFL3Q9Y3E1 RPL7P10-201ENST00000417407 739 ntBASIC2.52□□□□□ -2.01
HDGFL3Q9Y3E1 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC2.52□□□□□ -2.01
HDGFL3Q9Y3E1 AC006548.1-201ENST00000427470 102 ntBASIC2.52□□□□□ -2.01
HDGFL3Q9Y3E1 AC104332.2-201ENST00000429959 156 ntBASIC2.52□□□□□ -2.01
HDGFL3Q9Y3E1 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.52□□□□□ -2.01
HDGFL3Q9Y3E1 AC112653.1-201ENST00000443851 386 ntBASIC2.52□□□□□ -2.01
HDGFL3Q9Y3E1 snoU13.4-201ENST00000458916 104 ntBASIC2.52□□□□□ -2.01
HDGFL3Q9Y3E1 AC080014.1-201ENST00000496877 1201 ntBASIC2.52□□□□□ -2.01
HDGFL3Q9Y3E1 OR52A4P-203ENST00000498233 1014 ntBASIC2.52□□□□□ -2.01
HDGFL3Q9Y3E1 HIGD1AP13-201ENST00000509878 289 ntBASIC2.52□□□□□ -2.01
HDGFL3Q9Y3E1 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.52□□□□□ -2.01
HDGFL3Q9Y3E1 MTCO3P44-201ENST00000510977 541 ntBASIC2.52□□□□□ -2.01
HDGFL3Q9Y3E1 AC105914.1-201ENST00000511798 226 ntBASIC2.52□□□□□ -2.01
HDGFL3Q9Y3E1 LEF1-218ENST00000512172 598 ntTSL 2 BASIC2.52□□□□□ -2.01
HDGFL3Q9Y3E1 RNU6-488P-201ENST00000515918 99 ntBASIC2.52□□□□□ -2.01
HDGFL3Q9Y3E1 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC2.52□□□□□ -2.01
HDGFL3Q9Y3E1 PTK2-220ENST00000520151 573 ntTSL 4 BASIC2.52□□□□□ -2.01
HDGFL3Q9Y3E1 AC019227.1-201ENST00000526902 510 ntBASIC2.52□□□□□ -2.01
HDGFL3Q9Y3E1 AC027104.1-201ENST00000563702 681 ntBASIC2.52□□□□□ -2.01
HDGFL3Q9Y3E1 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC2.52□□□□□ -2.01
HDGFL3Q9Y3E1 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC2.52□□□□□ -2.01
HDGFL3Q9Y3E1 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC2.52□□□□□ -2.01
HDGFL3Q9Y3E1 ZNF861P-201ENST00000588126 639 ntBASIC2.52□□□□□ -2.01
HDGFL3Q9Y3E1 AC073387.2-201ENST00000604797 784 ntBASIC2.52□□□□□ -2.01
HDGFL3Q9Y3E1 AC008277.2-201ENST00000605196 797 ntBASIC2.52□□□□□ -2.01
HDGFL3Q9Y3E1 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC2.52□□□□□ -2.01
HDGFL3Q9Y3E1 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC2.52□□□□□ -2.01
HDGFL3Q9Y3E1 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC2.52□□□□□ -2.01
HDGFL3Q9Y3E1 AC090617.7-201ENST00000623952 126 ntBASIC2.52□□□□□ -2.01
HDGFL3Q9Y3E1 CR381572.1-201ENST00000625098 102 ntBASIC2.52□□□□□ -2.01
HDGFL3Q9Y3E1 AC017104.5-201ENST00000637647 639 ntBASIC2.52□□□□□ -2.01
HDGFL3Q9Y3E1 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.52□□□□□ -2.01
HDGFL3Q9Y3E1 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC2.51□□□□□ -2.01
HDGFL3Q9Y3E1 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.51□□□□□ -2.01
HDGFL3Q9Y3E1 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
HDGFL3Q9Y3E1 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC2.51□□□□□ -2.01
HDGFL3Q9Y3E1 AC007342.9-201ENST00000623877 1385 ntBASIC2.51□□□□□ -2.01
HDGFL3Q9Y3E1 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.51□□□□□ -2.01
HDGFL3Q9Y3E1 AL355596.1-201ENST00000565399 3996 ntBASIC2.51□□□□□ -2.01
HDGFL3Q9Y3E1 RNU6-339P-201ENST00000384310 107 ntBASIC2.51□□□□□ -2.01
HDGFL3Q9Y3E1 HSFY1P1-201ENST00000423928 1178 ntBASIC2.51□□□□□ -2.01
HDGFL3Q9Y3E1 UBE2D3P2-201ENST00000424409 445 ntBASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms